Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1384 and B158DRAFT_1385 overlap by 11 nucleotides B158DRAFT_1385 and B158DRAFT_1386 are separated by 722 nucleotides B158DRAFT_1386 and B158DRAFT_1387 are separated by 81 nucleotides
B158DRAFT_1384: B158DRAFT_1384 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54), at 1,429,010 to 1,430,071
_1384
B158DRAFT_1385: B158DRAFT_1385 - Prephenate dehydratase, at 1,430,061 to 1,431,263
_1385
B158DRAFT_1386: B158DRAFT_1386 - phage shock protein C (PspC) family protein, at 1,431,986 to 1,432,165
_1386
B158DRAFT_1387: B158DRAFT_1387 - gamma-glutamyltranspeptidase, at 1,432,247 to 1,433,989
_1387
Position (kb)
1430
1431
1432 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1429.070 kb on + strand at 1429.102 kb on - strand at 1429.160 kb on - strand, within B158DRAFT_1384 at 1429.208 kb on + strand, within B158DRAFT_1384 at 1429.269 kb on - strand, within B158DRAFT_1384 at 1429.289 kb on - strand, within B158DRAFT_1384 at 1429.377 kb on + strand, within B158DRAFT_1384 at 1429.387 kb on - strand, within B158DRAFT_1384 at 1429.390 kb on - strand, within B158DRAFT_1384 at 1429.391 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.520 kb on - strand, within B158DRAFT_1384 at 1429.531 kb on + strand, within B158DRAFT_1384 at 1429.533 kb on + strand, within B158DRAFT_1384 at 1429.533 kb on + strand, within B158DRAFT_1384 at 1429.574 kb on - strand, within B158DRAFT_1384 at 1429.615 kb on + strand, within B158DRAFT_1384 at 1429.642 kb on + strand, within B158DRAFT_1384 at 1429.642 kb on + strand, within B158DRAFT_1384 at 1429.650 kb on - strand, within B158DRAFT_1384 at 1429.729 kb on - strand, within B158DRAFT_1384 at 1429.799 kb on + strand, within B158DRAFT_1384 at 1429.799 kb on + strand, within B158DRAFT_1384 at 1429.959 kb on + strand, within B158DRAFT_1384 at 1430.048 kb on - strand at 1430.182 kb on + strand, within B158DRAFT_1385 at 1430.253 kb on - strand, within B158DRAFT_1385 at 1430.253 kb on - strand, within B158DRAFT_1385 at 1430.253 kb on - strand, within B158DRAFT_1385 at 1430.312 kb on + strand, within B158DRAFT_1385 at 1430.320 kb on - strand, within B158DRAFT_1385 at 1430.337 kb on + strand, within B158DRAFT_1385 at 1430.602 kb on - strand, within B158DRAFT_1385 at 1430.626 kb on + strand, within B158DRAFT_1385 at 1430.672 kb on + strand, within B158DRAFT_1385 at 1430.672 kb on + strand, within B158DRAFT_1385 at 1430.672 kb on + strand, within B158DRAFT_1385 at 1430.680 kb on - strand, within B158DRAFT_1385 at 1430.680 kb on - strand, within B158DRAFT_1385 at 1430.799 kb on + strand, within B158DRAFT_1385 at 1430.799 kb on + strand, within B158DRAFT_1385 at 1430.799 kb on + strand, within B158DRAFT_1385 at 1430.807 kb on - strand, within B158DRAFT_1385 at 1430.807 kb on - strand, within B158DRAFT_1385 at 1430.807 kb on - strand, within B158DRAFT_1385 at 1431.158 kb on + strand at 1431.158 kb on + strand at 1431.246 kb on + strand at 1431.283 kb on - strand at 1431.384 kb on + strand at 1431.392 kb on - strand at 1431.459 kb on - strand at 1431.513 kb on + strand at 1431.620 kb on + strand at 1431.784 kb on + strand at 1431.843 kb on + strand at 1431.846 kb on - strand at 1431.851 kb on + strand at 1431.859 kb on - strand at 1431.951 kb on + strand at 1432.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,429,070 + +0.2 1,429,102 - -0.5 1,429,160 - B158DRAFT_1384 0.14 +0.2 1,429,208 + B158DRAFT_1384 0.19 -3.1 1,429,269 - B158DRAFT_1384 0.24 -0.1 1,429,289 - B158DRAFT_1384 0.26 -1.9 1,429,377 + B158DRAFT_1384 0.35 -0.8 1,429,387 - B158DRAFT_1384 0.35 +0.1 1,429,390 - B158DRAFT_1384 0.36 -0.1 1,429,391 + B158DRAFT_1384 0.36 -0.0 1,429,500 + B158DRAFT_1384 0.46 -0.5 1,429,500 + B158DRAFT_1384 0.46 -0.4 1,429,500 + B158DRAFT_1384 0.46 +0.0 1,429,500 + B158DRAFT_1384 0.46 -1.6 1,429,508 - B158DRAFT_1384 0.47 -1.0 1,429,508 - B158DRAFT_1384 0.47 -0.6 1,429,508 - B158DRAFT_1384 0.47 -2.9 1,429,508 - B158DRAFT_1384 0.47 -0.5 1,429,508 - B158DRAFT_1384 0.47 -1.0 1,429,520 - B158DRAFT_1384 0.48 +0.1 1,429,531 + B158DRAFT_1384 0.49 +0.4 1,429,533 + B158DRAFT_1384 0.49 -0.2 1,429,533 + B158DRAFT_1384 0.49 -1.6 1,429,574 - B158DRAFT_1384 0.53 +0.5 1,429,615 + B158DRAFT_1384 0.57 -1.0 1,429,642 + B158DRAFT_1384 0.60 +0.0 1,429,642 + B158DRAFT_1384 0.60 -0.1 1,429,650 - B158DRAFT_1384 0.60 -2.3 1,429,729 - B158DRAFT_1384 0.68 -0.4 1,429,799 + B158DRAFT_1384 0.74 +0.1 1,429,799 + B158DRAFT_1384 0.74 -0.6 1,429,959 + B158DRAFT_1384 0.89 -0.4 1,430,048 - -3.8 1,430,182 + B158DRAFT_1385 0.10 -0.5 1,430,253 - B158DRAFT_1385 0.16 +0.5 1,430,253 - B158DRAFT_1385 0.16 -0.4 1,430,253 - B158DRAFT_1385 0.16 -0.1 1,430,312 + B158DRAFT_1385 0.21 -0.8 1,430,320 - B158DRAFT_1385 0.22 -0.4 1,430,337 + B158DRAFT_1385 0.23 -1.0 1,430,602 - B158DRAFT_1385 0.45 +0.2 1,430,626 + B158DRAFT_1385 0.47 -1.6 1,430,672 + B158DRAFT_1385 0.51 +0.6 1,430,672 + B158DRAFT_1385 0.51 -0.6 1,430,672 + B158DRAFT_1385 0.51 -1.6 1,430,680 - B158DRAFT_1385 0.51 +0.2 1,430,680 - B158DRAFT_1385 0.51 +0.1 1,430,799 + B158DRAFT_1385 0.61 +0.4 1,430,799 + B158DRAFT_1385 0.61 -0.7 1,430,799 + B158DRAFT_1385 0.61 -2.7 1,430,807 - B158DRAFT_1385 0.62 -0.3 1,430,807 - B158DRAFT_1385 0.62 -0.4 1,430,807 - B158DRAFT_1385 0.62 +0.0 1,431,158 + -0.5 1,431,158 + +0.3 1,431,246 + +1.0 1,431,283 - +0.5 1,431,384 + -0.2 1,431,392 - +0.5 1,431,459 - -0.4 1,431,513 + +0.7 1,431,620 + -0.4 1,431,784 + -0.3 1,431,843 + +1.1 1,431,846 - +0.2 1,431,851 + +0.6 1,431,859 - -0.5 1,431,951 + +0.9 1,432,248 - +0.6
Or see this region's nucleotide sequence