Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1729

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1727 and B158DRAFT_1728 are separated by 221 nucleotidesB158DRAFT_1728 and B158DRAFT_1729 are separated by 102 nucleotidesB158DRAFT_1729 and B158DRAFT_1730 are separated by 59 nucleotides B158DRAFT_1727: B158DRAFT_1727 - ribonucleoside-triphosphate reductase class III catalytic subunit (EC 1.17.4.2), at 1,800,769 to 1,802,808 _1727 B158DRAFT_1728: B158DRAFT_1728 - Uncharacterized conserved protein, at 1,803,030 to 1,803,401 _1728 B158DRAFT_1729: B158DRAFT_1729 - Glutamate decarboxylase and related PLP-dependent proteins, at 1,803,504 to 1,805,483 _1729 B158DRAFT_1730: B158DRAFT_1730 - Mg2+ and Co2+ transporters, at 1,805,543 to 1,806,514 _1730 Position (kb) 1803 1804 1805 1806Strain fitness (log2 ratio) -2 -1 0 1 2at 1802.564 kb on + strand, within B158DRAFT_1727at 1802.589 kb on - strand, within B158DRAFT_1727at 1802.710 kb on - strandat 1802.710 kb on - strandat 1802.780 kb on + strandat 1802.948 kb on + strandat 1802.975 kb on + strandat 1802.990 kb on - strandat 1802.990 kb on - strandat 1803.073 kb on + strand, within B158DRAFT_1728at 1803.081 kb on - strand, within B158DRAFT_1728at 1803.081 kb on - strand, within B158DRAFT_1728at 1803.106 kb on - strand, within B158DRAFT_1728at 1803.226 kb on + strand, within B158DRAFT_1728at 1803.228 kb on + strand, within B158DRAFT_1728at 1803.228 kb on + strand, within B158DRAFT_1728at 1803.228 kb on + strand, within B158DRAFT_1728at 1803.228 kb on + strand, within B158DRAFT_1728at 1803.228 kb on + strand, within B158DRAFT_1728at 1803.236 kb on - strand, within B158DRAFT_1728at 1803.236 kb on - strand, within B158DRAFT_1728at 1803.236 kb on - strand, within B158DRAFT_1728at 1803.236 kb on - strand, within B158DRAFT_1728at 1803.236 kb on - strand, within B158DRAFT_1728at 1803.236 kb on - strand, within B158DRAFT_1728at 1803.236 kb on - strand, within B158DRAFT_1728at 1803.240 kb on + strand, within B158DRAFT_1728at 1803.271 kb on + strand, within B158DRAFT_1728at 1803.273 kb on - strand, within B158DRAFT_1728at 1803.279 kb on - strand, within B158DRAFT_1728at 1803.279 kb on - strand, within B158DRAFT_1728at 1803.279 kb on - strand, within B158DRAFT_1728at 1803.279 kb on - strand, within B158DRAFT_1728at 1803.279 kb on - strand, within B158DRAFT_1728at 1803.279 kb on - strand, within B158DRAFT_1728at 1803.304 kb on + strand, within B158DRAFT_1728at 1803.320 kb on + strand, within B158DRAFT_1728at 1803.467 kb on + strandat 1803.538 kb on - strandat 1803.572 kb on + strandat 1803.572 kb on + strandat 1803.572 kb on + strandat 1803.572 kb on + strandat 1803.580 kb on - strandat 1803.580 kb on - strandat 1803.664 kb on + strandat 1803.672 kb on - strandat 1803.715 kb on - strand, within B158DRAFT_1729at 1803.778 kb on - strand, within B158DRAFT_1729at 1803.820 kb on - strand, within B158DRAFT_1729at 1803.820 kb on - strand, within B158DRAFT_1729at 1803.896 kb on - strand, within B158DRAFT_1729at 1803.973 kb on - strand, within B158DRAFT_1729at 1803.973 kb on - strand, within B158DRAFT_1729at 1804.075 kb on + strand, within B158DRAFT_1729at 1804.075 kb on + strand, within B158DRAFT_1729at 1804.083 kb on - strand, within B158DRAFT_1729at 1804.142 kb on + strand, within B158DRAFT_1729at 1804.207 kb on + strand, within B158DRAFT_1729at 1804.215 kb on - strand, within B158DRAFT_1729at 1804.215 kb on - strand, within B158DRAFT_1729at 1804.243 kb on + strand, within B158DRAFT_1729at 1804.282 kb on - strand, within B158DRAFT_1729at 1804.291 kb on + strand, within B158DRAFT_1729at 1804.317 kb on - strand, within B158DRAFT_1729at 1804.317 kb on - strand, within B158DRAFT_1729at 1804.357 kb on + strand, within B158DRAFT_1729at 1804.478 kb on + strand, within B158DRAFT_1729at 1804.493 kb on + strand, within B158DRAFT_1729at 1804.501 kb on + strand, within B158DRAFT_1729at 1804.562 kb on - strand, within B158DRAFT_1729at 1804.830 kb on - strand, within B158DRAFT_1729at 1804.867 kb on + strand, within B158DRAFT_1729at 1804.909 kb on + strand, within B158DRAFT_1729at 1804.909 kb on + strand, within B158DRAFT_1729at 1804.910 kb on + strand, within B158DRAFT_1729at 1804.917 kb on - strand, within B158DRAFT_1729at 1805.011 kb on - strand, within B158DRAFT_1729at 1805.073 kb on - strand, within B158DRAFT_1729at 1805.206 kb on + strand, within B158DRAFT_1729at 1805.233 kb on + strand, within B158DRAFT_1729at 1805.251 kb on - strand, within B158DRAFT_1729at 1805.263 kb on - strand, within B158DRAFT_1729at 1805.642 kb on + strand, within B158DRAFT_1730at 1805.642 kb on + strand, within B158DRAFT_1730at 1805.642 kb on + strand, within B158DRAFT_1730at 1805.860 kb on - strand, within B158DRAFT_1730at 1805.905 kb on + strand, within B158DRAFT_1730at 1805.920 kb on + strand, within B158DRAFT_1730at 1805.928 kb on - strand, within B158DRAFT_1730at 1806.095 kb on - strand, within B158DRAFT_1730at 1806.132 kb on - strand, within B158DRAFT_1730at 1806.158 kb on + strand, within B158DRAFT_1730at 1806.240 kb on + strand, within B158DRAFT_1730at 1806.240 kb on + strand, within B158DRAFT_1730at 1806.247 kb on + strand, within B158DRAFT_1730at 1806.247 kb on + strand, within B158DRAFT_1730at 1806.247 kb on + strand, within B158DRAFT_1730at 1806.247 kb on + strand, within B158DRAFT_1730at 1806.247 kb on + strand, within B158DRAFT_1730at 1806.247 kb on + strand, within B158DRAFT_1730at 1806.248 kb on - strand, within B158DRAFT_1730at 1806.255 kb on - strand, within B158DRAFT_1730at 1806.255 kb on - strand, within B158DRAFT_1730at 1806.255 kb on - strand, within B158DRAFT_1730at 1806.325 kb on - strand, within B158DRAFT_1730at 1806.452 kb on + strandat 1806.452 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,802,564 + B158DRAFT_1727 0.88 -0.3
1,802,589 - B158DRAFT_1727 0.89 +0.8
1,802,710 - -1.4
1,802,710 - +0.4
1,802,780 + -2.6
1,802,948 + -0.9
1,802,975 + +1.8
1,802,990 - -0.5
1,802,990 - -0.5
1,803,073 + B158DRAFT_1728 0.12 -0.6
1,803,081 - B158DRAFT_1728 0.14 -1.6
1,803,081 - B158DRAFT_1728 0.14 +0.4
1,803,106 - B158DRAFT_1728 0.20 +0.3
1,803,226 + B158DRAFT_1728 0.53 -0.5
1,803,228 + B158DRAFT_1728 0.53 -0.1
1,803,228 + B158DRAFT_1728 0.53 +0.4
1,803,228 + B158DRAFT_1728 0.53 +0.3
1,803,228 + B158DRAFT_1728 0.53 +1.2
1,803,228 + B158DRAFT_1728 0.53 -0.1
1,803,236 - B158DRAFT_1728 0.55 +0.0
1,803,236 - B158DRAFT_1728 0.55 -2.5
1,803,236 - B158DRAFT_1728 0.55 -0.7
1,803,236 - B158DRAFT_1728 0.55 +1.0
1,803,236 - B158DRAFT_1728 0.55 +0.3
1,803,236 - B158DRAFT_1728 0.55 -0.3
1,803,236 - B158DRAFT_1728 0.55 -0.8
1,803,240 + B158DRAFT_1728 0.56 +1.0
1,803,271 + B158DRAFT_1728 0.65 -1.6
1,803,273 - B158DRAFT_1728 0.65 +1.2
1,803,279 - B158DRAFT_1728 0.67 -2.0
1,803,279 - B158DRAFT_1728 0.67 +0.4
1,803,279 - B158DRAFT_1728 0.67 -0.2
1,803,279 - B158DRAFT_1728 0.67 -0.5
1,803,279 - B158DRAFT_1728 0.67 -1.5
1,803,279 - B158DRAFT_1728 0.67 -0.0
1,803,304 + B158DRAFT_1728 0.74 +1.1
1,803,320 + B158DRAFT_1728 0.78 -1.3
1,803,467 + -0.2
1,803,538 - +0.2
1,803,572 + +0.0
1,803,572 + +0.3
1,803,572 + -2.1
1,803,572 + +1.6
1,803,580 - -0.5
1,803,580 - -0.3
1,803,664 + -0.8
1,803,672 - -0.7
1,803,715 - B158DRAFT_1729 0.11 +0.5
1,803,778 - B158DRAFT_1729 0.14 -1.3
1,803,820 - B158DRAFT_1729 0.16 +0.2
1,803,820 - B158DRAFT_1729 0.16 +0.9
1,803,896 - B158DRAFT_1729 0.20 -0.2
1,803,973 - B158DRAFT_1729 0.24 -0.0
1,803,973 - B158DRAFT_1729 0.24 +0.0
1,804,075 + B158DRAFT_1729 0.29 +0.5
1,804,075 + B158DRAFT_1729 0.29 +0.0
1,804,083 - B158DRAFT_1729 0.29 +0.1
1,804,142 + B158DRAFT_1729 0.32 +0.5
1,804,207 + B158DRAFT_1729 0.36 -0.0
1,804,215 - B158DRAFT_1729 0.36 -0.0
1,804,215 - B158DRAFT_1729 0.36 -0.3
1,804,243 + B158DRAFT_1729 0.37 -0.0
1,804,282 - B158DRAFT_1729 0.39 -0.1
1,804,291 + B158DRAFT_1729 0.40 -0.4
1,804,317 - B158DRAFT_1729 0.41 +0.8
1,804,317 - B158DRAFT_1729 0.41 +0.1
1,804,357 + B158DRAFT_1729 0.43 +0.1
1,804,478 + B158DRAFT_1729 0.49 -0.6
1,804,493 + B158DRAFT_1729 0.50 +1.0
1,804,501 + B158DRAFT_1729 0.50 -0.7
1,804,562 - B158DRAFT_1729 0.53 -1.1
1,804,830 - B158DRAFT_1729 0.67 +0.4
1,804,867 + B158DRAFT_1729 0.69 -0.6
1,804,909 + B158DRAFT_1729 0.71 +0.2
1,804,909 + B158DRAFT_1729 0.71 -0.2
1,804,910 + B158DRAFT_1729 0.71 -0.2
1,804,917 - B158DRAFT_1729 0.71 -0.5
1,805,011 - B158DRAFT_1729 0.76 -0.1
1,805,073 - B158DRAFT_1729 0.79 -0.1
1,805,206 + B158DRAFT_1729 0.86 -0.9
1,805,233 + B158DRAFT_1729 0.87 -0.1
1,805,251 - B158DRAFT_1729 0.88 -1.0
1,805,263 - B158DRAFT_1729 0.89 +0.9
1,805,642 + B158DRAFT_1730 0.10 -0.4
1,805,642 + B158DRAFT_1730 0.10 -0.7
1,805,642 + B158DRAFT_1730 0.10 -1.0
1,805,860 - B158DRAFT_1730 0.33 +0.3
1,805,905 + B158DRAFT_1730 0.37 -0.5
1,805,920 + B158DRAFT_1730 0.39 +0.4
1,805,928 - B158DRAFT_1730 0.40 -0.9
1,806,095 - B158DRAFT_1730 0.57 -1.2
1,806,132 - B158DRAFT_1730 0.61 -0.3
1,806,158 + B158DRAFT_1730 0.63 +0.5
1,806,240 + B158DRAFT_1730 0.72 -1.1
1,806,240 + B158DRAFT_1730 0.72 -0.2
1,806,247 + B158DRAFT_1730 0.72 -0.5
1,806,247 + B158DRAFT_1730 0.72 -0.2
1,806,247 + B158DRAFT_1730 0.72 -0.8
1,806,247 + B158DRAFT_1730 0.72 +0.2
1,806,247 + B158DRAFT_1730 0.72 +0.2
1,806,247 + B158DRAFT_1730 0.72 -0.5
1,806,248 - B158DRAFT_1730 0.73 -1.0
1,806,255 - B158DRAFT_1730 0.73 -0.6
1,806,255 - B158DRAFT_1730 0.73 -0.4
1,806,255 - B158DRAFT_1730 0.73 -0.7
1,806,325 - B158DRAFT_1730 0.80 -0.3
1,806,452 + +0.4
1,806,452 + -0.9

Or see this region's nucleotide sequence