Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS11650 and ABID97_RS11655 are separated by 81 nucleotides ABID97_RS11655 and ABID97_RS11660 are separated by 481 nucleotides
ABID97_RS11650: ABID97_RS11650 - carbon-nitrogen hydrolase family protein, at 2,406,499 to 2,407,419
_RS11650
ABID97_RS11655: ABID97_RS11655 - LysR family transcriptional regulator, at 2,407,501 to 2,408,421
_RS11655
ABID97_RS11660: ABID97_RS11660 - ABC transporter substrate-binding protein, at 2,408,903 to 2,410,468
_RS11660
Position (kb)
2407
2408
2409 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2406.604 kb on + strand, within ABID97_RS11650 at 2406.838 kb on - strand, within ABID97_RS11650 at 2406.887 kb on + strand, within ABID97_RS11650 at 2406.887 kb on + strand, within ABID97_RS11650 at 2406.887 kb on + strand, within ABID97_RS11650 at 2406.887 kb on + strand, within ABID97_RS11650 at 2406.888 kb on - strand, within ABID97_RS11650 at 2406.888 kb on - strand, within ABID97_RS11650 at 2407.039 kb on - strand, within ABID97_RS11650 at 2407.089 kb on + strand, within ABID97_RS11650 at 2407.090 kb on - strand, within ABID97_RS11650 at 2407.196 kb on + strand, within ABID97_RS11650 at 2407.196 kb on + strand, within ABID97_RS11650 at 2407.197 kb on - strand, within ABID97_RS11650 at 2407.197 kb on - strand, within ABID97_RS11650 at 2407.199 kb on + strand, within ABID97_RS11650 at 2407.324 kb on - strand, within ABID97_RS11650 at 2407.444 kb on - strand at 2407.561 kb on + strand at 2407.652 kb on - strand, within ABID97_RS11655 at 2407.652 kb on - strand, within ABID97_RS11655 at 2407.976 kb on + strand, within ABID97_RS11655 at 2408.044 kb on + strand, within ABID97_RS11655 at 2408.044 kb on + strand, within ABID97_RS11655 at 2408.045 kb on - strand, within ABID97_RS11655 at 2408.045 kb on - strand, within ABID97_RS11655 at 2408.081 kb on - strand, within ABID97_RS11655 at 2408.419 kb on + strand at 2408.566 kb on + strand at 2408.566 kb on + strand at 2408.566 kb on + strand at 2408.567 kb on - strand at 2408.567 kb on - strand at 2408.570 kb on + strand at 2408.570 kb on + strand at 2408.571 kb on - strand at 2408.694 kb on - strand at 2408.748 kb on + strand at 2408.749 kb on - strand at 2408.758 kb on - strand at 2408.837 kb on + strand at 2408.837 kb on + strand at 2408.838 kb on - strand at 2408.884 kb on - strand at 2409.110 kb on + strand, within ABID97_RS11660
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,406,604 + ABID97_RS11650 0.11 -0.4 2,406,838 - ABID97_RS11650 0.37 -0.2 2,406,887 + ABID97_RS11650 0.42 -0.3 2,406,887 + ABID97_RS11650 0.42 +0.5 2,406,887 + ABID97_RS11650 0.42 -0.6 2,406,887 + ABID97_RS11650 0.42 +0.5 2,406,888 - ABID97_RS11650 0.42 -1.5 2,406,888 - ABID97_RS11650 0.42 +0.1 2,407,039 - ABID97_RS11650 0.59 +0.2 2,407,089 + ABID97_RS11650 0.64 +0.6 2,407,090 - ABID97_RS11650 0.64 +0.2 2,407,196 + ABID97_RS11650 0.76 -1.8 2,407,196 + ABID97_RS11650 0.76 +0.2 2,407,197 - ABID97_RS11650 0.76 -0.6 2,407,197 - ABID97_RS11650 0.76 -0.2 2,407,199 + ABID97_RS11650 0.76 +0.2 2,407,324 - ABID97_RS11650 0.90 +1.8 2,407,444 - -0.4 2,407,561 + +0.7 2,407,652 - ABID97_RS11655 0.16 -0.1 2,407,652 - ABID97_RS11655 0.16 +0.4 2,407,976 + ABID97_RS11655 0.52 -0.2 2,408,044 + ABID97_RS11655 0.59 +0.2 2,408,044 + ABID97_RS11655 0.59 +0.8 2,408,045 - ABID97_RS11655 0.59 -0.2 2,408,045 - ABID97_RS11655 0.59 +0.3 2,408,081 - ABID97_RS11655 0.63 -0.1 2,408,419 + -0.3 2,408,566 + +0.2 2,408,566 + -1.6 2,408,566 + +0.5 2,408,567 - -0.2 2,408,567 - +2.2 2,408,570 + +0.3 2,408,570 + +0.0 2,408,571 - -0.0 2,408,694 - +0.4 2,408,748 + +0.5 2,408,749 - -0.3 2,408,758 - -1.1 2,408,837 + -0.2 2,408,837 + -0.3 2,408,838 - +0.2 2,408,884 - -0.2 2,409,110 + ABID97_RS11660 0.13 +0.8
Or see this region's nucleotide sequence