Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS26550 and ABID97_RS26555 are separated by 43 nucleotides ABID97_RS26555 and ABID97_RS26560 are separated by 19 nucleotides ABID97_RS26560 and ABID97_RS26565 are separated by 30 nucleotides
ABID97_RS26550: ABID97_RS26550 - NADP-dependent malic enzyme, at 230,326 to 232,611
_RS26550
ABID97_RS26555: ABID97_RS26555 - lipoyl synthase, at 232,655 to 233,572
_RS26555
ABID97_RS26560: ABID97_RS26560 - dicarboxylate/amino acid:cation symporter, at 233,592 to 234,938
_RS26560
ABID97_RS26565: ABID97_RS26565 - NAD(P)/FAD-dependent oxidoreductase, at 234,969 to 236,303
_RS26565
Position (kb) 233
234
235 Strain fitness (log2 ratio) -1
0
1 at 232.997 kb on + strand, within ABID97_RS26555 at 232.997 kb on + strand, within ABID97_RS26555 at 232.997 kb on + strand, within ABID97_RS26555 at 232.997 kb on + strand, within ABID97_RS26555 at 233.241 kb on - strand, within ABID97_RS26555 at 233.441 kb on + strand, within ABID97_RS26555 at 233.625 kb on + strand at 233.688 kb on + strand at 233.967 kb on + strand, within ABID97_RS26560 at 234.180 kb on + strand, within ABID97_RS26560
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 232,997 + ABID97_RS26555 0.37 +1.1 232,997 + ABID97_RS26555 0.37 -1.0 232,997 + ABID97_RS26555 0.37 -0.8 232,997 + ABID97_RS26555 0.37 +0.1 233,241 - ABID97_RS26555 0.64 +1.0 233,441 + ABID97_RS26555 0.86 -0.7 233,625 + +0.1 233,688 + -1.5 233,967 + ABID97_RS26560 0.28 +0.9 234,180 + ABID97_RS26560 0.44 +0.3
Or see this region's nucleotide sequence