Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1176

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1173 and B158DRAFT_1174 are separated by 3 nucleotidesB158DRAFT_1174 and B158DRAFT_1175 are separated by 86 nucleotidesB158DRAFT_1175 and B158DRAFT_1176 are separated by 429 nucleotidesB158DRAFT_1176 and B158DRAFT_1177 are separated by 10 nucleotides B158DRAFT_1173: B158DRAFT_1173 - hypothetical protein, at 1,213,925 to 1,214,395 _1173 B158DRAFT_1174: B158DRAFT_1174 - Predicted transcriptional regulators, at 1,214,399 to 1,214,623 _1174 B158DRAFT_1175: B158DRAFT_1175 - tRNA_Leu_CAA, at 1,214,710 to 1,214,796 _1175 B158DRAFT_1176: B158DRAFT_1176 - hypothetical protein, at 1,215,226 to 1,216,104 _1176 B158DRAFT_1177: B158DRAFT_1177 - hypothetical protein, at 1,216,115 to 1,217,236 _1177 Position (kb) 1215 1216 1217Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1214.287 kb on + strand, within B158DRAFT_1173at 1214.295 kb on - strand, within B158DRAFT_1173at 1214.296 kb on + strand, within B158DRAFT_1173at 1214.296 kb on + strand, within B158DRAFT_1173at 1214.301 kb on + strand, within B158DRAFT_1173at 1214.309 kb on - strand, within B158DRAFT_1173at 1214.389 kb on + strandat 1214.389 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.402 kb on - strandat 1214.438 kb on + strand, within B158DRAFT_1174at 1214.521 kb on + strand, within B158DRAFT_1174at 1214.563 kb on + strand, within B158DRAFT_1174at 1214.563 kb on + strand, within B158DRAFT_1174at 1214.571 kb on - strand, within B158DRAFT_1174at 1214.585 kb on + strand, within B158DRAFT_1174at 1214.593 kb on - strand, within B158DRAFT_1174at 1214.627 kb on + strandat 1214.635 kb on - strandat 1214.635 kb on - strandat 1214.906 kb on + strandat 1214.914 kb on - strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1215.281 kb on - strandat 1215.297 kb on + strandat 1215.343 kb on - strand, within B158DRAFT_1176at 1215.343 kb on - strand, within B158DRAFT_1176at 1215.348 kb on - strand, within B158DRAFT_1176at 1215.356 kb on + strand, within B158DRAFT_1176at 1215.384 kb on - strand, within B158DRAFT_1176at 1215.397 kb on + strand, within B158DRAFT_1176at 1215.405 kb on - strand, within B158DRAFT_1176at 1215.422 kb on + strand, within B158DRAFT_1176at 1215.422 kb on + strand, within B158DRAFT_1176at 1215.430 kb on - strand, within B158DRAFT_1176at 1215.475 kb on - strand, within B158DRAFT_1176at 1215.480 kb on - strand, within B158DRAFT_1176at 1215.498 kb on - strand, within B158DRAFT_1176at 1215.521 kb on + strand, within B158DRAFT_1176at 1215.526 kb on + strand, within B158DRAFT_1176at 1215.534 kb on - strand, within B158DRAFT_1176at 1215.543 kb on - strand, within B158DRAFT_1176at 1215.557 kb on + strand, within B158DRAFT_1176at 1215.589 kb on - strand, within B158DRAFT_1176at 1215.600 kb on - strand, within B158DRAFT_1176at 1215.600 kb on - strand, within B158DRAFT_1176at 1215.637 kb on - strand, within B158DRAFT_1176at 1215.662 kb on + strand, within B158DRAFT_1176at 1215.668 kb on - strand, within B158DRAFT_1176at 1215.675 kb on + strand, within B158DRAFT_1176at 1215.675 kb on + strand, within B158DRAFT_1176at 1215.692 kb on + strand, within B158DRAFT_1176at 1215.709 kb on - strand, within B158DRAFT_1176at 1215.815 kb on + strand, within B158DRAFT_1176at 1215.823 kb on - strand, within B158DRAFT_1176at 1215.833 kb on - strand, within B158DRAFT_1176at 1215.958 kb on - strand, within B158DRAFT_1176at 1215.958 kb on - strand, within B158DRAFT_1176at 1215.983 kb on + strand, within B158DRAFT_1176at 1215.991 kb on - strand, within B158DRAFT_1176at 1215.991 kb on - strand, within B158DRAFT_1176at 1215.991 kb on - strand, within B158DRAFT_1176at 1215.997 kb on + strand, within B158DRAFT_1176at 1215.997 kb on + strand, within B158DRAFT_1176at 1216.022 kb on - strandat 1216.048 kb on + strandat 1216.051 kb on - strandat 1216.106 kb on - strandat 1216.164 kb on + strandat 1216.225 kb on - strandat 1216.259 kb on + strand, within B158DRAFT_1177at 1216.266 kb on + strand, within B158DRAFT_1177at 1216.266 kb on + strand, within B158DRAFT_1177at 1216.267 kb on - strand, within B158DRAFT_1177at 1216.267 kb on - strand, within B158DRAFT_1177at 1216.278 kb on + strand, within B158DRAFT_1177at 1216.286 kb on - strand, within B158DRAFT_1177at 1216.315 kb on + strand, within B158DRAFT_1177at 1216.321 kb on + strand, within B158DRAFT_1177at 1216.324 kb on - strand, within B158DRAFT_1177at 1216.329 kb on - strand, within B158DRAFT_1177at 1216.334 kb on - strand, within B158DRAFT_1177at 1216.447 kb on - strand, within B158DRAFT_1177at 1216.472 kb on - strand, within B158DRAFT_1177at 1216.531 kb on + strand, within B158DRAFT_1177at 1216.654 kb on + strand, within B158DRAFT_1177at 1216.654 kb on + strand, within B158DRAFT_1177at 1216.662 kb on - strand, within B158DRAFT_1177at 1216.662 kb on - strand, within B158DRAFT_1177at 1216.662 kb on - strand, within B158DRAFT_1177at 1216.668 kb on + strand, within B158DRAFT_1177at 1216.702 kb on - strand, within B158DRAFT_1177at 1216.741 kb on + strand, within B158DRAFT_1177at 1216.764 kb on - strand, within B158DRAFT_1177at 1216.798 kb on + strand, within B158DRAFT_1177at 1216.842 kb on - strand, within B158DRAFT_1177at 1216.876 kb on + strand, within B158DRAFT_1177at 1216.981 kb on + strand, within B158DRAFT_1177at 1216.994 kb on + strand, within B158DRAFT_1177at 1217.002 kb on - strand, within B158DRAFT_1177at 1217.002 kb on - strand, within B158DRAFT_1177at 1217.002 kb on - strand, within B158DRAFT_1177at 1217.012 kb on - strand, within B158DRAFT_1177at 1217.012 kb on - strand, within B158DRAFT_1177at 1217.012 kb on - strand, within B158DRAFT_1177at 1217.022 kb on + strand, within B158DRAFT_1177at 1217.022 kb on + strand, within B158DRAFT_1177at 1217.022 kb on + strand, within B158DRAFT_1177at 1217.039 kb on + strand, within B158DRAFT_1177at 1217.039 kb on + strand, within B158DRAFT_1177at 1217.044 kb on + strand, within B158DRAFT_1177at 1217.061 kb on - strand, within B158DRAFT_1177at 1217.082 kb on + strand, within B158DRAFT_1177

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,214,287 + B158DRAFT_1173 0.77 +0.0
1,214,295 - B158DRAFT_1173 0.79 -1.0
1,214,296 + B158DRAFT_1173 0.79 -1.8
1,214,296 + B158DRAFT_1173 0.79 -0.8
1,214,301 + B158DRAFT_1173 0.80 +0.4
1,214,309 - B158DRAFT_1173 0.82 +1.3
1,214,389 + -0.1
1,214,389 + -0.1
1,214,394 + -2.2
1,214,394 + -0.1
1,214,394 + -0.2
1,214,394 + -0.7
1,214,394 + +0.1
1,214,394 + -0.8
1,214,394 + +1.7
1,214,402 - +0.7
1,214,438 + B158DRAFT_1174 0.17 -0.4
1,214,521 + B158DRAFT_1174 0.54 -0.4
1,214,563 + B158DRAFT_1174 0.73 +1.1
1,214,563 + B158DRAFT_1174 0.73 +0.0
1,214,571 - B158DRAFT_1174 0.76 +0.4
1,214,585 + B158DRAFT_1174 0.83 -0.7
1,214,593 - B158DRAFT_1174 0.86 -0.1
1,214,627 + -0.8
1,214,635 - +0.3
1,214,635 - -0.2
1,214,906 + -0.4
1,214,914 - +0.5
1,214,916 + -0.3
1,214,916 + -1.4
1,214,916 + -0.1
1,214,916 + -0.4
1,214,916 + -0.2
1,214,924 - -0.2
1,214,924 - +0.1
1,214,924 - +0.2
1,214,924 - +0.5
1,215,281 - -2.2
1,215,297 + -0.4
1,215,343 - B158DRAFT_1176 0.13 -0.3
1,215,343 - B158DRAFT_1176 0.13 +0.5
1,215,348 - B158DRAFT_1176 0.14 -0.5
1,215,356 + B158DRAFT_1176 0.15 -0.2
1,215,384 - B158DRAFT_1176 0.18 -0.2
1,215,397 + B158DRAFT_1176 0.19 -0.7
1,215,405 - B158DRAFT_1176 0.20 +0.4
1,215,422 + B158DRAFT_1176 0.22 +0.1
1,215,422 + B158DRAFT_1176 0.22 -0.7
1,215,430 - B158DRAFT_1176 0.23 -0.4
1,215,475 - B158DRAFT_1176 0.28 +0.7
1,215,480 - B158DRAFT_1176 0.29 -0.2
1,215,498 - B158DRAFT_1176 0.31 +0.2
1,215,521 + B158DRAFT_1176 0.34 -0.3
1,215,526 + B158DRAFT_1176 0.34 -0.2
1,215,534 - B158DRAFT_1176 0.35 -1.3
1,215,543 - B158DRAFT_1176 0.36 -0.1
1,215,557 + B158DRAFT_1176 0.38 -0.6
1,215,589 - B158DRAFT_1176 0.41 -0.2
1,215,600 - B158DRAFT_1176 0.43 +2.0
1,215,600 - B158DRAFT_1176 0.43 +0.0
1,215,637 - B158DRAFT_1176 0.47 -0.0
1,215,662 + B158DRAFT_1176 0.50 +0.2
1,215,668 - B158DRAFT_1176 0.50 +0.2
1,215,675 + B158DRAFT_1176 0.51 -0.1
1,215,675 + B158DRAFT_1176 0.51 -3.3
1,215,692 + B158DRAFT_1176 0.53 -1.3
1,215,709 - B158DRAFT_1176 0.55 -0.0
1,215,815 + B158DRAFT_1176 0.67 -1.1
1,215,823 - B158DRAFT_1176 0.68 -0.5
1,215,833 - B158DRAFT_1176 0.69 +0.2
1,215,958 - B158DRAFT_1176 0.83 -0.7
1,215,958 - B158DRAFT_1176 0.83 +0.2
1,215,983 + B158DRAFT_1176 0.86 -0.1
1,215,991 - B158DRAFT_1176 0.87 +1.0
1,215,991 - B158DRAFT_1176 0.87 +0.5
1,215,991 - B158DRAFT_1176 0.87 +0.1
1,215,997 + B158DRAFT_1176 0.88 -0.2
1,215,997 + B158DRAFT_1176 0.88 -0.3
1,216,022 - +0.6
1,216,048 + -0.8
1,216,051 - +0.8
1,216,106 - -0.0
1,216,164 + +0.6
1,216,225 - -0.7
1,216,259 + B158DRAFT_1177 0.13 -0.5
1,216,266 + B158DRAFT_1177 0.13 +1.5
1,216,266 + B158DRAFT_1177 0.13 +0.4
1,216,267 - B158DRAFT_1177 0.14 +0.4
1,216,267 - B158DRAFT_1177 0.14 -0.9
1,216,278 + B158DRAFT_1177 0.15 +0.1
1,216,286 - B158DRAFT_1177 0.15 -2.4
1,216,315 + B158DRAFT_1177 0.18 +0.3
1,216,321 + B158DRAFT_1177 0.18 +0.8
1,216,324 - B158DRAFT_1177 0.19 +1.1
1,216,329 - B158DRAFT_1177 0.19 -0.2
1,216,334 - B158DRAFT_1177 0.20 -0.8
1,216,447 - B158DRAFT_1177 0.30 -0.6
1,216,472 - B158DRAFT_1177 0.32 +0.7
1,216,531 + B158DRAFT_1177 0.37 -0.4
1,216,654 + B158DRAFT_1177 0.48 +0.1
1,216,654 + B158DRAFT_1177 0.48 +0.1
1,216,662 - B158DRAFT_1177 0.49 -0.7
1,216,662 - B158DRAFT_1177 0.49 -2.1
1,216,662 - B158DRAFT_1177 0.49 +0.4
1,216,668 + B158DRAFT_1177 0.49 -0.1
1,216,702 - B158DRAFT_1177 0.52 -0.4
1,216,741 + B158DRAFT_1177 0.56 +0.9
1,216,764 - B158DRAFT_1177 0.58 -0.1
1,216,798 + B158DRAFT_1177 0.61 +0.0
1,216,842 - B158DRAFT_1177 0.65 -0.1
1,216,876 + B158DRAFT_1177 0.68 +0.1
1,216,981 + B158DRAFT_1177 0.77 -0.1
1,216,994 + B158DRAFT_1177 0.78 -0.3
1,217,002 - B158DRAFT_1177 0.79 +0.0
1,217,002 - B158DRAFT_1177 0.79 -0.8
1,217,002 - B158DRAFT_1177 0.79 +0.4
1,217,012 - B158DRAFT_1177 0.80 -1.6
1,217,012 - B158DRAFT_1177 0.80 -0.8
1,217,012 - B158DRAFT_1177 0.80 +2.6
1,217,022 + B158DRAFT_1177 0.81 -0.7
1,217,022 + B158DRAFT_1177 0.81 +0.2
1,217,022 + B158DRAFT_1177 0.81 -0.4
1,217,039 + B158DRAFT_1177 0.82 +0.0
1,217,039 + B158DRAFT_1177 0.82 +0.3
1,217,044 + B158DRAFT_1177 0.83 +0.5
1,217,061 - B158DRAFT_1177 0.84 +0.6
1,217,082 + B158DRAFT_1177 0.86 +0.1

Or see this region's nucleotide sequence