Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1580

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1579 and B158DRAFT_1580 are separated by 129 nucleotidesB158DRAFT_1580 and B158DRAFT_1581 are separated by 2 nucleotides B158DRAFT_1579: B158DRAFT_1579 - 2,4-dienoyl-CoA reductase (EC 1.3.1.34), at 1,638,404 to 1,640,425 _1579 B158DRAFT_1580: B158DRAFT_1580 - hypothetical protein, at 1,640,555 to 1,640,707 _1580 B158DRAFT_1581: B158DRAFT_1581 - diguanylate cyclase (GGDEF) domain, at 1,640,710 to 1,642,599 _1581 Position (kb) 1640 1641Strain fitness (log2 ratio) -3 -2 -1 0 1at 1639.639 kb on + strand, within B158DRAFT_1579at 1639.642 kb on + strand, within B158DRAFT_1579at 1639.647 kb on - strand, within B158DRAFT_1579at 1639.665 kb on - strand, within B158DRAFT_1579at 1639.665 kb on - strand, within B158DRAFT_1579at 1639.667 kb on + strand, within B158DRAFT_1579at 1639.685 kb on + strand, within B158DRAFT_1579at 1639.693 kb on - strand, within B158DRAFT_1579at 1639.695 kb on + strand, within B158DRAFT_1579at 1639.695 kb on + strand, within B158DRAFT_1579at 1639.703 kb on - strand, within B158DRAFT_1579at 1639.727 kb on + strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.787 kb on + strand, within B158DRAFT_1579at 1639.901 kb on + strand, within B158DRAFT_1579at 1639.926 kb on + strand, within B158DRAFT_1579at 1639.926 kb on + strand, within B158DRAFT_1579at 1639.926 kb on + strand, within B158DRAFT_1579at 1639.934 kb on + strand, within B158DRAFT_1579at 1639.942 kb on - strand, within B158DRAFT_1579at 1639.970 kb on + strand, within B158DRAFT_1579at 1640.083 kb on - strand, within B158DRAFT_1579at 1640.168 kb on - strand, within B158DRAFT_1579at 1640.225 kb on + strandat 1640.291 kb on + strandat 1640.301 kb on - strandat 1640.360 kb on - strandat 1640.377 kb on - strandat 1640.379 kb on - strandat 1640.396 kb on - strandat 1640.526 kb on - strandat 1640.539 kb on + strandat 1640.551 kb on + strandat 1640.551 kb on + strandat 1640.598 kb on + strand, within B158DRAFT_1580at 1640.606 kb on - strand, within B158DRAFT_1580at 1640.606 kb on - strand, within B158DRAFT_1580at 1640.620 kb on - strand, within B158DRAFT_1580at 1640.620 kb on - strand, within B158DRAFT_1580at 1640.844 kb on - strandat 1640.924 kb on - strand, within B158DRAFT_1581at 1640.964 kb on - strand, within B158DRAFT_1581at 1640.989 kb on - strand, within B158DRAFT_1581at 1640.989 kb on - strand, within B158DRAFT_1581at 1641.238 kb on - strand, within B158DRAFT_1581at 1641.250 kb on + strand, within B158DRAFT_1581at 1641.250 kb on + strand, within B158DRAFT_1581at 1641.250 kb on + strand, within B158DRAFT_1581at 1641.258 kb on - strand, within B158DRAFT_1581at 1641.258 kb on - strand, within B158DRAFT_1581at 1641.261 kb on + strand, within B158DRAFT_1581at 1641.295 kb on - strand, within B158DRAFT_1581at 1641.385 kb on + strand, within B158DRAFT_1581at 1641.393 kb on - strand, within B158DRAFT_1581at 1641.447 kb on + strand, within B158DRAFT_1581at 1641.447 kb on + strand, within B158DRAFT_1581at 1641.447 kb on + strand, within B158DRAFT_1581at 1641.447 kb on + strand, within B158DRAFT_1581at 1641.455 kb on - strand, within B158DRAFT_1581at 1641.455 kb on - strand, within B158DRAFT_1581at 1641.455 kb on - strand, within B158DRAFT_1581at 1641.475 kb on - strand, within B158DRAFT_1581at 1641.485 kb on - strand, within B158DRAFT_1581at 1641.491 kb on - strand, within B158DRAFT_1581at 1641.555 kb on + strand, within B158DRAFT_1581at 1641.590 kb on - strand, within B158DRAFT_1581at 1641.598 kb on - strand, within B158DRAFT_1581at 1641.600 kb on - strand, within B158DRAFT_1581at 1641.629 kb on + strand, within B158DRAFT_1581at 1641.652 kb on + strand, within B158DRAFT_1581at 1641.698 kb on + strand, within B158DRAFT_1581at 1641.698 kb on + strand, within B158DRAFT_1581at 1641.706 kb on - strand, within B158DRAFT_1581

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,639,639 + B158DRAFT_1579 0.61 -1.6
1,639,642 + B158DRAFT_1579 0.61 -0.1
1,639,647 - B158DRAFT_1579 0.61 -0.0
1,639,665 - B158DRAFT_1579 0.62 -0.5
1,639,665 - B158DRAFT_1579 0.62 +0.4
1,639,667 + B158DRAFT_1579 0.62 +0.4
1,639,685 + B158DRAFT_1579 0.63 -0.5
1,639,693 - B158DRAFT_1579 0.64 +0.5
1,639,695 + B158DRAFT_1579 0.64 -0.3
1,639,695 + B158DRAFT_1579 0.64 -0.4
1,639,703 - B158DRAFT_1579 0.64 +0.2
1,639,727 + B158DRAFT_1579 0.65 +0.6
1,639,735 - B158DRAFT_1579 0.66 -0.1
1,639,735 - B158DRAFT_1579 0.66 -1.0
1,639,735 - B158DRAFT_1579 0.66 -1.2
1,639,735 - B158DRAFT_1579 0.66 -0.4
1,639,787 + B158DRAFT_1579 0.68 -0.5
1,639,901 + B158DRAFT_1579 0.74 +0.5
1,639,926 + B158DRAFT_1579 0.75 -0.5
1,639,926 + B158DRAFT_1579 0.75 -1.8
1,639,926 + B158DRAFT_1579 0.75 -0.8
1,639,934 + B158DRAFT_1579 0.76 -0.6
1,639,942 - B158DRAFT_1579 0.76 +0.5
1,639,970 + B158DRAFT_1579 0.77 +0.5
1,640,083 - B158DRAFT_1579 0.83 +0.3
1,640,168 - B158DRAFT_1579 0.87 +0.0
1,640,225 + -0.4
1,640,291 + -0.6
1,640,301 - +0.4
1,640,360 - -0.6
1,640,377 - -0.2
1,640,379 - -0.3
1,640,396 - +0.3
1,640,526 - -0.9
1,640,539 + -0.4
1,640,551 + -0.0
1,640,551 + -0.3
1,640,598 + B158DRAFT_1580 0.28 +1.2
1,640,606 - B158DRAFT_1580 0.33 +0.4
1,640,606 - B158DRAFT_1580 0.33 -0.3
1,640,620 - B158DRAFT_1580 0.42 +0.3
1,640,620 - B158DRAFT_1580 0.42 +0.1
1,640,844 - -0.2
1,640,924 - B158DRAFT_1581 0.11 +0.6
1,640,964 - B158DRAFT_1581 0.13 -0.7
1,640,989 - B158DRAFT_1581 0.15 -0.0
1,640,989 - B158DRAFT_1581 0.15 -0.4
1,641,238 - B158DRAFT_1581 0.28 -0.3
1,641,250 + B158DRAFT_1581 0.29 -0.2
1,641,250 + B158DRAFT_1581 0.29 -0.2
1,641,250 + B158DRAFT_1581 0.29 -2.8
1,641,258 - B158DRAFT_1581 0.29 -1.2
1,641,258 - B158DRAFT_1581 0.29 -0.3
1,641,261 + B158DRAFT_1581 0.29 +1.2
1,641,295 - B158DRAFT_1581 0.31 -0.8
1,641,385 + B158DRAFT_1581 0.36 -0.5
1,641,393 - B158DRAFT_1581 0.36 -0.8
1,641,447 + B158DRAFT_1581 0.39 -0.6
1,641,447 + B158DRAFT_1581 0.39 -0.4
1,641,447 + B158DRAFT_1581 0.39 -0.0
1,641,447 + B158DRAFT_1581 0.39 +1.4
1,641,455 - B158DRAFT_1581 0.39 -1.0
1,641,455 - B158DRAFT_1581 0.39 -2.0
1,641,455 - B158DRAFT_1581 0.39 +0.2
1,641,475 - B158DRAFT_1581 0.40 -0.6
1,641,485 - B158DRAFT_1581 0.41 +0.3
1,641,491 - B158DRAFT_1581 0.41 +0.9
1,641,555 + B158DRAFT_1581 0.45 +0.1
1,641,590 - B158DRAFT_1581 0.47 -0.3
1,641,598 - B158DRAFT_1581 0.47 +1.0
1,641,600 - B158DRAFT_1581 0.47 -0.2
1,641,629 + B158DRAFT_1581 0.49 -0.0
1,641,652 + B158DRAFT_1581 0.50 +1.7
1,641,698 + B158DRAFT_1581 0.52 -1.0
1,641,698 + B158DRAFT_1581 0.52 -1.6
1,641,706 - B158DRAFT_1581 0.53 +1.4

Or see this region's nucleotide sequence