Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13075 and ABID97_RS13080 are separated by 246 nucleotides ABID97_RS13080 and ABID97_RS13085 are separated by 18 nucleotides
ABID97_RS13075: ABID97_RS13075 - glycoside hydrolase family 5 protein, at 2,720,978 to 2,722,126
_RS13075
ABID97_RS13080: ABID97_RS13080 - serine hydrolase domain-containing protein, at 2,722,373 to 2,724,289
_RS13080
ABID97_RS13085: ABID97_RS13085 - mandelate racemase/muconate lactonizing enzyme family protein, at 2,724,308 to 2,725,396
_RS13085
Position (kb)
2722
2723
2724
2725 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2721.659 kb on + strand, within ABID97_RS13075 at 2721.660 kb on - strand, within ABID97_RS13075 at 2721.801 kb on + strand, within ABID97_RS13075 at 2721.834 kb on + strand, within ABID97_RS13075 at 2721.835 kb on - strand, within ABID97_RS13075 at 2721.923 kb on - strand, within ABID97_RS13075 at 2722.243 kb on + strand at 2722.905 kb on - strand, within ABID97_RS13080 at 2723.009 kb on + strand, within ABID97_RS13080 at 2723.138 kb on + strand, within ABID97_RS13080 at 2723.286 kb on - strand, within ABID97_RS13080 at 2723.286 kb on - strand, within ABID97_RS13080 at 2723.687 kb on + strand, within ABID97_RS13080 at 2723.688 kb on - strand, within ABID97_RS13080 at 2723.688 kb on - strand, within ABID97_RS13080 at 2723.837 kb on + strand, within ABID97_RS13080 at 2723.850 kb on - strand, within ABID97_RS13080 at 2723.882 kb on + strand, within ABID97_RS13080 at 2723.882 kb on + strand, within ABID97_RS13080 at 2723.883 kb on - strand, within ABID97_RS13080 at 2723.919 kb on - strand, within ABID97_RS13080 at 2724.095 kb on + strand, within ABID97_RS13080 at 2724.095 kb on + strand, within ABID97_RS13080 at 2724.096 kb on + strand, within ABID97_RS13080 at 2724.096 kb on - strand, within ABID97_RS13080 at 2724.097 kb on + strand, within ABID97_RS13080 at 2724.097 kb on + strand, within ABID97_RS13080 at 2724.453 kb on - strand, within ABID97_RS13085 at 2724.459 kb on - strand, within ABID97_RS13085 at 2724.716 kb on + strand, within ABID97_RS13085 at 2724.716 kb on + strand, within ABID97_RS13085 at 2725.289 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,721,659 + ABID97_RS13075 0.59 +0.1 2,721,660 - ABID97_RS13075 0.59 -0.4 2,721,801 + ABID97_RS13075 0.72 +0.1 2,721,834 + ABID97_RS13075 0.74 +0.2 2,721,835 - ABID97_RS13075 0.75 -0.2 2,721,923 - ABID97_RS13075 0.82 -0.8 2,722,243 + +0.7 2,722,905 - ABID97_RS13080 0.28 -1.7 2,723,009 + ABID97_RS13080 0.33 -0.2 2,723,138 + ABID97_RS13080 0.40 -1.3 2,723,286 - ABID97_RS13080 0.48 -0.6 2,723,286 - ABID97_RS13080 0.48 +0.6 2,723,687 + ABID97_RS13080 0.69 +0.5 2,723,688 - ABID97_RS13080 0.69 -1.3 2,723,688 - ABID97_RS13080 0.69 +0.4 2,723,837 + ABID97_RS13080 0.76 +0.4 2,723,850 - ABID97_RS13080 0.77 -0.8 2,723,882 + ABID97_RS13080 0.79 -1.3 2,723,882 + ABID97_RS13080 0.79 -0.8 2,723,883 - ABID97_RS13080 0.79 -0.3 2,723,919 - ABID97_RS13080 0.81 +3.5 2,724,095 + ABID97_RS13080 0.90 -0.3 2,724,095 + ABID97_RS13080 0.90 +0.2 2,724,096 + ABID97_RS13080 0.90 +0.9 2,724,096 - ABID97_RS13080 0.90 -0.3 2,724,097 + ABID97_RS13080 0.90 -0.8 2,724,097 + ABID97_RS13080 0.90 -0.2 2,724,453 - ABID97_RS13085 0.13 -1.3 2,724,459 - ABID97_RS13085 0.14 -0.3 2,724,716 + ABID97_RS13085 0.37 -0.1 2,724,716 + ABID97_RS13085 0.37 -0.1 2,725,289 + +1.5
Or see this region's nucleotide sequence