Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0958

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0956 and B158DRAFT_0957 are separated by 24 nucleotidesB158DRAFT_0957 and B158DRAFT_0958 are separated by 11 nucleotidesB158DRAFT_0958 and B158DRAFT_0959 are separated by 575 nucleotides B158DRAFT_0956: B158DRAFT_0956 - dissimilatory nitrite reductase (NO-forming), copper type apoprotein, at 986,724 to 988,136 _0956 B158DRAFT_0957: B158DRAFT_0957 - Uncharacterized conserved protein, at 988,161 to 988,973 _0957 B158DRAFT_0958: B158DRAFT_0958 - Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems, at 988,985 to 989,557 _0958 B158DRAFT_0959: B158DRAFT_0959 - hypothetical protein, at 990,133 to 990,801 _0959 Position (kb) 988 989 990Strain fitness (log2 ratio) -2 -1 0 1at 988.000 kb on + strandat 988.008 kb on - strandat 988.016 kb on + strandat 988.024 kb on - strandat 988.261 kb on - strand, within B158DRAFT_0957at 988.267 kb on + strand, within B158DRAFT_0957at 988.324 kb on - strand, within B158DRAFT_0957at 988.324 kb on - strand, within B158DRAFT_0957at 988.324 kb on - strand, within B158DRAFT_0957at 988.353 kb on + strand, within B158DRAFT_0957at 988.460 kb on + strand, within B158DRAFT_0957at 988.460 kb on + strand, within B158DRAFT_0957at 988.468 kb on - strand, within B158DRAFT_0957at 988.553 kb on + strand, within B158DRAFT_0957at 988.553 kb on + strand, within B158DRAFT_0957at 988.560 kb on + strand, within B158DRAFT_0957at 988.560 kb on + strand, within B158DRAFT_0957at 988.561 kb on - strand, within B158DRAFT_0957at 988.561 kb on - strand, within B158DRAFT_0957at 988.568 kb on - strand, within B158DRAFT_0957at 988.568 kb on - strand, within B158DRAFT_0957at 988.587 kb on - strand, within B158DRAFT_0957at 988.664 kb on - strand, within B158DRAFT_0957at 988.723 kb on - strand, within B158DRAFT_0957at 988.789 kb on - strand, within B158DRAFT_0957at 988.789 kb on - strand, within B158DRAFT_0957at 988.870 kb on + strand, within B158DRAFT_0957at 988.955 kb on - strandat 988.955 kb on - strandat 989.017 kb on + strandat 989.142 kb on - strand, within B158DRAFT_0958at 989.156 kb on + strand, within B158DRAFT_0958at 989.252 kb on + strand, within B158DRAFT_0958at 989.260 kb on - strand, within B158DRAFT_0958at 989.265 kb on - strand, within B158DRAFT_0958at 989.269 kb on + strand, within B158DRAFT_0958at 989.281 kb on - strand, within B158DRAFT_0958at 989.291 kb on - strand, within B158DRAFT_0958at 989.437 kb on + strand, within B158DRAFT_0958at 989.637 kb on + strandat 989.637 kb on + strandat 989.637 kb on + strandat 989.637 kb on + strandat 989.637 kb on + strandat 989.645 kb on - strandat 989.645 kb on - strandat 989.645 kb on - strandat 989.645 kb on - strandat 989.657 kb on - strandat 989.675 kb on - strandat 989.701 kb on + strandat 989.701 kb on + strandat 989.706 kb on + strandat 989.715 kb on + strandat 989.723 kb on - strandat 989.994 kb on - strandat 990.027 kb on + strandat 990.258 kb on + strand, within B158DRAFT_0959at 990.322 kb on - strand, within B158DRAFT_0959at 990.356 kb on + strand, within B158DRAFT_0959at 990.502 kb on + strand, within B158DRAFT_0959

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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988,000 + +0.1
988,008 - -0.4
988,016 + -0.3
988,024 - -1.0
988,261 - B158DRAFT_0957 0.12 +1.5
988,267 + B158DRAFT_0957 0.13 +0.4
988,324 - B158DRAFT_0957 0.20 +0.5
988,324 - B158DRAFT_0957 0.20 -0.1
988,324 - B158DRAFT_0957 0.20 -0.2
988,353 + B158DRAFT_0957 0.24 -0.0
988,460 + B158DRAFT_0957 0.37 -0.2
988,460 + B158DRAFT_0957 0.37 -1.1
988,468 - B158DRAFT_0957 0.38 -0.7
988,553 + B158DRAFT_0957 0.48 +0.0
988,553 + B158DRAFT_0957 0.48 -0.7
988,560 + B158DRAFT_0957 0.49 +0.3
988,560 + B158DRAFT_0957 0.49 +0.3
988,561 - B158DRAFT_0957 0.49 -1.4
988,561 - B158DRAFT_0957 0.49 +0.1
988,568 - B158DRAFT_0957 0.50 -0.9
988,568 - B158DRAFT_0957 0.50 -0.2
988,587 - B158DRAFT_0957 0.52 -0.5
988,664 - B158DRAFT_0957 0.62 +1.1
988,723 - B158DRAFT_0957 0.69 +0.4
988,789 - B158DRAFT_0957 0.77 +0.2
988,789 - B158DRAFT_0957 0.77 -0.1
988,870 + B158DRAFT_0957 0.87 +0.4
988,955 - -0.9
988,955 - +0.6
989,017 + -0.0
989,142 - B158DRAFT_0958 0.27 -0.2
989,156 + B158DRAFT_0958 0.30 -0.5
989,252 + B158DRAFT_0958 0.47 -1.4
989,260 - B158DRAFT_0958 0.48 +1.1
989,265 - B158DRAFT_0958 0.49 +0.2
989,269 + B158DRAFT_0958 0.50 +1.0
989,281 - B158DRAFT_0958 0.52 +1.1
989,291 - B158DRAFT_0958 0.53 -0.4
989,437 + B158DRAFT_0958 0.79 -0.8
989,637 + -0.5
989,637 + -0.1
989,637 + -0.9
989,637 + -2.0
989,637 + +0.1
989,645 - -0.2
989,645 - -0.6
989,645 - +0.3
989,645 - +0.3
989,657 - -0.0
989,675 - -0.1
989,701 + -1.1
989,701 + +0.4
989,706 + -1.4
989,715 + -0.5
989,723 - +0.8
989,994 - -1.6
990,027 + -0.4
990,258 + B158DRAFT_0959 0.19 -0.2
990,322 - B158DRAFT_0959 0.28 -2.3
990,356 + B158DRAFT_0959 0.33 -0.4
990,502 + B158DRAFT_0959 0.55 -0.4

Or see this region's nucleotide sequence