Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1531

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1529 and B158DRAFT_1530 are separated by 86 nucleotidesB158DRAFT_1530 and B158DRAFT_1531 are separated by 139 nucleotidesB158DRAFT_1531 and B158DRAFT_1532 are separated by 15 nucleotidesB158DRAFT_1532 and B158DRAFT_1533 are separated by 68 nucleotides B158DRAFT_1529: B158DRAFT_1529 - DNA mismatch repair protein MutS, at 1,583,318 to 1,585,912 _1529 B158DRAFT_1530: B158DRAFT_1530 - competence/damage-inducible protein CinA C-terminal domain, at 1,585,999 to 1,586,520 _1530 B158DRAFT_1531: B158DRAFT_1531 - protein RecA, at 1,586,660 to 1,587,697 _1531 B158DRAFT_1532: B158DRAFT_1532 - Uncharacterized protein conserved in bacteria, at 1,587,713 to 1,588,183 _1532 B158DRAFT_1533: B158DRAFT_1533 - alanyl-tRNA synthetase (EC 6.1.1.7), at 1,588,252 to 1,590,879 _1533 Position (kb) 1586 1587 1588Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1585.671 kb on + strandat 1585.722 kb on + strandat 1585.722 kb on + strandat 1585.727 kb on + strandat 1585.732 kb on + strandat 1585.732 kb on + strandat 1585.740 kb on - strandat 1585.740 kb on - strandat 1585.740 kb on - strandat 1585.740 kb on - strandat 1585.740 kb on - strandat 1585.753 kb on - strandat 1585.770 kb on + strandat 1585.778 kb on - strandat 1585.778 kb on - strandat 1585.800 kb on + strandat 1585.853 kb on + strandat 1585.855 kb on + strandat 1585.861 kb on - strandat 1585.878 kb on - strandat 1585.945 kb on + strandat 1585.945 kb on + strandat 1585.946 kb on + strandat 1585.953 kb on - strandat 1585.971 kb on - strandat 1585.986 kb on - strandat 1585.991 kb on + strandat 1585.999 kb on - strandat 1585.999 kb on - strandat 1586.019 kb on + strandat 1586.091 kb on + strand, within B158DRAFT_1530at 1586.099 kb on - strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.103 kb on + strand, within B158DRAFT_1530at 1586.106 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.111 kb on - strand, within B158DRAFT_1530at 1586.130 kb on + strand, within B158DRAFT_1530at 1586.135 kb on + strand, within B158DRAFT_1530at 1586.135 kb on + strand, within B158DRAFT_1530at 1586.143 kb on - strand, within B158DRAFT_1530at 1586.143 kb on - strand, within B158DRAFT_1530at 1586.143 kb on - strand, within B158DRAFT_1530at 1586.143 kb on - strand, within B158DRAFT_1530at 1586.143 kb on - strand, within B158DRAFT_1530at 1586.145 kb on + strand, within B158DRAFT_1530at 1586.162 kb on + strand, within B158DRAFT_1530at 1586.162 kb on + strand, within B158DRAFT_1530at 1586.162 kb on + strand, within B158DRAFT_1530at 1586.170 kb on - strand, within B158DRAFT_1530at 1586.170 kb on - strand, within B158DRAFT_1530at 1586.186 kb on + strand, within B158DRAFT_1530at 1586.193 kb on - strand, within B158DRAFT_1530at 1586.194 kb on - strand, within B158DRAFT_1530at 1586.194 kb on - strand, within B158DRAFT_1530at 1586.211 kb on + strand, within B158DRAFT_1530at 1586.218 kb on + strand, within B158DRAFT_1530at 1586.241 kb on + strand, within B158DRAFT_1530at 1586.278 kb on - strand, within B158DRAFT_1530at 1586.302 kb on + strand, within B158DRAFT_1530at 1586.364 kb on + strand, within B158DRAFT_1530at 1586.372 kb on - strand, within B158DRAFT_1530at 1586.372 kb on - strand, within B158DRAFT_1530at 1586.383 kb on + strand, within B158DRAFT_1530at 1586.391 kb on - strand, within B158DRAFT_1530at 1586.418 kb on + strand, within B158DRAFT_1530at 1586.671 kb on - strandat 1586.702 kb on - strandat 1586.726 kb on + strandat 1586.734 kb on - strandat 1586.740 kb on - strandat 1586.744 kb on + strandat 1586.744 kb on + strandat 1586.752 kb on - strandat 1586.787 kb on + strand, within B158DRAFT_1531at 1586.812 kb on + strand, within B158DRAFT_1531at 1586.812 kb on + strand, within B158DRAFT_1531at 1586.820 kb on - strand, within B158DRAFT_1531at 1586.834 kb on - strand, within B158DRAFT_1531at 1586.848 kb on + strand, within B158DRAFT_1531at 1586.864 kb on - strand, within B158DRAFT_1531at 1586.897 kb on + strand, within B158DRAFT_1531at 1586.967 kb on + strand, within B158DRAFT_1531at 1586.967 kb on + strand, within B158DRAFT_1531at 1586.975 kb on - strand, within B158DRAFT_1531at 1586.975 kb on - strand, within B158DRAFT_1531at 1586.975 kb on - strand, within B158DRAFT_1531at 1586.982 kb on + strand, within B158DRAFT_1531at 1586.982 kb on + strand, within B158DRAFT_1531at 1586.982 kb on + strand, within B158DRAFT_1531at 1586.990 kb on - strand, within B158DRAFT_1531at 1586.990 kb on - strand, within B158DRAFT_1531at 1587.013 kb on + strand, within B158DRAFT_1531at 1587.013 kb on + strand, within B158DRAFT_1531at 1587.016 kb on + strand, within B158DRAFT_1531at 1587.023 kb on + strand, within B158DRAFT_1531at 1587.060 kb on + strand, within B158DRAFT_1531at 1587.095 kb on + strand, within B158DRAFT_1531at 1587.172 kb on + strand, within B158DRAFT_1531at 1587.172 kb on - strand, within B158DRAFT_1531at 1587.213 kb on + strand, within B158DRAFT_1531at 1587.215 kb on + strand, within B158DRAFT_1531at 1587.275 kb on + strand, within B158DRAFT_1531at 1587.299 kb on + strand, within B158DRAFT_1531at 1587.307 kb on + strand, within B158DRAFT_1531at 1587.315 kb on - strand, within B158DRAFT_1531at 1587.403 kb on + strand, within B158DRAFT_1531at 1587.403 kb on + strand, within B158DRAFT_1531at 1587.403 kb on + strand, within B158DRAFT_1531at 1587.403 kb on + strand, within B158DRAFT_1531at 1587.403 kb on + strand, within B158DRAFT_1531at 1587.408 kb on + strand, within B158DRAFT_1531at 1587.411 kb on - strand, within B158DRAFT_1531at 1587.531 kb on + strand, within B158DRAFT_1531at 1587.559 kb on + strand, within B158DRAFT_1531at 1587.566 kb on - strand, within B158DRAFT_1531at 1587.570 kb on + strand, within B158DRAFT_1531at 1587.580 kb on - strand, within B158DRAFT_1531at 1587.601 kb on + strandat 1587.609 kb on - strandat 1587.633 kb on - strandat 1587.640 kb on + strandat 1587.650 kb on + strandat 1587.658 kb on - strandat 1587.658 kb on - strandat 1587.686 kb on - strandat 1587.701 kb on + strandat 1587.709 kb on - strandat 1587.727 kb on + strandat 1587.757 kb on + strandat 1587.757 kb on + strandat 1587.787 kb on - strand, within B158DRAFT_1532at 1587.827 kb on + strand, within B158DRAFT_1532at 1587.835 kb on + strand, within B158DRAFT_1532at 1587.835 kb on + strand, within B158DRAFT_1532at 1587.835 kb on + strand, within B158DRAFT_1532at 1587.835 kb on + strand, within B158DRAFT_1532at 1587.836 kb on + strand, within B158DRAFT_1532at 1587.843 kb on - strand, within B158DRAFT_1532at 1587.843 kb on - strand, within B158DRAFT_1532at 1587.843 kb on - strand, within B158DRAFT_1532at 1587.879 kb on + strand, within B158DRAFT_1532at 1587.879 kb on - strand, within B158DRAFT_1532at 1587.893 kb on + strand, within B158DRAFT_1532at 1587.901 kb on - strand, within B158DRAFT_1532at 1587.901 kb on - strand, within B158DRAFT_1532at 1587.901 kb on - strand, within B158DRAFT_1532at 1587.932 kb on + strand, within B158DRAFT_1532at 1587.969 kb on + strand, within B158DRAFT_1532at 1587.969 kb on + strand, within B158DRAFT_1532at 1588.029 kb on - strand, within B158DRAFT_1532at 1588.071 kb on + strand, within B158DRAFT_1532at 1588.071 kb on + strand, within B158DRAFT_1532

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,585,671 + +0.3
1,585,722 + +0.3
1,585,722 + +0.2
1,585,727 + -2.3
1,585,732 + -2.7
1,585,732 + +0.8
1,585,740 - -1.3
1,585,740 - -0.8
1,585,740 - -0.7
1,585,740 - +1.1
1,585,740 - -0.5
1,585,753 - -0.0
1,585,770 + -1.4
1,585,778 - -1.0
1,585,778 - +1.2
1,585,800 + +0.2
1,585,853 + +0.3
1,585,855 + -0.5
1,585,861 - +0.0
1,585,878 - +0.6
1,585,945 + +1.4
1,585,945 + -0.5
1,585,946 + +0.7
1,585,953 - -0.7
1,585,971 - -1.3
1,585,986 - +0.1
1,585,991 + +0.5
1,585,999 - -3.6
1,585,999 - -1.6
1,586,019 + -0.2
1,586,091 + B158DRAFT_1530 0.18 -0.1
1,586,099 - B158DRAFT_1530 0.19 -0.5
1,586,103 + B158DRAFT_1530 0.20 -0.0
1,586,103 + B158DRAFT_1530 0.20 +0.3
1,586,103 + B158DRAFT_1530 0.20 -0.5
1,586,103 + B158DRAFT_1530 0.20 -0.9
1,586,103 + B158DRAFT_1530 0.20 -1.3
1,586,103 + B158DRAFT_1530 0.20 -0.0
1,586,103 + B158DRAFT_1530 0.20 -0.8
1,586,103 + B158DRAFT_1530 0.20 -2.8
1,586,103 + B158DRAFT_1530 0.20 -0.0
1,586,103 + B158DRAFT_1530 0.20 +1.2
1,586,103 + B158DRAFT_1530 0.20 -0.2
1,586,103 + B158DRAFT_1530 0.20 -0.5
1,586,103 + B158DRAFT_1530 0.20 -2.8
1,586,103 + B158DRAFT_1530 0.20 +0.9
1,586,103 + B158DRAFT_1530 0.20 +0.4
1,586,103 + B158DRAFT_1530 0.20 -0.3
1,586,103 + B158DRAFT_1530 0.20 -0.1
1,586,106 - B158DRAFT_1530 0.20 -0.9
1,586,111 - B158DRAFT_1530 0.21 +0.1
1,586,111 - B158DRAFT_1530 0.21 +0.6
1,586,111 - B158DRAFT_1530 0.21 -0.4
1,586,111 - B158DRAFT_1530 0.21 -0.9
1,586,111 - B158DRAFT_1530 0.21 -0.4
1,586,111 - B158DRAFT_1530 0.21 -0.0
1,586,111 - B158DRAFT_1530 0.21 -0.6
1,586,111 - B158DRAFT_1530 0.21 +0.7
1,586,111 - B158DRAFT_1530 0.21 +0.0
1,586,111 - B158DRAFT_1530 0.21 +0.5
1,586,111 - B158DRAFT_1530 0.21 +0.4
1,586,111 - B158DRAFT_1530 0.21 +0.4
1,586,111 - B158DRAFT_1530 0.21 -0.7
1,586,111 - B158DRAFT_1530 0.21 -0.0
1,586,111 - B158DRAFT_1530 0.21 +0.7
1,586,111 - B158DRAFT_1530 0.21 +0.7
1,586,111 - B158DRAFT_1530 0.21 -0.4
1,586,111 - B158DRAFT_1530 0.21 +0.1
1,586,111 - B158DRAFT_1530 0.21 +0.0
1,586,111 - B158DRAFT_1530 0.21 -1.0
1,586,130 + B158DRAFT_1530 0.25 -0.4
1,586,135 + B158DRAFT_1530 0.26 +0.4
1,586,135 + B158DRAFT_1530 0.26 -1.8
1,586,143 - B158DRAFT_1530 0.28 -0.2
1,586,143 - B158DRAFT_1530 0.28 -0.1
1,586,143 - B158DRAFT_1530 0.28 -0.0
1,586,143 - B158DRAFT_1530 0.28 -1.6
1,586,143 - B158DRAFT_1530 0.28 -1.1
1,586,145 + B158DRAFT_1530 0.28 +0.4
1,586,162 + B158DRAFT_1530 0.31 -1.1
1,586,162 + B158DRAFT_1530 0.31 -1.3
1,586,162 + B158DRAFT_1530 0.31 -0.1
1,586,170 - B158DRAFT_1530 0.33 -0.7
1,586,170 - B158DRAFT_1530 0.33 -0.9
1,586,186 + B158DRAFT_1530 0.36 -0.4
1,586,193 - B158DRAFT_1530 0.37 +0.3
1,586,194 - B158DRAFT_1530 0.37 -0.3
1,586,194 - B158DRAFT_1530 0.37 -0.3
1,586,211 + B158DRAFT_1530 0.41 -0.0
1,586,218 + B158DRAFT_1530 0.42 -1.0
1,586,241 + B158DRAFT_1530 0.46 +0.2
1,586,278 - B158DRAFT_1530 0.53 +0.2
1,586,302 + B158DRAFT_1530 0.58 -0.2
1,586,364 + B158DRAFT_1530 0.70 -2.6
1,586,372 - B158DRAFT_1530 0.71 +0.2
1,586,372 - B158DRAFT_1530 0.71 +0.5
1,586,383 + B158DRAFT_1530 0.74 +0.2
1,586,391 - B158DRAFT_1530 0.75 -1.2
1,586,418 + B158DRAFT_1530 0.80 +1.0
1,586,671 - -3.4
1,586,702 - -4.3
1,586,726 + -1.3
1,586,734 - -2.6
1,586,740 - -2.1
1,586,744 + -2.6
1,586,744 + -3.1
1,586,752 - -3.3
1,586,787 + B158DRAFT_1531 0.12 -1.2
1,586,812 + B158DRAFT_1531 0.15 -2.0
1,586,812 + B158DRAFT_1531 0.15 -2.5
1,586,820 - B158DRAFT_1531 0.15 -2.9
1,586,834 - B158DRAFT_1531 0.17 -2.3
1,586,848 + B158DRAFT_1531 0.18 -1.0
1,586,864 - B158DRAFT_1531 0.20 -2.7
1,586,897 + B158DRAFT_1531 0.23 -2.5
1,586,967 + B158DRAFT_1531 0.30 -2.3
1,586,967 + B158DRAFT_1531 0.30 -2.6
1,586,975 - B158DRAFT_1531 0.30 +0.3
1,586,975 - B158DRAFT_1531 0.30 -2.5
1,586,975 - B158DRAFT_1531 0.30 +0.3
1,586,982 + B158DRAFT_1531 0.31 -1.8
1,586,982 + B158DRAFT_1531 0.31 -2.7
1,586,982 + B158DRAFT_1531 0.31 -3.0
1,586,990 - B158DRAFT_1531 0.32 -0.2
1,586,990 - B158DRAFT_1531 0.32 -1.8
1,587,013 + B158DRAFT_1531 0.34 -2.3
1,587,013 + B158DRAFT_1531 0.34 -3.6
1,587,016 + B158DRAFT_1531 0.34 -1.8
1,587,023 + B158DRAFT_1531 0.35 -2.6
1,587,060 + B158DRAFT_1531 0.39 +0.5
1,587,095 + B158DRAFT_1531 0.42 -3.0
1,587,172 + B158DRAFT_1531 0.49 -4.5
1,587,172 - B158DRAFT_1531 0.49 -2.1
1,587,213 + B158DRAFT_1531 0.53 -3.8
1,587,215 + B158DRAFT_1531 0.53 -1.5
1,587,275 + B158DRAFT_1531 0.59 -2.2
1,587,299 + B158DRAFT_1531 0.62 -1.6
1,587,307 + B158DRAFT_1531 0.62 -1.9
1,587,315 - B158DRAFT_1531 0.63 -2.3
1,587,403 + B158DRAFT_1531 0.72 -3.0
1,587,403 + B158DRAFT_1531 0.72 -2.6
1,587,403 + B158DRAFT_1531 0.72 -2.7
1,587,403 + B158DRAFT_1531 0.72 -2.8
1,587,403 + B158DRAFT_1531 0.72 -0.0
1,587,408 + B158DRAFT_1531 0.72 -4.0
1,587,411 - B158DRAFT_1531 0.72 -2.8
1,587,531 + B158DRAFT_1531 0.84 -2.0
1,587,559 + B158DRAFT_1531 0.87 -2.1
1,587,566 - B158DRAFT_1531 0.87 -4.4
1,587,570 + B158DRAFT_1531 0.88 -1.8
1,587,580 - B158DRAFT_1531 0.89 -2.9
1,587,601 + -2.3
1,587,609 - -0.7
1,587,633 - -5.1
1,587,640 + -1.2
1,587,650 + -1.5
1,587,658 - -2.0
1,587,658 - -2.3
1,587,686 - -3.4
1,587,701 + -1.2
1,587,709 - -1.3
1,587,727 + -0.1
1,587,757 + -1.2
1,587,757 + -1.8
1,587,787 - B158DRAFT_1532 0.16 -0.7
1,587,827 + B158DRAFT_1532 0.24 -1.7
1,587,835 + B158DRAFT_1532 0.26 -0.0
1,587,835 + B158DRAFT_1532 0.26 -0.6
1,587,835 + B158DRAFT_1532 0.26 -0.1
1,587,835 + B158DRAFT_1532 0.26 +0.4
1,587,836 + B158DRAFT_1532 0.26 -1.3
1,587,843 - B158DRAFT_1532 0.28 -0.5
1,587,843 - B158DRAFT_1532 0.28 -1.1
1,587,843 - B158DRAFT_1532 0.28 -0.6
1,587,879 + B158DRAFT_1532 0.35 -0.5
1,587,879 - B158DRAFT_1532 0.35 -0.7
1,587,893 + B158DRAFT_1532 0.38 -1.1
1,587,901 - B158DRAFT_1532 0.40 -0.6
1,587,901 - B158DRAFT_1532 0.40 -0.5
1,587,901 - B158DRAFT_1532 0.40 +0.2
1,587,932 + B158DRAFT_1532 0.46 -0.4
1,587,969 + B158DRAFT_1532 0.54 +0.6
1,587,969 + B158DRAFT_1532 0.54 -0.0
1,588,029 - B158DRAFT_1532 0.67 -1.0
1,588,071 + B158DRAFT_1532 0.76 -3.5
1,588,071 + B158DRAFT_1532 0.76 -0.0

Or see this region's nucleotide sequence