Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1748

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1747 and B158DRAFT_1748 overlap by 4 nucleotidesB158DRAFT_1748 and B158DRAFT_1749 are separated by 6 nucleotides B158DRAFT_1747: B158DRAFT_1747 - DNA polymerase III, delta' subunit, at 1,830,491 to 1,831,489 _1747 B158DRAFT_1748: B158DRAFT_1748 - thymidylate kinase, at 1,831,486 to 1,832,145 _1748 B158DRAFT_1749: B158DRAFT_1749 - conserved hypothetical protein, YceG family, at 1,832,152 to 1,833,156 _1749 Position (kb) 1831 1832 1833Strain fitness (log2 ratio) -2 -1 0 1at 1831.504 kb on - strandat 1832.178 kb on - strandat 1832.178 kb on - strandat 1832.178 kb on - strandat 1832.283 kb on - strand, within B158DRAFT_1749at 1832.337 kb on - strand, within B158DRAFT_1749at 1832.339 kb on - strand, within B158DRAFT_1749at 1832.350 kb on - strand, within B158DRAFT_1749at 1832.443 kb on - strand, within B158DRAFT_1749at 1832.455 kb on - strand, within B158DRAFT_1749at 1832.501 kb on - strand, within B158DRAFT_1749

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,831,504 - -1.0
1,832,178 - -0.8
1,832,178 - -2.6
1,832,178 - -2.3
1,832,283 - B158DRAFT_1749 0.13 +1.7
1,832,337 - B158DRAFT_1749 0.18 -0.0
1,832,339 - B158DRAFT_1749 0.19 +0.3
1,832,350 - B158DRAFT_1749 0.20 -2.5
1,832,443 - B158DRAFT_1749 0.29 -1.8
1,832,455 - B158DRAFT_1749 0.30 -1.6
1,832,501 - B158DRAFT_1749 0.35 -1.6

Or see this region's nucleotide sequence