Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1579

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1578 and B158DRAFT_1579 are separated by 237 nucleotidesB158DRAFT_1579 and B158DRAFT_1580 are separated by 129 nucleotidesB158DRAFT_1580 and B158DRAFT_1581 are separated by 2 nucleotides B158DRAFT_1578: B158DRAFT_1578 - signal peptide peptidase SppA, 67K type, at 1,636,289 to 1,638,166 _1578 B158DRAFT_1579: B158DRAFT_1579 - 2,4-dienoyl-CoA reductase (EC 1.3.1.34), at 1,638,404 to 1,640,425 _1579 B158DRAFT_1580: B158DRAFT_1580 - hypothetical protein, at 1,640,555 to 1,640,707 _1580 B158DRAFT_1581: B158DRAFT_1581 - diguanylate cyclase (GGDEF) domain, at 1,640,710 to 1,642,599 _1581 Position (kb) 1638 1639 1640 1641Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1637.419 kb on + strand, within B158DRAFT_1578at 1637.474 kb on - strand, within B158DRAFT_1578at 1637.498 kb on - strand, within B158DRAFT_1578at 1637.508 kb on + strand, within B158DRAFT_1578at 1637.528 kb on + strand, within B158DRAFT_1578at 1637.528 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.555 kb on - strand, within B158DRAFT_1578at 1637.555 kb on - strand, within B158DRAFT_1578at 1637.578 kb on + strand, within B158DRAFT_1578at 1637.586 kb on - strand, within B158DRAFT_1578at 1637.586 kb on - strand, within B158DRAFT_1578at 1637.594 kb on + strand, within B158DRAFT_1578at 1637.594 kb on + strand, within B158DRAFT_1578at 1637.602 kb on - strand, within B158DRAFT_1578at 1637.602 kb on - strand, within B158DRAFT_1578at 1637.627 kb on + strand, within B158DRAFT_1578at 1637.627 kb on + strand, within B158DRAFT_1578at 1637.635 kb on - strand, within B158DRAFT_1578at 1637.635 kb on - strand, within B158DRAFT_1578at 1637.658 kb on - strand, within B158DRAFT_1578at 1637.671 kb on - strand, within B158DRAFT_1578at 1637.691 kb on + strand, within B158DRAFT_1578at 1637.691 kb on + strand, within B158DRAFT_1578at 1637.696 kb on + strand, within B158DRAFT_1578at 1637.699 kb on - strand, within B158DRAFT_1578at 1637.833 kb on + strand, within B158DRAFT_1578at 1637.833 kb on + strand, within B158DRAFT_1578at 1637.833 kb on + strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.874 kb on + strand, within B158DRAFT_1578at 1637.908 kb on + strand, within B158DRAFT_1578at 1637.915 kb on + strand, within B158DRAFT_1578at 1637.916 kb on - strand, within B158DRAFT_1578at 1637.923 kb on - strand, within B158DRAFT_1578at 1637.947 kb on + strand, within B158DRAFT_1578at 1638.001 kb on - strandat 1638.006 kb on - strandat 1638.010 kb on + strandat 1638.018 kb on - strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.087 kb on + strandat 1638.235 kb on - strandat 1638.235 kb on - strandat 1638.337 kb on + strandat 1638.360 kb on - strandat 1638.360 kb on - strandat 1638.401 kb on + strandat 1638.419 kb on - strandat 1638.460 kb on - strandat 1638.474 kb on + strandat 1638.474 kb on - strandat 1638.489 kb on + strandat 1638.549 kb on + strandat 1638.559 kb on + strandat 1638.623 kb on - strand, within B158DRAFT_1579at 1638.625 kb on + strand, within B158DRAFT_1579at 1638.625 kb on + strand, within B158DRAFT_1579at 1638.633 kb on - strand, within B158DRAFT_1579at 1638.643 kb on + strand, within B158DRAFT_1579at 1638.651 kb on - strand, within B158DRAFT_1579at 1638.671 kb on + strand, within B158DRAFT_1579at 1638.796 kb on - strand, within B158DRAFT_1579at 1638.866 kb on + strand, within B158DRAFT_1579at 1638.886 kb on - strand, within B158DRAFT_1579at 1638.937 kb on + strand, within B158DRAFT_1579at 1638.942 kb on + strand, within B158DRAFT_1579at 1638.945 kb on - strand, within B158DRAFT_1579at 1638.955 kb on - strand, within B158DRAFT_1579at 1638.963 kb on - strand, within B158DRAFT_1579at 1639.095 kb on - strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.205 kb on + strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.213 kb on - strand, within B158DRAFT_1579at 1639.289 kb on + strand, within B158DRAFT_1579at 1639.295 kb on - strand, within B158DRAFT_1579at 1639.297 kb on + strand, within B158DRAFT_1579at 1639.366 kb on + strand, within B158DRAFT_1579at 1639.376 kb on + strand, within B158DRAFT_1579at 1639.376 kb on + strand, within B158DRAFT_1579at 1639.384 kb on - strand, within B158DRAFT_1579at 1639.389 kb on - strand, within B158DRAFT_1579at 1639.389 kb on - strand, within B158DRAFT_1579at 1639.389 kb on - strand, within B158DRAFT_1579at 1639.389 kb on - strand, within B158DRAFT_1579at 1639.431 kb on - strand, within B158DRAFT_1579at 1639.431 kb on - strand, within B158DRAFT_1579at 1639.431 kb on - strand, within B158DRAFT_1579at 1639.491 kb on + strand, within B158DRAFT_1579at 1639.491 kb on + strand, within B158DRAFT_1579at 1639.535 kb on + strand, within B158DRAFT_1579at 1639.540 kb on + strand, within B158DRAFT_1579at 1639.639 kb on + strand, within B158DRAFT_1579at 1639.642 kb on + strand, within B158DRAFT_1579at 1639.647 kb on - strand, within B158DRAFT_1579at 1639.665 kb on - strand, within B158DRAFT_1579at 1639.665 kb on - strand, within B158DRAFT_1579at 1639.667 kb on + strand, within B158DRAFT_1579at 1639.685 kb on + strand, within B158DRAFT_1579at 1639.693 kb on - strand, within B158DRAFT_1579at 1639.695 kb on + strand, within B158DRAFT_1579at 1639.695 kb on + strand, within B158DRAFT_1579at 1639.703 kb on - strand, within B158DRAFT_1579at 1639.727 kb on + strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.735 kb on - strand, within B158DRAFT_1579at 1639.787 kb on + strand, within B158DRAFT_1579at 1639.901 kb on + strand, within B158DRAFT_1579at 1639.926 kb on + strand, within B158DRAFT_1579at 1639.926 kb on + strand, within B158DRAFT_1579at 1639.926 kb on + strand, within B158DRAFT_1579at 1639.934 kb on + strand, within B158DRAFT_1579at 1639.942 kb on - strand, within B158DRAFT_1579at 1639.970 kb on + strand, within B158DRAFT_1579at 1640.083 kb on - strand, within B158DRAFT_1579at 1640.168 kb on - strand, within B158DRAFT_1579at 1640.225 kb on + strandat 1640.291 kb on + strandat 1640.301 kb on - strandat 1640.360 kb on - strandat 1640.377 kb on - strandat 1640.379 kb on - strandat 1640.396 kb on - strandat 1640.526 kb on - strandat 1640.539 kb on + strandat 1640.551 kb on + strandat 1640.551 kb on + strandat 1640.598 kb on + strand, within B158DRAFT_1580at 1640.606 kb on - strand, within B158DRAFT_1580at 1640.606 kb on - strand, within B158DRAFT_1580at 1640.620 kb on - strand, within B158DRAFT_1580at 1640.620 kb on - strand, within B158DRAFT_1580at 1640.844 kb on - strandat 1640.924 kb on - strand, within B158DRAFT_1581at 1640.964 kb on - strand, within B158DRAFT_1581at 1640.989 kb on - strand, within B158DRAFT_1581at 1640.989 kb on - strand, within B158DRAFT_1581at 1641.238 kb on - strand, within B158DRAFT_1581at 1641.250 kb on + strand, within B158DRAFT_1581at 1641.250 kb on + strand, within B158DRAFT_1581at 1641.250 kb on + strand, within B158DRAFT_1581at 1641.258 kb on - strand, within B158DRAFT_1581at 1641.258 kb on - strand, within B158DRAFT_1581at 1641.261 kb on + strand, within B158DRAFT_1581at 1641.295 kb on - strand, within B158DRAFT_1581at 1641.385 kb on + strand, within B158DRAFT_1581at 1641.393 kb on - strand, within B158DRAFT_1581

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,637,419 + B158DRAFT_1578 0.60 -0.4
1,637,474 - B158DRAFT_1578 0.63 +1.0
1,637,498 - B158DRAFT_1578 0.64 +1.0
1,637,508 + B158DRAFT_1578 0.65 -0.4
1,637,528 + B158DRAFT_1578 0.66 +0.0
1,637,528 + B158DRAFT_1578 0.66 +0.5
1,637,547 + B158DRAFT_1578 0.67 -3.2
1,637,547 + B158DRAFT_1578 0.67 -1.9
1,637,547 + B158DRAFT_1578 0.67 +0.1
1,637,547 + B158DRAFT_1578 0.67 -2.4
1,637,555 - B158DRAFT_1578 0.67 -2.3
1,637,555 - B158DRAFT_1578 0.67 +0.9
1,637,578 + B158DRAFT_1578 0.69 +0.7
1,637,586 - B158DRAFT_1578 0.69 -1.0
1,637,586 - B158DRAFT_1578 0.69 -1.0
1,637,594 + B158DRAFT_1578 0.69 +0.1
1,637,594 + B158DRAFT_1578 0.69 +2.1
1,637,602 - B158DRAFT_1578 0.70 -1.1
1,637,602 - B158DRAFT_1578 0.70 -0.8
1,637,627 + B158DRAFT_1578 0.71 -1.1
1,637,627 + B158DRAFT_1578 0.71 -1.3
1,637,635 - B158DRAFT_1578 0.72 -0.2
1,637,635 - B158DRAFT_1578 0.72 -1.1
1,637,658 - B158DRAFT_1578 0.73 +0.5
1,637,671 - B158DRAFT_1578 0.74 -3.1
1,637,691 + B158DRAFT_1578 0.75 +0.5
1,637,691 + B158DRAFT_1578 0.75 -1.3
1,637,696 + B158DRAFT_1578 0.75 -0.5
1,637,699 - B158DRAFT_1578 0.75 -1.7
1,637,833 + B158DRAFT_1578 0.82 +0.2
1,637,833 + B158DRAFT_1578 0.82 -2.0
1,637,833 + B158DRAFT_1578 0.82 -0.3
1,637,841 - B158DRAFT_1578 0.83 +0.1
1,637,841 - B158DRAFT_1578 0.83 -0.4
1,637,841 - B158DRAFT_1578 0.83 +0.7
1,637,841 - B158DRAFT_1578 0.83 -1.3
1,637,874 + B158DRAFT_1578 0.84 +0.7
1,637,908 + B158DRAFT_1578 0.86 +0.7
1,637,915 + B158DRAFT_1578 0.87 -1.9
1,637,916 - B158DRAFT_1578 0.87 -0.9
1,637,923 - B158DRAFT_1578 0.87 -0.0
1,637,947 + B158DRAFT_1578 0.88 +0.1
1,638,001 - -0.1
1,638,006 - +1.3
1,638,010 + +0.2
1,638,018 - -1.3
1,638,025 + -1.2
1,638,025 + +0.1
1,638,025 + +0.1
1,638,025 + -0.2
1,638,025 + -1.1
1,638,025 + -0.5
1,638,025 + -1.5
1,638,033 - -1.4
1,638,033 - -0.8
1,638,033 - -0.7
1,638,033 - +1.5
1,638,033 - +0.4
1,638,087 + -2.2
1,638,235 - -0.1
1,638,235 - -0.8
1,638,337 + -0.2
1,638,360 - -1.1
1,638,360 - -0.9
1,638,401 + -1.1
1,638,419 - +0.1
1,638,460 - -0.3
1,638,474 + -1.2
1,638,474 - -2.4
1,638,489 + -0.0
1,638,549 + +0.1
1,638,559 + -1.1
1,638,623 - B158DRAFT_1579 0.11 -0.1
1,638,625 + B158DRAFT_1579 0.11 -0.1
1,638,625 + B158DRAFT_1579 0.11 -3.2
1,638,633 - B158DRAFT_1579 0.11 +0.2
1,638,643 + B158DRAFT_1579 0.12 -0.6
1,638,651 - B158DRAFT_1579 0.12 +0.8
1,638,671 + B158DRAFT_1579 0.13 +0.2
1,638,796 - B158DRAFT_1579 0.19 -0.0
1,638,866 + B158DRAFT_1579 0.23 -0.9
1,638,886 - B158DRAFT_1579 0.24 -0.2
1,638,937 + B158DRAFT_1579 0.26 -0.0
1,638,942 + B158DRAFT_1579 0.27 -0.8
1,638,945 - B158DRAFT_1579 0.27 +0.0
1,638,955 - B158DRAFT_1579 0.27 +0.3
1,638,963 - B158DRAFT_1579 0.28 -1.3
1,639,095 - B158DRAFT_1579 0.34 -0.6
1,639,205 + B158DRAFT_1579 0.40 -0.1
1,639,205 + B158DRAFT_1579 0.40 -0.2
1,639,205 + B158DRAFT_1579 0.40 -0.5
1,639,205 + B158DRAFT_1579 0.40 -3.1
1,639,205 + B158DRAFT_1579 0.40 -0.8
1,639,205 + B158DRAFT_1579 0.40 -1.0
1,639,205 + B158DRAFT_1579 0.40 -1.1
1,639,205 + B158DRAFT_1579 0.40 -0.4
1,639,205 + B158DRAFT_1579 0.40 +1.2
1,639,205 + B158DRAFT_1579 0.40 +0.1
1,639,205 + B158DRAFT_1579 0.40 -0.1
1,639,205 + B158DRAFT_1579 0.40 -0.7
1,639,205 + B158DRAFT_1579 0.40 -0.8
1,639,205 + B158DRAFT_1579 0.40 +0.2
1,639,213 - B158DRAFT_1579 0.40 -0.8
1,639,213 - B158DRAFT_1579 0.40 +0.7
1,639,213 - B158DRAFT_1579 0.40 -4.2
1,639,213 - B158DRAFT_1579 0.40 +0.8
1,639,213 - B158DRAFT_1579 0.40 +1.1
1,639,213 - B158DRAFT_1579 0.40 +0.2
1,639,213 - B158DRAFT_1579 0.40 +0.1
1,639,213 - B158DRAFT_1579 0.40 +0.5
1,639,213 - B158DRAFT_1579 0.40 +0.0
1,639,213 - B158DRAFT_1579 0.40 -1.4
1,639,213 - B158DRAFT_1579 0.40 -1.9
1,639,213 - B158DRAFT_1579 0.40 +0.3
1,639,213 - B158DRAFT_1579 0.40 +0.1
1,639,289 + B158DRAFT_1579 0.44 -0.6
1,639,295 - B158DRAFT_1579 0.44 -0.8
1,639,297 + B158DRAFT_1579 0.44 -1.0
1,639,366 + B158DRAFT_1579 0.48 -0.7
1,639,376 + B158DRAFT_1579 0.48 -0.6
1,639,376 + B158DRAFT_1579 0.48 -0.0
1,639,384 - B158DRAFT_1579 0.48 +0.7
1,639,389 - B158DRAFT_1579 0.49 +0.3
1,639,389 - B158DRAFT_1579 0.49 -0.1
1,639,389 - B158DRAFT_1579 0.49 -0.6
1,639,389 - B158DRAFT_1579 0.49 -0.8
1,639,431 - B158DRAFT_1579 0.51 +0.1
1,639,431 - B158DRAFT_1579 0.51 +0.1
1,639,431 - B158DRAFT_1579 0.51 -0.0
1,639,491 + B158DRAFT_1579 0.54 -0.1
1,639,491 + B158DRAFT_1579 0.54 -0.5
1,639,535 + B158DRAFT_1579 0.56 -0.6
1,639,540 + B158DRAFT_1579 0.56 +0.7
1,639,639 + B158DRAFT_1579 0.61 -1.6
1,639,642 + B158DRAFT_1579 0.61 -0.1
1,639,647 - B158DRAFT_1579 0.61 -0.0
1,639,665 - B158DRAFT_1579 0.62 -0.5
1,639,665 - B158DRAFT_1579 0.62 +0.4
1,639,667 + B158DRAFT_1579 0.62 +0.4
1,639,685 + B158DRAFT_1579 0.63 -0.5
1,639,693 - B158DRAFT_1579 0.64 +0.5
1,639,695 + B158DRAFT_1579 0.64 -0.3
1,639,695 + B158DRAFT_1579 0.64 -0.4
1,639,703 - B158DRAFT_1579 0.64 +0.2
1,639,727 + B158DRAFT_1579 0.65 +0.6
1,639,735 - B158DRAFT_1579 0.66 -0.1
1,639,735 - B158DRAFT_1579 0.66 -1.0
1,639,735 - B158DRAFT_1579 0.66 -1.2
1,639,735 - B158DRAFT_1579 0.66 -0.4
1,639,787 + B158DRAFT_1579 0.68 -0.5
1,639,901 + B158DRAFT_1579 0.74 +0.5
1,639,926 + B158DRAFT_1579 0.75 -0.5
1,639,926 + B158DRAFT_1579 0.75 -1.8
1,639,926 + B158DRAFT_1579 0.75 -0.8
1,639,934 + B158DRAFT_1579 0.76 -0.6
1,639,942 - B158DRAFT_1579 0.76 +0.5
1,639,970 + B158DRAFT_1579 0.77 +0.5
1,640,083 - B158DRAFT_1579 0.83 +0.3
1,640,168 - B158DRAFT_1579 0.87 +0.0
1,640,225 + -0.4
1,640,291 + -0.6
1,640,301 - +0.4
1,640,360 - -0.6
1,640,377 - -0.2
1,640,379 - -0.3
1,640,396 - +0.3
1,640,526 - -0.9
1,640,539 + -0.4
1,640,551 + -0.0
1,640,551 + -0.3
1,640,598 + B158DRAFT_1580 0.28 +1.2
1,640,606 - B158DRAFT_1580 0.33 +0.4
1,640,606 - B158DRAFT_1580 0.33 -0.3
1,640,620 - B158DRAFT_1580 0.42 +0.3
1,640,620 - B158DRAFT_1580 0.42 +0.1
1,640,844 - -0.2
1,640,924 - B158DRAFT_1581 0.11 +0.6
1,640,964 - B158DRAFT_1581 0.13 -0.7
1,640,989 - B158DRAFT_1581 0.15 -0.0
1,640,989 - B158DRAFT_1581 0.15 -0.4
1,641,238 - B158DRAFT_1581 0.28 -0.3
1,641,250 + B158DRAFT_1581 0.29 -0.2
1,641,250 + B158DRAFT_1581 0.29 -0.2
1,641,250 + B158DRAFT_1581 0.29 -2.8
1,641,258 - B158DRAFT_1581 0.29 -1.2
1,641,258 - B158DRAFT_1581 0.29 -0.3
1,641,261 + B158DRAFT_1581 0.29 +1.2
1,641,295 - B158DRAFT_1581 0.31 -0.8
1,641,385 + B158DRAFT_1581 0.36 -0.5
1,641,393 - B158DRAFT_1581 0.36 -0.8

Or see this region's nucleotide sequence