Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2401

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2399 and B158DRAFT_2400 are separated by 37 nucleotidesB158DRAFT_2400 and B158DRAFT_2401 are separated by 138 nucleotidesB158DRAFT_2401 and B158DRAFT_2402 are separated by 262 nucleotidesB158DRAFT_2402 and B158DRAFT_2403 are separated by 179 nucleotides B158DRAFT_2399: B158DRAFT_2399 - Obg family GTPase CgtA, at 570,238 to 571,509 _2399 B158DRAFT_2400: B158DRAFT_2400 - Uncharacterized conserved protein, at 571,547 to 572,089 _2400 B158DRAFT_2401: B158DRAFT_2401 - Protein of unknown function (DUF1329)., at 572,228 to 573,580 _2401 B158DRAFT_2402: B158DRAFT_2402 - Transcriptional regulators, at 573,843 to 574,283 _2402 B158DRAFT_2403: B158DRAFT_2403 - ribosomal protein S20, at 574,463 to 574,723 _2403 Position (kb) 572 573 574Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 571.294 kb on + strand, within B158DRAFT_2399at 571.302 kb on - strand, within B158DRAFT_2399at 571.342 kb on + strand, within B158DRAFT_2399at 571.473 kb on + strandat 571.595 kb on + strandat 571.595 kb on + strandat 571.595 kb on + strandat 571.615 kb on + strand, within B158DRAFT_2400at 571.618 kb on - strand, within B158DRAFT_2400at 571.623 kb on - strand, within B158DRAFT_2400at 571.733 kb on + strand, within B158DRAFT_2400at 571.733 kb on + strand, within B158DRAFT_2400at 571.836 kb on + strand, within B158DRAFT_2400at 571.975 kb on + strand, within B158DRAFT_2400at 572.118 kb on - strandat 572.157 kb on + strandat 572.157 kb on + strandat 572.163 kb on - strandat 572.165 kb on - strandat 572.165 kb on - strandat 572.165 kb on - strandat 572.165 kb on - strandat 572.194 kb on + strandat 572.196 kb on + strandat 572.202 kb on - strandat 572.202 kb on - strandat 572.242 kb on - strandat 572.281 kb on - strandat 572.312 kb on + strandat 572.359 kb on + strandat 572.375 kb on - strand, within B158DRAFT_2401at 572.411 kb on - strand, within B158DRAFT_2401at 572.421 kb on + strand, within B158DRAFT_2401at 572.421 kb on + strand, within B158DRAFT_2401at 572.421 kb on + strand, within B158DRAFT_2401at 572.429 kb on - strand, within B158DRAFT_2401at 572.431 kb on - strand, within B158DRAFT_2401at 572.455 kb on + strand, within B158DRAFT_2401at 572.525 kb on + strand, within B158DRAFT_2401at 572.552 kb on - strand, within B158DRAFT_2401at 572.576 kb on + strand, within B158DRAFT_2401at 572.578 kb on - strand, within B158DRAFT_2401at 572.583 kb on - strand, within B158DRAFT_2401at 572.584 kb on - strand, within B158DRAFT_2401at 572.590 kb on + strand, within B158DRAFT_2401at 572.603 kb on - strand, within B158DRAFT_2401at 572.623 kb on + strand, within B158DRAFT_2401at 572.623 kb on - strand, within B158DRAFT_2401at 572.628 kb on + strand, within B158DRAFT_2401at 572.636 kb on - strand, within B158DRAFT_2401at 572.636 kb on - strand, within B158DRAFT_2401at 572.803 kb on + strand, within B158DRAFT_2401at 572.816 kb on + strand, within B158DRAFT_2401at 572.853 kb on - strand, within B158DRAFT_2401at 572.855 kb on + strand, within B158DRAFT_2401at 572.898 kb on + strand, within B158DRAFT_2401at 572.927 kb on - strand, within B158DRAFT_2401at 572.948 kb on - strand, within B158DRAFT_2401at 572.958 kb on - strand, within B158DRAFT_2401at 572.979 kb on + strand, within B158DRAFT_2401at 572.989 kb on + strand, within B158DRAFT_2401at 572.989 kb on + strand, within B158DRAFT_2401at 572.997 kb on + strand, within B158DRAFT_2401at 573.007 kb on + strand, within B158DRAFT_2401at 573.012 kb on + strand, within B158DRAFT_2401at 573.020 kb on - strand, within B158DRAFT_2401at 573.020 kb on - strand, within B158DRAFT_2401at 573.054 kb on - strand, within B158DRAFT_2401at 573.060 kb on - strand, within B158DRAFT_2401at 573.087 kb on - strand, within B158DRAFT_2401at 573.111 kb on + strand, within B158DRAFT_2401at 573.118 kb on - strand, within B158DRAFT_2401at 573.123 kb on + strand, within B158DRAFT_2401at 573.128 kb on + strand, within B158DRAFT_2401at 573.131 kb on - strand, within B158DRAFT_2401at 573.136 kb on - strand, within B158DRAFT_2401at 573.141 kb on - strand, within B158DRAFT_2401at 573.194 kb on - strand, within B158DRAFT_2401at 573.220 kb on + strand, within B158DRAFT_2401at 573.228 kb on - strand, within B158DRAFT_2401at 573.230 kb on - strand, within B158DRAFT_2401at 573.231 kb on + strand, within B158DRAFT_2401at 573.231 kb on + strand, within B158DRAFT_2401at 573.231 kb on + strand, within B158DRAFT_2401at 573.239 kb on - strand, within B158DRAFT_2401at 573.306 kb on + strand, within B158DRAFT_2401at 573.314 kb on - strand, within B158DRAFT_2401at 573.370 kb on - strand, within B158DRAFT_2401at 573.383 kb on - strand, within B158DRAFT_2401at 573.388 kb on - strand, within B158DRAFT_2401at 573.397 kb on + strand, within B158DRAFT_2401at 573.402 kb on + strand, within B158DRAFT_2401at 573.410 kb on - strand, within B158DRAFT_2401at 573.418 kb on + strand, within B158DRAFT_2401at 573.468 kb on + strandat 573.468 kb on + strandat 573.473 kb on + strandat 573.473 kb on + strandat 573.476 kb on - strandat 573.476 kb on - strandat 573.476 kb on - strandat 573.485 kb on + strandat 573.485 kb on + strandat 573.493 kb on - strandat 573.547 kb on - strandat 573.625 kb on + strandat 573.975 kb on + strand, within B158DRAFT_2402at 573.993 kb on - strand, within B158DRAFT_2402at 574.018 kb on - strand, within B158DRAFT_2402at 574.028 kb on + strand, within B158DRAFT_2402at 574.029 kb on - strand, within B158DRAFT_2402at 574.036 kb on - strand, within B158DRAFT_2402at 574.049 kb on - strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.144 kb on - strand, within B158DRAFT_2402at 574.207 kb on + strand, within B158DRAFT_2402at 574.215 kb on + strand, within B158DRAFT_2402at 574.215 kb on - strand, within B158DRAFT_2402at 574.249 kb on - strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.346 kb on - strandat 574.346 kb on - strandat 574.429 kb on + strandat 574.478 kb on - strandat 574.478 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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571,294 + B158DRAFT_2399 0.83 -0.8
571,302 - B158DRAFT_2399 0.84 -0.9
571,342 + B158DRAFT_2399 0.87 -0.7
571,473 + -0.5
571,595 + -0.6
571,595 + -0.3
571,595 + -0.1
571,615 + B158DRAFT_2400 0.13 -0.3
571,618 - B158DRAFT_2400 0.13 +0.8
571,623 - B158DRAFT_2400 0.14 +1.0
571,733 + B158DRAFT_2400 0.34 +0.6
571,733 + B158DRAFT_2400 0.34 +0.0
571,836 + B158DRAFT_2400 0.53 +0.5
571,975 + B158DRAFT_2400 0.79 +0.2
572,118 - -0.2
572,157 + -1.7
572,157 + -1.2
572,163 - +0.4
572,165 - +0.0
572,165 - +1.8
572,165 - -0.8
572,165 - -0.4
572,194 + -2.1
572,196 + -0.4
572,202 - +0.2
572,202 - -0.1
572,242 - -0.9
572,281 - -0.1
572,312 + -0.2
572,359 + -0.6
572,375 - B158DRAFT_2401 0.11 -0.1
572,411 - B158DRAFT_2401 0.14 -0.0
572,421 + B158DRAFT_2401 0.14 -0.1
572,421 + B158DRAFT_2401 0.14 -0.2
572,421 + B158DRAFT_2401 0.14 -1.9
572,429 - B158DRAFT_2401 0.15 +0.0
572,431 - B158DRAFT_2401 0.15 -0.1
572,455 + B158DRAFT_2401 0.17 +0.1
572,525 + B158DRAFT_2401 0.22 -0.5
572,552 - B158DRAFT_2401 0.24 -2.1
572,576 + B158DRAFT_2401 0.26 -0.1
572,578 - B158DRAFT_2401 0.26 -0.1
572,583 - B158DRAFT_2401 0.26 +0.0
572,584 - B158DRAFT_2401 0.26 +0.1
572,590 + B158DRAFT_2401 0.27 -0.1
572,603 - B158DRAFT_2401 0.28 -0.1
572,623 + B158DRAFT_2401 0.29 -0.3
572,623 - B158DRAFT_2401 0.29 +0.3
572,628 + B158DRAFT_2401 0.30 -0.2
572,636 - B158DRAFT_2401 0.30 +0.0
572,636 - B158DRAFT_2401 0.30 +0.6
572,803 + B158DRAFT_2401 0.42 +1.2
572,816 + B158DRAFT_2401 0.43 +0.0
572,853 - B158DRAFT_2401 0.46 -0.1
572,855 + B158DRAFT_2401 0.46 -0.7
572,898 + B158DRAFT_2401 0.50 +0.8
572,927 - B158DRAFT_2401 0.52 +0.0
572,948 - B158DRAFT_2401 0.53 +0.5
572,958 - B158DRAFT_2401 0.54 +0.6
572,979 + B158DRAFT_2401 0.56 -1.3
572,989 + B158DRAFT_2401 0.56 -1.1
572,989 + B158DRAFT_2401 0.56 +0.0
572,997 + B158DRAFT_2401 0.57 -1.1
573,007 + B158DRAFT_2401 0.58 -0.3
573,012 + B158DRAFT_2401 0.58 -1.2
573,020 - B158DRAFT_2401 0.59 -0.5
573,020 - B158DRAFT_2401 0.59 -0.3
573,054 - B158DRAFT_2401 0.61 +0.2
573,060 - B158DRAFT_2401 0.61 -1.2
573,087 - B158DRAFT_2401 0.63 -0.0
573,111 + B158DRAFT_2401 0.65 -0.4
573,118 - B158DRAFT_2401 0.66 -0.3
573,123 + B158DRAFT_2401 0.66 -0.6
573,128 + B158DRAFT_2401 0.67 -1.8
573,131 - B158DRAFT_2401 0.67 +0.3
573,136 - B158DRAFT_2401 0.67 +0.9
573,141 - B158DRAFT_2401 0.67 -0.5
573,194 - B158DRAFT_2401 0.71 +1.1
573,220 + B158DRAFT_2401 0.73 +0.2
573,228 - B158DRAFT_2401 0.74 -0.0
573,230 - B158DRAFT_2401 0.74 +0.2
573,231 + B158DRAFT_2401 0.74 -0.2
573,231 + B158DRAFT_2401 0.74 +0.3
573,231 + B158DRAFT_2401 0.74 -1.5
573,239 - B158DRAFT_2401 0.75 -0.5
573,306 + B158DRAFT_2401 0.80 +0.0
573,314 - B158DRAFT_2401 0.80 -0.9
573,370 - B158DRAFT_2401 0.84 -0.3
573,383 - B158DRAFT_2401 0.85 +1.1
573,388 - B158DRAFT_2401 0.86 -2.0
573,397 + B158DRAFT_2401 0.86 -2.7
573,402 + B158DRAFT_2401 0.87 -0.1
573,410 - B158DRAFT_2401 0.87 -1.4
573,418 + B158DRAFT_2401 0.88 -0.8
573,468 + +1.6
573,468 + -0.2
573,473 + +2.4
573,473 + +1.1
573,476 - -0.3
573,476 - +0.6
573,476 - +0.0
573,485 + -2.9
573,485 + +0.5
573,493 - -0.2
573,547 - +1.0
573,625 + -0.4
573,975 + B158DRAFT_2402 0.30 +0.7
573,993 - B158DRAFT_2402 0.34 +0.5
574,018 - B158DRAFT_2402 0.40 +1.0
574,028 + B158DRAFT_2402 0.42 -0.2
574,029 - B158DRAFT_2402 0.42 -0.0
574,036 - B158DRAFT_2402 0.44 -0.8
574,049 - B158DRAFT_2402 0.47 +0.3
574,118 + B158DRAFT_2402 0.62 -0.0
574,118 + B158DRAFT_2402 0.62 -0.1
574,118 + B158DRAFT_2402 0.62 -0.7
574,118 + B158DRAFT_2402 0.62 -0.6
574,118 + B158DRAFT_2402 0.62 -0.3
574,123 + B158DRAFT_2402 0.63 -0.4
574,123 + B158DRAFT_2402 0.63 -0.6
574,123 + B158DRAFT_2402 0.63 -0.6
574,123 + B158DRAFT_2402 0.63 +1.4
574,126 - B158DRAFT_2402 0.64 +0.2
574,126 - B158DRAFT_2402 0.64 -0.5
574,126 - B158DRAFT_2402 0.64 +0.4
574,131 - B158DRAFT_2402 0.65 -0.6
574,131 - B158DRAFT_2402 0.65 +0.3
574,131 - B158DRAFT_2402 0.65 -0.7
574,131 - B158DRAFT_2402 0.65 -0.7
574,131 - B158DRAFT_2402 0.65 -0.3
574,131 - B158DRAFT_2402 0.65 -0.6
574,131 - B158DRAFT_2402 0.65 -1.3
574,131 - B158DRAFT_2402 0.65 +0.0
574,144 - B158DRAFT_2402 0.68 +0.2
574,207 + B158DRAFT_2402 0.83 -0.5
574,215 + B158DRAFT_2402 0.84 -1.4
574,215 - B158DRAFT_2402 0.84 -0.3
574,249 - +0.8
574,338 + -0.2
574,338 + -0.5
574,338 + -0.4
574,346 - +0.3
574,346 - +0.1
574,429 + -0.5
574,478 - +0.3
574,478 - +2.5

Or see this region's nucleotide sequence