Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2052

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2050 and B158DRAFT_2051 are separated by 126 nucleotidesB158DRAFT_2051 and B158DRAFT_2052 are separated by 98 nucleotidesB158DRAFT_2052 and B158DRAFT_2053 are separated by 29 nucleotidesB158DRAFT_2053 and B158DRAFT_2054 are separated by 125 nucleotides B158DRAFT_2050: B158DRAFT_2050 - hypothetical protein, at 183,675 to 185,612 _2050 B158DRAFT_2051: B158DRAFT_2051 - tRNA_Met_CAT, at 185,739 to 185,815 _2051 B158DRAFT_2052: B158DRAFT_2052 - GTP-binding protein YchF, at 185,914 to 187,005 _2052 B158DRAFT_2053: B158DRAFT_2053 - peptidyl-tRNA hydrolase, at 187,035 to 187,628 _2053 B158DRAFT_2054: B158DRAFT_2054 - ribosomal protein L25, Ctc-form, at 187,754 to 188,431 _2054 Position (kb) 185 186 187 188Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 184.982 kb on + strand, within B158DRAFT_2050at 185.447 kb on - strandat 185.547 kb on - strandat 185.548 kb on + strandat 185.555 kb on + strandat 185.556 kb on - strandat 185.911 kb on + strandat 185.919 kb on - strandat 185.919 kb on - strandat 185.940 kb on - strandat 185.957 kb on + strandat 185.965 kb on - strandat 185.965 kb on - strandat 186.055 kb on + strand, within B158DRAFT_2052at 186.055 kb on + strand, within B158DRAFT_2052at 186.063 kb on - strand, within B158DRAFT_2052at 186.076 kb on + strand, within B158DRAFT_2052at 186.178 kb on - strand, within B158DRAFT_2052at 186.179 kb on - strand, within B158DRAFT_2052at 186.181 kb on + strand, within B158DRAFT_2052at 186.181 kb on + strand, within B158DRAFT_2052at 186.181 kb on + strand, within B158DRAFT_2052at 186.181 kb on + strand, within B158DRAFT_2052at 186.189 kb on - strand, within B158DRAFT_2052at 186.189 kb on - strand, within B158DRAFT_2052at 186.189 kb on - strand, within B158DRAFT_2052at 186.189 kb on - strand, within B158DRAFT_2052at 186.189 kb on - strand, within B158DRAFT_2052at 186.205 kb on + strand, within B158DRAFT_2052at 186.205 kb on + strand, within B158DRAFT_2052at 186.205 kb on + strand, within B158DRAFT_2052at 186.210 kb on + strand, within B158DRAFT_2052at 186.213 kb on - strand, within B158DRAFT_2052at 186.213 kb on - strand, within B158DRAFT_2052at 186.213 kb on - strand, within B158DRAFT_2052at 186.213 kb on - strand, within B158DRAFT_2052at 186.213 kb on - strand, within B158DRAFT_2052at 186.215 kb on + strand, within B158DRAFT_2052at 186.215 kb on + strand, within B158DRAFT_2052at 186.223 kb on - strand, within B158DRAFT_2052at 186.223 kb on - strand, within B158DRAFT_2052at 186.223 kb on - strand, within B158DRAFT_2052at 186.225 kb on + strand, within B158DRAFT_2052at 186.233 kb on - strand, within B158DRAFT_2052at 186.236 kb on + strand, within B158DRAFT_2052at 186.244 kb on - strand, within B158DRAFT_2052at 186.298 kb on + strand, within B158DRAFT_2052at 186.306 kb on - strand, within B158DRAFT_2052at 186.377 kb on + strand, within B158DRAFT_2052at 186.377 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.459 kb on + strand, within B158DRAFT_2052at 186.467 kb on - strand, within B158DRAFT_2052at 186.469 kb on + strand, within B158DRAFT_2052at 186.477 kb on - strand, within B158DRAFT_2052at 186.477 kb on - strand, within B158DRAFT_2052at 186.477 kb on - strand, within B158DRAFT_2052at 186.477 kb on - strand, within B158DRAFT_2052at 186.477 kb on - strand, within B158DRAFT_2052at 186.590 kb on + strand, within B158DRAFT_2052at 186.688 kb on + strand, within B158DRAFT_2052at 186.688 kb on + strand, within B158DRAFT_2052at 186.745 kb on + strand, within B158DRAFT_2052at 186.750 kb on + strand, within B158DRAFT_2052at 186.751 kb on + strand, within B158DRAFT_2052at 186.753 kb on - strand, within B158DRAFT_2052at 186.766 kb on - strand, within B158DRAFT_2052at 186.869 kb on - strand, within B158DRAFT_2052at 186.891 kb on + strand, within B158DRAFT_2052at 186.899 kb on - strandat 186.910 kb on + strandat 186.944 kb on + strandat 186.944 kb on + strandat 186.945 kb on - strandat 186.949 kb on + strandat 186.952 kb on - strandat 186.962 kb on - strandat 187.014 kb on - strandat 187.049 kb on + strandat 187.049 kb on + strandat 187.057 kb on - strandat 187.057 kb on - strandat 187.075 kb on + strandat 187.075 kb on + strandat 187.075 kb on + strandat 187.075 kb on + strandat 187.075 kb on + strandat 187.075 kb on + strandat 187.083 kb on - strandat 187.083 kb on - strandat 187.101 kb on + strand, within B158DRAFT_2053at 187.628 kb on - strandat 187.651 kb on - strandat 187.760 kb on - strandat 187.865 kb on - strand, within B158DRAFT_2054at 187.889 kb on + strand, within B158DRAFT_2054at 187.897 kb on - strand, within B158DRAFT_2054at 187.957 kb on - strand, within B158DRAFT_2054at 187.969 kb on + strand, within B158DRAFT_2054at 187.969 kb on + strand, within B158DRAFT_2054

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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184,982 + B158DRAFT_2050 0.67 +0.3
185,447 - +0.4
185,547 - +2.4
185,548 + -0.3
185,555 + +3.2
185,556 - +0.5
185,911 + -0.2
185,919 - -0.7
185,919 - +0.1
185,940 - +1.2
185,957 + -2.9
185,965 - +0.2
185,965 - +0.3
186,055 + B158DRAFT_2052 0.13 -0.1
186,055 + B158DRAFT_2052 0.13 -0.2
186,063 - B158DRAFT_2052 0.14 +1.5
186,076 + B158DRAFT_2052 0.15 -1.4
186,178 - B158DRAFT_2052 0.24 +0.9
186,179 - B158DRAFT_2052 0.24 +0.2
186,181 + B158DRAFT_2052 0.24 -0.1
186,181 + B158DRAFT_2052 0.24 +0.5
186,181 + B158DRAFT_2052 0.24 +0.2
186,181 + B158DRAFT_2052 0.24 +0.0
186,189 - B158DRAFT_2052 0.25 +0.6
186,189 - B158DRAFT_2052 0.25 +1.2
186,189 - B158DRAFT_2052 0.25 -0.9
186,189 - B158DRAFT_2052 0.25 -0.7
186,189 - B158DRAFT_2052 0.25 -0.3
186,205 + B158DRAFT_2052 0.27 -0.2
186,205 + B158DRAFT_2052 0.27 +0.1
186,205 + B158DRAFT_2052 0.27 +0.3
186,210 + B158DRAFT_2052 0.27 +0.3
186,213 - B158DRAFT_2052 0.27 +0.1
186,213 - B158DRAFT_2052 0.27 +0.4
186,213 - B158DRAFT_2052 0.27 -3.2
186,213 - B158DRAFT_2052 0.27 +0.8
186,213 - B158DRAFT_2052 0.27 +0.2
186,215 + B158DRAFT_2052 0.28 -0.6
186,215 + B158DRAFT_2052 0.28 -0.3
186,223 - B158DRAFT_2052 0.28 -0.2
186,223 - B158DRAFT_2052 0.28 -3.6
186,223 - B158DRAFT_2052 0.28 +1.6
186,225 + B158DRAFT_2052 0.28 +0.2
186,233 - B158DRAFT_2052 0.29 -0.3
186,236 + B158DRAFT_2052 0.29 -0.7
186,244 - B158DRAFT_2052 0.30 -0.3
186,298 + B158DRAFT_2052 0.35 -0.3
186,306 - B158DRAFT_2052 0.36 -0.2
186,377 + B158DRAFT_2052 0.42 -0.8
186,377 + B158DRAFT_2052 0.42 -0.2
186,459 + B158DRAFT_2052 0.50 -0.0
186,459 + B158DRAFT_2052 0.50 -1.3
186,459 + B158DRAFT_2052 0.50 +0.2
186,459 + B158DRAFT_2052 0.50 +0.3
186,459 + B158DRAFT_2052 0.50 -1.4
186,459 + B158DRAFT_2052 0.50 -0.0
186,459 + B158DRAFT_2052 0.50 -1.1
186,459 + B158DRAFT_2052 0.50 +0.9
186,467 - B158DRAFT_2052 0.51 +1.7
186,469 + B158DRAFT_2052 0.51 -0.7
186,477 - B158DRAFT_2052 0.52 -0.2
186,477 - B158DRAFT_2052 0.52 +0.2
186,477 - B158DRAFT_2052 0.52 -0.2
186,477 - B158DRAFT_2052 0.52 +0.7
186,477 - B158DRAFT_2052 0.52 +0.9
186,590 + B158DRAFT_2052 0.62 +0.3
186,688 + B158DRAFT_2052 0.71 +0.0
186,688 + B158DRAFT_2052 0.71 +0.0
186,745 + B158DRAFT_2052 0.76 -0.1
186,750 + B158DRAFT_2052 0.77 +2.7
186,751 + B158DRAFT_2052 0.77 -0.2
186,753 - B158DRAFT_2052 0.77 +0.1
186,766 - B158DRAFT_2052 0.78 +0.6
186,869 - B158DRAFT_2052 0.87 +0.7
186,891 + B158DRAFT_2052 0.89 +0.2
186,899 - +0.7
186,910 + +0.5
186,944 + -0.9
186,944 + +0.3
186,945 - +0.9
186,949 + +2.4
186,952 - -0.7
186,962 - -0.8
187,014 - +0.4
187,049 + -0.8
187,049 + +1.2
187,057 - -0.2
187,057 - +0.1
187,075 + -0.7
187,075 + +0.8
187,075 + -0.2
187,075 + -1.0
187,075 + +0.8
187,075 + -1.4
187,083 - -0.1
187,083 - +0.7
187,101 + B158DRAFT_2053 0.11 -1.9
187,628 - -0.6
187,651 - -1.9
187,760 - +1.2
187,865 - B158DRAFT_2054 0.16 -0.1
187,889 + B158DRAFT_2054 0.20 +1.4
187,897 - B158DRAFT_2054 0.21 +1.0
187,957 - B158DRAFT_2054 0.30 +0.8
187,969 + B158DRAFT_2054 0.32 +0.8
187,969 + B158DRAFT_2054 0.32 -0.1

Or see this region's nucleotide sequence