Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0405

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0403 and B158DRAFT_0404 are separated by 9 nucleotidesB158DRAFT_0404 and B158DRAFT_0405 are separated by 21 nucleotidesB158DRAFT_0405 and B158DRAFT_0406 are separated by 15 nucleotidesB158DRAFT_0406 and B158DRAFT_0407 are separated by 54 nucleotides B158DRAFT_0403: B158DRAFT_0403 - Putative translation factor (SUA5), at 408,981 to 409,544 _0403 B158DRAFT_0404: B158DRAFT_0404 - coproporphyrinogen oxidase (EC 1.3.3.3), at 409,554 to 410,480 _0404 B158DRAFT_0405: B158DRAFT_0405 - Delta-aminolevulinic acid dehydratase, at 410,502 to 411,503 _0405 B158DRAFT_0406: B158DRAFT_0406 - Predicted permeases, at 411,519 to 412,406 _0406 B158DRAFT_0407: B158DRAFT_0407 - hypothetical protein, at 412,461 to 413,180 _0407 Position (kb) 410 411 412Strain fitness (log2 ratio) -3 -2 -1 0 1at 409.522 kb on + strandat 409.545 kb on + strandat 411.511 kb on + strandat 411.562 kb on - strandat 411.675 kb on - strand, within B158DRAFT_0406at 411.689 kb on - strand, within B158DRAFT_0406at 411.699 kb on - strand, within B158DRAFT_0406at 411.699 kb on - strand, within B158DRAFT_0406at 411.775 kb on - strand, within B158DRAFT_0406at 411.781 kb on + strand, within B158DRAFT_0406at 411.789 kb on - strand, within B158DRAFT_0406at 411.789 kb on - strand, within B158DRAFT_0406at 411.817 kb on + strand, within B158DRAFT_0406at 411.827 kb on + strand, within B158DRAFT_0406at 411.840 kb on + strand, within B158DRAFT_0406at 411.840 kb on + strand, within B158DRAFT_0406at 411.843 kb on - strand, within B158DRAFT_0406at 411.845 kb on + strand, within B158DRAFT_0406at 411.845 kb on + strand, within B158DRAFT_0406at 411.845 kb on + strand, within B158DRAFT_0406at 411.853 kb on - strand, within B158DRAFT_0406at 411.883 kb on + strand, within B158DRAFT_0406at 411.883 kb on + strand, within B158DRAFT_0406at 411.883 kb on + strand, within B158DRAFT_0406at 411.883 kb on + strand, within B158DRAFT_0406at 411.883 kb on + strand, within B158DRAFT_0406at 411.883 kb on + strand, within B158DRAFT_0406at 411.891 kb on - strand, within B158DRAFT_0406at 411.891 kb on - strand, within B158DRAFT_0406at 411.891 kb on - strand, within B158DRAFT_0406at 411.901 kb on - strand, within B158DRAFT_0406at 411.901 kb on - strand, within B158DRAFT_0406at 411.922 kb on + strand, within B158DRAFT_0406at 411.923 kb on + strand, within B158DRAFT_0406at 411.923 kb on + strand, within B158DRAFT_0406at 411.923 kb on + strand, within B158DRAFT_0406at 411.928 kb on + strand, within B158DRAFT_0406at 411.931 kb on - strand, within B158DRAFT_0406at 411.931 kb on - strand, within B158DRAFT_0406at 411.931 kb on - strand, within B158DRAFT_0406at 411.931 kb on - strand, within B158DRAFT_0406at 411.936 kb on - strand, within B158DRAFT_0406at 411.936 kb on - strand, within B158DRAFT_0406at 411.936 kb on - strand, within B158DRAFT_0406at 411.952 kb on - strand, within B158DRAFT_0406at 411.955 kb on + strand, within B158DRAFT_0406at 411.955 kb on + strand, within B158DRAFT_0406at 411.955 kb on + strand, within B158DRAFT_0406at 411.955 kb on + strand, within B158DRAFT_0406at 411.963 kb on - strand, within B158DRAFT_0406at 411.963 kb on - strand, within B158DRAFT_0406at 411.963 kb on - strand, within B158DRAFT_0406at 411.963 kb on - strand, within B158DRAFT_0406at 411.963 kb on - strand, within B158DRAFT_0406at 411.963 kb on - strand, within B158DRAFT_0406at 411.963 kb on - strand, within B158DRAFT_0406at 411.976 kb on - strand, within B158DRAFT_0406at 411.982 kb on + strand, within B158DRAFT_0406at 411.990 kb on - strand, within B158DRAFT_0406at 412.000 kb on - strand, within B158DRAFT_0406at 412.038 kb on + strand, within B158DRAFT_0406at 412.040 kb on + strand, within B158DRAFT_0406at 412.091 kb on + strand, within B158DRAFT_0406at 412.121 kb on - strand, within B158DRAFT_0406at 412.163 kb on - strand, within B158DRAFT_0406at 412.178 kb on + strand, within B158DRAFT_0406at 412.197 kb on + strand, within B158DRAFT_0406at 412.204 kb on + strand, within B158DRAFT_0406at 412.204 kb on - strand, within B158DRAFT_0406at 412.212 kb on - strand, within B158DRAFT_0406at 412.212 kb on - strand, within B158DRAFT_0406at 412.212 kb on - strand, within B158DRAFT_0406at 412.212 kb on - strand, within B158DRAFT_0406at 412.212 kb on - strand, within B158DRAFT_0406at 412.216 kb on + strand, within B158DRAFT_0406at 412.216 kb on + strand, within B158DRAFT_0406at 412.226 kb on + strand, within B158DRAFT_0406at 412.226 kb on + strand, within B158DRAFT_0406at 412.401 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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409,522 + -1.0
409,545 + -0.2
411,511 + -0.9
411,562 - +0.4
411,675 - B158DRAFT_0406 0.18 -3.1
411,689 - B158DRAFT_0406 0.19 -0.5
411,699 - B158DRAFT_0406 0.20 -0.4
411,699 - B158DRAFT_0406 0.20 -0.8
411,775 - B158DRAFT_0406 0.29 -0.2
411,781 + B158DRAFT_0406 0.30 +0.5
411,789 - B158DRAFT_0406 0.30 -0.7
411,789 - B158DRAFT_0406 0.30 +0.9
411,817 + B158DRAFT_0406 0.34 -0.8
411,827 + B158DRAFT_0406 0.35 -1.4
411,840 + B158DRAFT_0406 0.36 -2.0
411,840 + B158DRAFT_0406 0.36 -0.1
411,843 - B158DRAFT_0406 0.36 +0.5
411,845 + B158DRAFT_0406 0.37 -0.4
411,845 + B158DRAFT_0406 0.37 -0.8
411,845 + B158DRAFT_0406 0.37 -0.2
411,853 - B158DRAFT_0406 0.38 -1.7
411,883 + B158DRAFT_0406 0.41 -0.2
411,883 + B158DRAFT_0406 0.41 +0.1
411,883 + B158DRAFT_0406 0.41 -1.8
411,883 + B158DRAFT_0406 0.41 -0.6
411,883 + B158DRAFT_0406 0.41 -0.3
411,883 + B158DRAFT_0406 0.41 -2.3
411,891 - B158DRAFT_0406 0.42 -0.8
411,891 - B158DRAFT_0406 0.42 -1.1
411,891 - B158DRAFT_0406 0.42 -0.7
411,901 - B158DRAFT_0406 0.43 -0.7
411,901 - B158DRAFT_0406 0.43 +0.1
411,922 + B158DRAFT_0406 0.45 +0.7
411,923 + B158DRAFT_0406 0.45 -2.0
411,923 + B158DRAFT_0406 0.45 -0.8
411,923 + B158DRAFT_0406 0.45 -0.7
411,928 + B158DRAFT_0406 0.46 +0.4
411,931 - B158DRAFT_0406 0.46 -0.5
411,931 - B158DRAFT_0406 0.46 -2.1
411,931 - B158DRAFT_0406 0.46 -0.2
411,931 - B158DRAFT_0406 0.46 +1.2
411,936 - B158DRAFT_0406 0.47 +0.7
411,936 - B158DRAFT_0406 0.47 -0.8
411,936 - B158DRAFT_0406 0.47 +0.5
411,952 - B158DRAFT_0406 0.49 -0.2
411,955 + B158DRAFT_0406 0.49 +0.2
411,955 + B158DRAFT_0406 0.49 +0.3
411,955 + B158DRAFT_0406 0.49 +0.5
411,955 + B158DRAFT_0406 0.49 -1.3
411,963 - B158DRAFT_0406 0.50 -0.5
411,963 - B158DRAFT_0406 0.50 -0.1
411,963 - B158DRAFT_0406 0.50 -2.2
411,963 - B158DRAFT_0406 0.50 -0.2
411,963 - B158DRAFT_0406 0.50 -0.5
411,963 - B158DRAFT_0406 0.50 +1.6
411,963 - B158DRAFT_0406 0.50 +1.2
411,976 - B158DRAFT_0406 0.51 +0.8
411,982 + B158DRAFT_0406 0.52 -0.3
411,990 - B158DRAFT_0406 0.53 +1.4
412,000 - B158DRAFT_0406 0.54 -0.5
412,038 + B158DRAFT_0406 0.58 +0.6
412,040 + B158DRAFT_0406 0.59 -0.4
412,091 + B158DRAFT_0406 0.64 +0.0
412,121 - B158DRAFT_0406 0.68 -0.2
412,163 - B158DRAFT_0406 0.73 -0.3
412,178 + B158DRAFT_0406 0.74 +1.0
412,197 + B158DRAFT_0406 0.76 -0.3
412,204 + B158DRAFT_0406 0.77 +0.4
412,204 - B158DRAFT_0406 0.77 -0.4
412,212 - B158DRAFT_0406 0.78 -0.2
412,212 - B158DRAFT_0406 0.78 -0.5
412,212 - B158DRAFT_0406 0.78 +0.5
412,212 - B158DRAFT_0406 0.78 +0.8
412,212 - B158DRAFT_0406 0.78 -0.8
412,216 + B158DRAFT_0406 0.78 +0.1
412,216 + B158DRAFT_0406 0.78 -2.5
412,226 + B158DRAFT_0406 0.80 +0.8
412,226 + B158DRAFT_0406 0.80 -0.3
412,401 + +0.3

Or see this region's nucleotide sequence