Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0444

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0442 and B158DRAFT_0443 are separated by 130 nucleotidesB158DRAFT_0443 and B158DRAFT_0444 are separated by 37 nucleotidesB158DRAFT_0444 and B158DRAFT_0445 are separated by 142 nucleotidesB158DRAFT_0445 and B158DRAFT_0446 are separated by 29 nucleotides B158DRAFT_0442: B158DRAFT_0442 - signal recognition particle-docking protein FtsY, at 443,904 to 445,148 _0442 B158DRAFT_0443: B158DRAFT_0443 - 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52), at 445,279 to 445,890 _0443 B158DRAFT_0444: B158DRAFT_0444 - hypothetical protein, at 445,928 to 446,884 _0444 B158DRAFT_0445: B158DRAFT_0445 - Parvulin-like peptidyl-prolyl isomerase, at 447,027 to 447,314 _0445 B158DRAFT_0446: B158DRAFT_0446 - Adenine-specific DNA methylase, at 447,344 to 448,060 _0446 Position (kb) 445 446 447Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 445.261 kb on + strandat 445.269 kb on - strandat 445.418 kb on + strand, within B158DRAFT_0443at 445.421 kb on - strand, within B158DRAFT_0443at 445.421 kb on - strand, within B158DRAFT_0443at 445.426 kb on - strand, within B158DRAFT_0443at 445.426 kb on - strand, within B158DRAFT_0443at 445.447 kb on + strand, within B158DRAFT_0443at 445.447 kb on + strand, within B158DRAFT_0443at 445.455 kb on - strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.487 kb on + strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.495 kb on - strand, within B158DRAFT_0443at 445.551 kb on + strand, within B158DRAFT_0443at 445.611 kb on + strand, within B158DRAFT_0443at 445.611 kb on + strand, within B158DRAFT_0443at 445.619 kb on - strand, within B158DRAFT_0443at 445.619 kb on - strand, within B158DRAFT_0443at 445.621 kb on + strand, within B158DRAFT_0443at 445.656 kb on - strand, within B158DRAFT_0443at 445.698 kb on + strand, within B158DRAFT_0443at 445.761 kb on + strand, within B158DRAFT_0443at 445.761 kb on + strand, within B158DRAFT_0443at 445.769 kb on - strand, within B158DRAFT_0443at 445.769 kb on - strand, within B158DRAFT_0443at 445.769 kb on - strand, within B158DRAFT_0443at 445.769 kb on - strand, within B158DRAFT_0443at 445.790 kb on + strand, within B158DRAFT_0443at 445.790 kb on + strand, within B158DRAFT_0443at 445.798 kb on - strand, within B158DRAFT_0443at 445.802 kb on + strand, within B158DRAFT_0443at 445.824 kb on + strand, within B158DRAFT_0443at 445.824 kb on + strand, within B158DRAFT_0443at 445.827 kb on - strand, within B158DRAFT_0443at 445.832 kb on - strandat 445.837 kb on - strandat 445.899 kb on - strandat 446.060 kb on + strand, within B158DRAFT_0444at 446.068 kb on - strand, within B158DRAFT_0444at 446.184 kb on - strand, within B158DRAFT_0444at 446.202 kb on - strand, within B158DRAFT_0444at 446.319 kb on + strand, within B158DRAFT_0444at 446.327 kb on - strand, within B158DRAFT_0444at 446.521 kb on + strand, within B158DRAFT_0444at 446.523 kb on + strand, within B158DRAFT_0444at 446.529 kb on - strand, within B158DRAFT_0444at 446.594 kb on - strand, within B158DRAFT_0444at 446.656 kb on - strand, within B158DRAFT_0444at 446.688 kb on + strand, within B158DRAFT_0444at 446.722 kb on + strand, within B158DRAFT_0444at 446.733 kb on + strand, within B158DRAFT_0444at 446.763 kb on - strand, within B158DRAFT_0444at 446.776 kb on - strand, within B158DRAFT_0444at 446.824 kb on - strandat 447.046 kb on + strandat 447.072 kb on + strand, within B158DRAFT_0445at 447.102 kb on - strand, within B158DRAFT_0445at 447.135 kb on + strand, within B158DRAFT_0445at 447.135 kb on + strand, within B158DRAFT_0445at 447.136 kb on + strand, within B158DRAFT_0445at 447.143 kb on - strand, within B158DRAFT_0445at 447.143 kb on - strand, within B158DRAFT_0445at 447.277 kb on + strand, within B158DRAFT_0445at 447.291 kb on + strandat 447.299 kb on - strandat 447.299 kb on - strandat 447.330 kb on - strandat 447.381 kb on - strandat 447.447 kb on + strand, within B158DRAFT_0446at 447.476 kb on + strand, within B158DRAFT_0446at 447.484 kb on - strand, within B158DRAFT_0446at 447.484 kb on - strand, within B158DRAFT_0446at 447.511 kb on + strand, within B158DRAFT_0446at 447.628 kb on + strand, within B158DRAFT_0446at 447.646 kb on - strand, within B158DRAFT_0446at 447.688 kb on + strand, within B158DRAFT_0446at 447.693 kb on + strand, within B158DRAFT_0446at 447.738 kb on + strand, within B158DRAFT_0446at 447.764 kb on - strand, within B158DRAFT_0446at 447.793 kb on + strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.809 kb on + strand, within B158DRAFT_0446at 447.817 kb on - strand, within B158DRAFT_0446

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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445,261 + -0.1
445,269 - -0.1
445,418 + B158DRAFT_0443 0.23 -0.6
445,421 - B158DRAFT_0443 0.23 +0.8
445,421 - B158DRAFT_0443 0.23 -0.5
445,426 - B158DRAFT_0443 0.24 -0.5
445,426 - B158DRAFT_0443 0.24 -0.1
445,447 + B158DRAFT_0443 0.27 -2.2
445,447 + B158DRAFT_0443 0.27 +0.2
445,455 - B158DRAFT_0443 0.29 +0.4
445,487 + B158DRAFT_0443 0.34 -0.1
445,487 + B158DRAFT_0443 0.34 -1.2
445,487 + B158DRAFT_0443 0.34 -0.1
445,487 + B158DRAFT_0443 0.34 +1.0
445,487 + B158DRAFT_0443 0.34 -1.0
445,487 + B158DRAFT_0443 0.34 +2.5
445,487 + B158DRAFT_0443 0.34 -0.1
445,487 + B158DRAFT_0443 0.34 -0.1
445,487 + B158DRAFT_0443 0.34 -1.0
445,495 - B158DRAFT_0443 0.35 -0.3
445,495 - B158DRAFT_0443 0.35 -2.3
445,495 - B158DRAFT_0443 0.35 +0.3
445,495 - B158DRAFT_0443 0.35 -0.6
445,495 - B158DRAFT_0443 0.35 -0.8
445,495 - B158DRAFT_0443 0.35 -0.4
445,495 - B158DRAFT_0443 0.35 +1.0
445,495 - B158DRAFT_0443 0.35 +0.4
445,551 + B158DRAFT_0443 0.44 -0.1
445,611 + B158DRAFT_0443 0.54 -0.7
445,611 + B158DRAFT_0443 0.54 -0.5
445,619 - B158DRAFT_0443 0.56 +0.0
445,619 - B158DRAFT_0443 0.56 -1.0
445,621 + B158DRAFT_0443 0.56 +0.5
445,656 - B158DRAFT_0443 0.62 +0.3
445,698 + B158DRAFT_0443 0.68 -0.5
445,761 + B158DRAFT_0443 0.79 +0.0
445,761 + B158DRAFT_0443 0.79 -0.1
445,769 - B158DRAFT_0443 0.80 -0.9
445,769 - B158DRAFT_0443 0.80 -1.6
445,769 - B158DRAFT_0443 0.80 -0.1
445,769 - B158DRAFT_0443 0.80 -0.2
445,790 + B158DRAFT_0443 0.83 -0.7
445,790 + B158DRAFT_0443 0.83 +0.3
445,798 - B158DRAFT_0443 0.85 -0.6
445,802 + B158DRAFT_0443 0.85 +0.1
445,824 + B158DRAFT_0443 0.89 +0.6
445,824 + B158DRAFT_0443 0.89 +2.3
445,827 - B158DRAFT_0443 0.90 -1.0
445,832 - -0.1
445,837 - -0.2
445,899 - -0.0
446,060 + B158DRAFT_0444 0.14 -0.8
446,068 - B158DRAFT_0444 0.15 -2.0
446,184 - B158DRAFT_0444 0.27 +0.2
446,202 - B158DRAFT_0444 0.29 -0.3
446,319 + B158DRAFT_0444 0.41 +0.6
446,327 - B158DRAFT_0444 0.42 -0.1
446,521 + B158DRAFT_0444 0.62 -0.2
446,523 + B158DRAFT_0444 0.62 +0.4
446,529 - B158DRAFT_0444 0.63 +1.9
446,594 - B158DRAFT_0444 0.70 +0.1
446,656 - B158DRAFT_0444 0.76 +0.4
446,688 + B158DRAFT_0444 0.79 +0.2
446,722 + B158DRAFT_0444 0.83 +0.6
446,733 + B158DRAFT_0444 0.84 -0.1
446,763 - B158DRAFT_0444 0.87 -0.1
446,776 - B158DRAFT_0444 0.89 +0.1
446,824 - -1.2
447,046 + +0.8
447,072 + B158DRAFT_0445 0.16 +0.9
447,102 - B158DRAFT_0445 0.26 +0.4
447,135 + B158DRAFT_0445 0.38 -0.2
447,135 + B158DRAFT_0445 0.38 -0.2
447,136 + B158DRAFT_0445 0.38 -0.6
447,143 - B158DRAFT_0445 0.40 +0.4
447,143 - B158DRAFT_0445 0.40 -0.3
447,277 + B158DRAFT_0445 0.87 +0.8
447,291 + +0.0
447,299 - -0.4
447,299 - -0.1
447,330 - -1.1
447,381 - -2.8
447,447 + B158DRAFT_0446 0.14 -0.2
447,476 + B158DRAFT_0446 0.18 -0.5
447,484 - B158DRAFT_0446 0.20 -1.1
447,484 - B158DRAFT_0446 0.20 -0.5
447,511 + B158DRAFT_0446 0.23 -0.2
447,628 + B158DRAFT_0446 0.40 +0.3
447,646 - B158DRAFT_0446 0.42 -0.6
447,688 + B158DRAFT_0446 0.48 +0.1
447,693 + B158DRAFT_0446 0.49 -0.6
447,738 + B158DRAFT_0446 0.55 +1.0
447,764 - B158DRAFT_0446 0.59 +1.3
447,793 + B158DRAFT_0446 0.63 +0.2
447,801 - B158DRAFT_0446 0.64 +0.4
447,801 - B158DRAFT_0446 0.64 +0.9
447,801 - B158DRAFT_0446 0.64 -1.3
447,801 - B158DRAFT_0446 0.64 +0.9
447,801 - B158DRAFT_0446 0.64 -0.5
447,801 - B158DRAFT_0446 0.64 -0.9
447,801 - B158DRAFT_0446 0.64 -0.1
447,801 - B158DRAFT_0446 0.64 +0.3
447,801 - B158DRAFT_0446 0.64 +0.3
447,801 - B158DRAFT_0446 0.64 -0.0
447,809 + B158DRAFT_0446 0.65 +0.1
447,817 - B158DRAFT_0446 0.66 -0.1

Or see this region's nucleotide sequence