Strain Fitness in Pseudomonas simiae WCS417 around PS417_21605

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
4,688,133	+		PS417_21595	0.81	-0.5
4,688,162	+		PS417_21595	0.87	-0.3
4,688,162	+		PS417_21595	0.87	-0.3
4,688,242	+				+0.1
4,688,242	+				-0.3
4,688,242	+				+0.2
4,688,242	+				-0.2
4,688,288	-				-1.3
4,688,288	-				-0.6
4,688,293	+				+1.1
4,688,294	-				+0.3
4,688,294	-				-0.0
4,688,294	-				-0.0
4,688,332	+				-1.1
4,688,468	+		PS417_21600	0.20	-0.2
4,688,589	+		PS417_21600	0.36	+0.2
4,688,651	+		PS417_21600	0.44	+0.1
4,688,651	+		PS417_21600	0.44	+0.2
4,688,651	+		PS417_21600	0.44	-0.6
4,688,651	+		PS417_21600	0.44	-0.3
4,688,652	-				+0.3
4,688,652	-		PS417_21600	0.45	-0.7
4,688,681	+				+2.1
4,688,682	-		PS417_21600	0.49	+0.2
4,688,770	+		PS417_21600	0.60	-0.1
4,688,861	+		PS417_21600	0.72	+0.5
4,688,862	-		PS417_21600	0.73	-0.3
4,689,018	-				-0.3
4,689,066	-				+1.3
4,689,073	-				-0.4
4,689,445	-		PS417_21605	0.23	+0.8
4,689,516	+		PS417_21605	0.28	-0.1
4,689,844	-		PS417_21605	0.52	+0.2
4,690,095	+		PS417_21605	0.70	-0.1
4,690,095	+		PS417_21605	0.70	+0.7
4,690,108	+		PS417_21605	0.71	-0.0
4,690,108	+		PS417_21605	0.71	-0.1
4,690,108	+		PS417_21605	0.71	+0.3
4,690,109	-				-0.3
4,690,109	-		PS417_21605	0.71	+0.1
4,690,109	-		PS417_21605	0.71	-0.3
4,690,109	-		PS417_21605	0.71	+0.4
4,690,179	+		PS417_21605	0.76	+0.2
4,690,179	+		PS417_21605	0.76	+0.9
4,690,179	+		PS417_21605	0.76	-0.0
4,690,179	+		PS417_21605	0.76	-0.2
4,690,180	-		PS417_21605	0.76	-0.4
4,690,180	-		PS417_21605	0.76	+0.5
4,690,180	-		PS417_21605	0.76	-0.5
4,690,180	-		PS417_21605	0.76	-0.2
4,690,293	+		PS417_21605	0.84	+0.3
4,690,294	-		PS417_21605	0.84	-0.2
4,690,303	+		PS417_21605	0.85	-0.1
4,690,303	+		PS417_21605	0.85	+1.1
4,690,363	-		PS417_21605	0.89	+0.4
4,690,431	+				+0.3
4,690,431	+				+1.4
4,690,432	-				-0.1
4,690,432	-				-0.1
4,690,432	-				-1.1
4,690,435	+				+0.4
4,690,435	+				+0.2
4,690,479	+				-0.4
4,690,480	-				+0.1
4,690,563	+				+0.2
4,690,563	+				+0.3
4,690,563	+				-0.2
4,690,563	+				-0.3
4,690,614	+				+0.9
4,690,669	+				+1.0
4,690,670	-				-0.1
4,690,672	-				-0.3
4,690,672	-				+0.2
4,690,675	+				+0.9
4,690,780	-				-0.6
4,690,780	-				-1.2
4,690,780	-				+1.3
4,690,956	+				+0.9
4,690,964	+				+0.0
4,691,109	+				+0.1
4,691,110	-				-0.5
4,691,358	-		PS417_21615	0.76	-0.2