Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2130

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2128 and B158DRAFT_2129 are separated by 157 nucleotidesB158DRAFT_2129 and B158DRAFT_2130 are separated by 112 nucleotidesB158DRAFT_2130 and B158DRAFT_2131 are separated by 277 nucleotides B158DRAFT_2128: B158DRAFT_2128 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108), at 262,619 to 263,533 _2128 B158DRAFT_2129: B158DRAFT_2129 - Protein of unknown function (DUF721)., at 263,691 to 264,011 _2129 B158DRAFT_2130: B158DRAFT_2130 - Membrane proteins related to metalloendopeptidases, at 264,124 to 265,044 _2130 B158DRAFT_2131: B158DRAFT_2131 - preprotein translocase, SecA subunit, at 265,322 to 268,030 _2131 Position (kb) 264 265 266Strain fitness (log2 ratio) -1 0 1 2 3at 263.509 kb on + strandat 263.533 kb on + strandat 263.634 kb on + strandat 263.642 kb on - strandat 263.642 kb on - strandat 263.643 kb on + strandat 264.051 kb on + strandat 264.059 kb on - strandat 264.059 kb on - strandat 264.059 kb on - strandat 264.059 kb on - strandat 264.207 kb on + strandat 264.215 kb on - strandat 264.215 kb on - strandat 264.219 kb on + strand, within B158DRAFT_2130at 264.227 kb on - strand, within B158DRAFT_2130at 264.238 kb on + strand, within B158DRAFT_2130at 264.238 kb on + strand, within B158DRAFT_2130at 264.240 kb on - strand, within B158DRAFT_2130at 264.246 kb on - strand, within B158DRAFT_2130at 264.246 kb on - strand, within B158DRAFT_2130at 264.247 kb on - strand, within B158DRAFT_2130at 264.258 kb on + strand, within B158DRAFT_2130at 264.382 kb on + strand, within B158DRAFT_2130at 264.541 kb on - strand, within B158DRAFT_2130at 264.556 kb on - strand, within B158DRAFT_2130at 264.561 kb on + strand, within B158DRAFT_2130at 264.696 kb on + strand, within B158DRAFT_2130at 264.741 kb on + strand, within B158DRAFT_2130at 264.741 kb on + strand, within B158DRAFT_2130at 264.742 kb on - strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.931 kb on + strand, within B158DRAFT_2130at 264.936 kb on + strand, within B158DRAFT_2130at 264.939 kb on - strand, within B158DRAFT_2130at 264.949 kb on - strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 265.014 kb on + strandat 265.022 kb on - strandat 265.177 kb on + strandat 265.179 kb on + strandat 265.202 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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263,509 + +0.5
263,533 + +0.6
263,634 + +0.8
263,642 - +2.4
263,642 - +1.0
263,643 + +0.9
264,051 + -1.0
264,059 - +1.8
264,059 - +1.0
264,059 - +1.3
264,059 - +2.1
264,207 + +1.0
264,215 - +1.1
264,215 - +1.9
264,219 + B158DRAFT_2130 0.10 +1.0
264,227 - B158DRAFT_2130 0.11 +0.5
264,238 + B158DRAFT_2130 0.12 -0.6
264,238 + B158DRAFT_2130 0.12 +1.7
264,240 - B158DRAFT_2130 0.13 +1.5
264,246 - B158DRAFT_2130 0.13 +1.9
264,246 - B158DRAFT_2130 0.13 +1.4
264,247 - B158DRAFT_2130 0.13 +1.9
264,258 + B158DRAFT_2130 0.15 +2.0
264,382 + B158DRAFT_2130 0.28 +1.5
264,541 - B158DRAFT_2130 0.45 +2.3
264,556 - B158DRAFT_2130 0.47 +1.2
264,561 + B158DRAFT_2130 0.47 +1.9
264,696 + B158DRAFT_2130 0.62 +1.7
264,741 + B158DRAFT_2130 0.67 +1.9
264,741 + B158DRAFT_2130 0.67 +1.5
264,742 - B158DRAFT_2130 0.67 +1.8
264,773 + B158DRAFT_2130 0.70 +2.3
264,773 + B158DRAFT_2130 0.70 -0.2
264,773 + B158DRAFT_2130 0.70 +0.9
264,773 + B158DRAFT_2130 0.70 +1.0
264,781 - B158DRAFT_2130 0.71 +2.2
264,781 - B158DRAFT_2130 0.71 +1.7
264,781 - B158DRAFT_2130 0.71 +3.2
264,781 - B158DRAFT_2130 0.71 +1.8
264,781 - B158DRAFT_2130 0.71 +1.0
264,781 - B158DRAFT_2130 0.71 +2.6
264,781 - B158DRAFT_2130 0.71 +1.6
264,781 - B158DRAFT_2130 0.71 +1.9
264,931 + B158DRAFT_2130 0.88 +1.1
264,936 + B158DRAFT_2130 0.88 +2.0
264,939 - B158DRAFT_2130 0.88 +0.4
264,949 - B158DRAFT_2130 0.90 +2.5
264,951 + B158DRAFT_2130 0.90 +1.7
264,951 + B158DRAFT_2130 0.90 +0.1
264,951 + B158DRAFT_2130 0.90 +1.0
264,951 + B158DRAFT_2130 0.90 +0.3
264,951 + B158DRAFT_2130 0.90 +2.4
264,951 + B158DRAFT_2130 0.90 +0.9
264,951 + B158DRAFT_2130 0.90 +1.3
264,951 + B158DRAFT_2130 0.90 +1.7
264,959 - +1.7
264,959 - +1.2
264,959 - +0.9
264,959 - +1.0
264,959 - +0.8
264,959 - +1.5
264,959 - +1.6
264,959 - +1.1
264,959 - +1.7
264,959 - +1.5
264,959 - +2.0
264,959 - +1.9
265,014 + +0.5
265,022 - +0.7
265,177 + +1.5
265,179 + +1.1
265,202 + +0.3

Or see this region's nucleotide sequence