Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1078

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1077 and B158DRAFT_1078 are separated by 6 nucleotidesB158DRAFT_1078 and B158DRAFT_1080 are separated by 417 nucleotides B158DRAFT_1077: B158DRAFT_1077 - Fatty-acid desaturase, at 1,115,807 to 1,116,718 _1077 B158DRAFT_1078: B158DRAFT_1078 - hypothetical protein, at 1,116,725 to 1,117,114 _1078 B158DRAFT_1080: B158DRAFT_1080 - ribosomal protein S2, bacterial type, at 1,117,532 to 1,118,266 _1080 Position (kb) 1116 1117 1118Strain fitness (log2 ratio) -2 -1 0 1 2at 1115.730 kb on - strandat 1115.735 kb on - strandat 1115.751 kb on + strandat 1115.764 kb on + strandat 1115.764 kb on + strandat 1115.764 kb on + strandat 1115.772 kb on + strandat 1115.772 kb on - strandat 1115.772 kb on - strandat 1115.785 kb on + strandat 1115.845 kb on - strandat 1115.845 kb on - strandat 1115.870 kb on - strandat 1115.879 kb on - strandat 1115.880 kb on - strandat 1115.899 kb on - strand, within B158DRAFT_1077at 1115.984 kb on - strand, within B158DRAFT_1077at 1116.043 kb on + strand, within B158DRAFT_1077at 1116.076 kb on + strand, within B158DRAFT_1077at 1116.076 kb on + strand, within B158DRAFT_1077at 1116.076 kb on + strand, within B158DRAFT_1077at 1116.079 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.184 kb on + strand, within B158DRAFT_1077at 1116.192 kb on - strand, within B158DRAFT_1077at 1116.199 kb on - strand, within B158DRAFT_1077at 1116.199 kb on - strand, within B158DRAFT_1077at 1116.199 kb on - strand, within B158DRAFT_1077at 1116.201 kb on + strand, within B158DRAFT_1077at 1116.317 kb on + strand, within B158DRAFT_1077at 1116.325 kb on - strand, within B158DRAFT_1077at 1116.387 kb on - strand, within B158DRAFT_1077at 1116.420 kb on + strand, within B158DRAFT_1077at 1116.420 kb on + strand, within B158DRAFT_1077at 1116.426 kb on + strand, within B158DRAFT_1077at 1116.428 kb on - strand, within B158DRAFT_1077at 1116.428 kb on - strand, within B158DRAFT_1077at 1116.429 kb on - strand, within B158DRAFT_1077at 1116.478 kb on - strand, within B158DRAFT_1077at 1116.509 kb on + strand, within B158DRAFT_1077at 1116.509 kb on + strand, within B158DRAFT_1077at 1116.517 kb on - strand, within B158DRAFT_1077at 1116.517 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.556 kb on - strand, within B158DRAFT_1077at 1116.556 kb on - strand, within B158DRAFT_1077at 1116.584 kb on + strand, within B158DRAFT_1077at 1116.639 kb on + strandat 1116.639 kb on + strandat 1116.647 kb on - strandat 1116.660 kb on + strandat 1116.660 kb on + strandat 1116.665 kb on + strandat 1116.798 kb on + strand, within B158DRAFT_1078at 1116.899 kb on + strand, within B158DRAFT_1078at 1116.935 kb on + strand, within B158DRAFT_1078at 1117.033 kb on + strand, within B158DRAFT_1078at 1117.033 kb on + strand, within B158DRAFT_1078at 1117.041 kb on - strand, within B158DRAFT_1078at 1117.088 kb on + strandat 1117.111 kb on + strandat 1117.118 kb on + strandat 1117.149 kb on - strandat 1117.157 kb on + strandat 1117.179 kb on - strandat 1117.184 kb on - strandat 1117.219 kb on + strandat 1117.219 kb on + strandat 1117.227 kb on - strandat 1117.227 kb on - strandat 1117.258 kb on + strandat 1117.258 kb on + strandat 1117.277 kb on - strandat 1117.296 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,115,730 - -0.9
1,115,735 - -0.3
1,115,751 + +1.0
1,115,764 + +0.7
1,115,764 + +0.1
1,115,764 + -0.4
1,115,772 + +0.1
1,115,772 - -0.0
1,115,772 - -0.6
1,115,785 + -0.4
1,115,845 - -0.2
1,115,845 - -0.0
1,115,870 - +0.3
1,115,879 - +1.3
1,115,880 - +0.7
1,115,899 - B158DRAFT_1077 0.10 -0.3
1,115,984 - B158DRAFT_1077 0.19 -0.4
1,116,043 + B158DRAFT_1077 0.26 +0.2
1,116,076 + B158DRAFT_1077 0.29 +0.3
1,116,076 + B158DRAFT_1077 0.29 -1.4
1,116,076 + B158DRAFT_1077 0.29 -0.0
1,116,079 - B158DRAFT_1077 0.30 -0.2
1,116,084 - B158DRAFT_1077 0.30 -0.7
1,116,084 - B158DRAFT_1077 0.30 -0.8
1,116,084 - B158DRAFT_1077 0.30 -1.1
1,116,084 - B158DRAFT_1077 0.30 -0.6
1,116,084 - B158DRAFT_1077 0.30 -0.6
1,116,184 + B158DRAFT_1077 0.41 -0.3
1,116,192 - B158DRAFT_1077 0.42 -0.5
1,116,199 - B158DRAFT_1077 0.43 -0.7
1,116,199 - B158DRAFT_1077 0.43 -0.8
1,116,199 - B158DRAFT_1077 0.43 -1.5
1,116,201 + B158DRAFT_1077 0.43 -0.0
1,116,317 + B158DRAFT_1077 0.56 +0.1
1,116,325 - B158DRAFT_1077 0.57 +0.2
1,116,387 - B158DRAFT_1077 0.64 -1.2
1,116,420 + B158DRAFT_1077 0.67 +0.1
1,116,420 + B158DRAFT_1077 0.67 -2.7
1,116,426 + B158DRAFT_1077 0.68 -0.3
1,116,428 - B158DRAFT_1077 0.68 +0.7
1,116,428 - B158DRAFT_1077 0.68 +0.3
1,116,429 - B158DRAFT_1077 0.68 +0.3
1,116,478 - B158DRAFT_1077 0.74 -0.2
1,116,509 + B158DRAFT_1077 0.77 -0.5
1,116,509 + B158DRAFT_1077 0.77 -1.2
1,116,517 - B158DRAFT_1077 0.78 -0.8
1,116,517 - B158DRAFT_1077 0.78 -0.4
1,116,546 - B158DRAFT_1077 0.81 -0.4
1,116,546 - B158DRAFT_1077 0.81 -1.2
1,116,546 - B158DRAFT_1077 0.81 -1.0
1,116,556 - B158DRAFT_1077 0.82 -1.1
1,116,556 - B158DRAFT_1077 0.82 +0.5
1,116,584 + B158DRAFT_1077 0.85 +2.7
1,116,639 + +0.2
1,116,639 + +0.8
1,116,647 - -0.1
1,116,660 + +0.6
1,116,660 + -1.1
1,116,665 + -1.7
1,116,798 + B158DRAFT_1078 0.19 -0.1
1,116,899 + B158DRAFT_1078 0.45 -0.2
1,116,935 + B158DRAFT_1078 0.54 -1.8
1,117,033 + B158DRAFT_1078 0.79 -1.1
1,117,033 + B158DRAFT_1078 0.79 +0.7
1,117,041 - B158DRAFT_1078 0.81 -0.2
1,117,088 + -0.8
1,117,111 + +0.3
1,117,118 + -0.3
1,117,149 - +0.5
1,117,157 + -0.2
1,117,179 - -0.3
1,117,184 - -0.4
1,117,219 + -1.3
1,117,219 + -0.2
1,117,227 - +0.6
1,117,227 - -0.4
1,117,258 + +0.0
1,117,258 + -0.5
1,117,277 - +0.0
1,117,296 + +0.6

Or see this region's nucleotide sequence