Strain Fitness in Pseudomonas simiae WCS417 around PS417_05680

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,275,955	-				-0.5
1,275,955	-				+0.3
1,276,225	+				+0.1
1,276,794	-				-0.3
1,276,810	+				+0.1
1,276,811	-				-0.5
1,276,817	-				+0.2
1,276,817	-				-0.3
1,276,837	+				-0.2
1,276,837	+				+0.6
1,276,837	+				-0.6
1,276,838	-				+1.0
1,277,115	+		PS417_05680	0.12	-0.5
1,277,115	+		PS417_05680	0.12	+0.3
1,277,136	-		PS417_05680	0.12	-0.3
1,277,237	-		PS417_05680	0.16	+0.5
1,277,388	-		PS417_05680	0.22	-0.1
1,277,530	+		PS417_05680	0.28	+1.4
1,277,530	+		PS417_05680	0.28	+0.1
1,277,530	+		PS417_05680	0.28	+0.4
1,277,531	-		PS417_05680	0.28	+0.6
1,277,531	-		PS417_05680	0.28	-0.7
1,277,541	-		PS417_05680	0.28	+0.5
1,277,634	+		PS417_05680	0.32	-0.2
1,277,634	+		PS417_05680	0.32	+1.2
1,277,634	+		PS417_05680	0.32	-0.1
1,277,736	+		PS417_05680	0.36	-0.4
1,277,736	+		PS417_05680	0.36	+0.3
1,277,736	+		PS417_05680	0.36	+0.1
1,277,736	+		PS417_05680	0.36	-0.2
1,277,736	+		PS417_05680	0.36	-0.4
1,277,737	-		PS417_05680	0.36	-0.4
1,277,737	-		PS417_05680	0.36	+0.2
1,277,895	-		PS417_05680	0.42	-0.4
1,277,998	+		PS417_05680	0.46	+0.1
1,278,324	-		PS417_05680	0.58	+0.3
1,278,419	+		PS417_05680	0.62	-1.1
1,278,419	+		PS417_05680	0.62	+0.1
1,278,419	+		PS417_05680	0.62	+0.3
1,278,419	+		PS417_05680	0.62	+0.1
1,278,420	-		PS417_05680	0.62	+1.9
1,278,423	-		PS417_05680	0.62	-0.0
1,278,677	-		PS417_05680	0.72	+0.1
1,279,062	-		PS417_05680	0.87	+0.9
1,279,168	+				-0.0
1,279,169	-				-0.0
1,279,283	-				-0.0
1,279,294	+				+0.8
1,279,313	-				-0.3
1,279,354	+				-0.1
1,279,401	-				-0.3
1,279,487	+				+2.0
1,279,529	-				-0.1
1,279,529	-				-0.4
1,279,567	+				+0.0
1,279,567	+				+0.2
1,279,567	+				+0.7
1,279,568	-				+0.4
1,279,568	-				+0.1
1,279,578	-				+0.3
1,279,659	+		PS417_05685	0.22	+0.2
1,279,660	-		PS417_05685	0.23	+0.5
1,279,665	+		PS417_05685	0.24	-0.6
1,279,666	-		PS417_05685	0.24	+0.3
1,279,706	+		PS417_05685	0.35	-0.4
1,279,706	+		PS417_05685	0.35	+0.0
1,279,707	-		PS417_05685	0.35	+0.3
1,279,735	+		PS417_05685	0.43	+0.0
1,279,736	-		PS417_05685	0.43	+0.4
1,279,736	-		PS417_05685	0.43	+0.1
1,279,791	-				-0.6
1,280,083	-		PS417_05690	0.29	-0.0
1,280,087	-		PS417_05690	0.30	+0.3
1,280,087	-		PS417_05690	0.30	+0.4
1,280,118	+		PS417_05690	0.36	+0.8
1,280,118	+		PS417_05690	0.36	+0.1
1,280,119	-		PS417_05690	0.37	+0.5
1,280,119	-		PS417_05690	0.37	+0.0
1,280,119	-		PS417_05690	0.37	+0.3
1,280,119	-		PS417_05690	0.37	-1.0
1,280,119	-		PS417_05690	0.37	-0.3
1,280,119	-		PS417_05690	0.37	+0.5
1,280,177	-		PS417_05690	0.48	-0.4
1,280,325	+		PS417_05690	0.79	+0.1
1,280,326	-		PS417_05690	0.79	-0.4