Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14200 and ABID97_RS14205 are separated by 150 nucleotides ABID97_RS14205 and ABID97_RS14210 are separated by 19 nucleotides ABID97_RS14210 and ABID97_RS14215 are separated by 4 nucleotides ABID97_RS14215 and ABID97_RS14220 overlap by 8 nucleotides
ABID97_RS14200: ABID97_RS14200 - pseudouridine synthase, at 2,953,528 to 2,955,336
_RS14200
ABID97_RS14205: ABID97_RS14205 - nucleoside-diphosphate kinase, at 2,955,487 to 2,955,912
_RS14205
ABID97_RS14210: ABID97_RS14210 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 2,955,932 to 2,957,083
_RS14210
ABID97_RS14215: ABID97_RS14215 - type IV pilus biogenesis/stability protein PilW, at 2,957,088 to 2,957,942
_RS14215
ABID97_RS14220: ABID97_RS14220 - helix-turn-helix domain-containing protein, at 2,957,935 to 2,958,909
_RS14220
Position (kb)
2955
2956
2957
2958 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2955.111 kb on + strand, within ABID97_RS14200 at 2955.112 kb on - strand, within ABID97_RS14200 at 2955.112 kb on - strand, within ABID97_RS14200 at 2955.901 kb on + strand at 2955.901 kb on + strand at 2956.213 kb on - strand, within ABID97_RS14210 at 2956.445 kb on + strand, within ABID97_RS14210 at 2956.445 kb on + strand, within ABID97_RS14210 at 2956.445 kb on + strand, within ABID97_RS14210 at 2956.445 kb on + strand, within ABID97_RS14210 at 2956.445 kb on + strand, within ABID97_RS14210 at 2956.493 kb on + strand, within ABID97_RS14210 at 2956.493 kb on + strand, within ABID97_RS14210 at 2956.646 kb on + strand, within ABID97_RS14210 at 2956.682 kb on + strand, within ABID97_RS14210 at 2957.415 kb on + strand, within ABID97_RS14215 at 2957.415 kb on + strand, within ABID97_RS14215 at 2957.416 kb on - strand, within ABID97_RS14215 at 2957.416 kb on - strand, within ABID97_RS14215 at 2957.416 kb on - strand, within ABID97_RS14215 at 2957.416 kb on - strand, within ABID97_RS14215 at 2957.416 kb on - strand, within ABID97_RS14215 at 2957.505 kb on + strand, within ABID97_RS14215 at 2957.584 kb on - strand, within ABID97_RS14215 at 2957.676 kb on + strand, within ABID97_RS14215 at 2957.677 kb on - strand, within ABID97_RS14215 at 2957.677 kb on - strand, within ABID97_RS14215 at 2957.911 kb on + strand at 2957.912 kb on - strand at 2957.916 kb on + strand at 2957.917 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,955,111 + ABID97_RS14200 0.88 -1.0 2,955,112 - ABID97_RS14200 0.88 -1.7 2,955,112 - ABID97_RS14200 0.88 -1.4 2,955,901 + +1.3 2,955,901 + -0.6 2,956,213 - ABID97_RS14210 0.24 -0.2 2,956,445 + ABID97_RS14210 0.45 +0.2 2,956,445 + ABID97_RS14210 0.45 +1.9 2,956,445 + ABID97_RS14210 0.45 -0.2 2,956,445 + ABID97_RS14210 0.45 -0.8 2,956,445 + ABID97_RS14210 0.45 -1.6 2,956,493 + ABID97_RS14210 0.49 -0.9 2,956,493 + ABID97_RS14210 0.49 -1.3 2,956,646 + ABID97_RS14210 0.62 +0.1 2,956,682 + ABID97_RS14210 0.65 -0.8 2,957,415 + ABID97_RS14215 0.38 +2.8 2,957,415 + ABID97_RS14215 0.38 +0.5 2,957,416 - ABID97_RS14215 0.38 +2.2 2,957,416 - ABID97_RS14215 0.38 +2.1 2,957,416 - ABID97_RS14215 0.38 +2.5 2,957,416 - ABID97_RS14215 0.38 +3.2 2,957,416 - ABID97_RS14215 0.38 +1.1 2,957,505 + ABID97_RS14215 0.49 +0.4 2,957,584 - ABID97_RS14215 0.58 +1.1 2,957,676 + ABID97_RS14215 0.69 +0.5 2,957,677 - ABID97_RS14215 0.69 +1.3 2,957,677 - ABID97_RS14215 0.69 +1.9 2,957,911 + +2.0 2,957,912 - +0.7 2,957,916 + +1.0 2,957,917 - +2.2
Or see this region's nucleotide sequence