Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0403

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0402 and B158DRAFT_0403 are separated by 199 nucleotidesB158DRAFT_0403 and B158DRAFT_0404 are separated by 9 nucleotidesB158DRAFT_0404 and B158DRAFT_0405 are separated by 21 nucleotides B158DRAFT_0402: B158DRAFT_0402 - Thiol-disulfide isomerase and thioredoxins, at 407,939 to 408,781 _0402 B158DRAFT_0403: B158DRAFT_0403 - Putative translation factor (SUA5), at 408,981 to 409,544 _0403 B158DRAFT_0404: B158DRAFT_0404 - coproporphyrinogen oxidase (EC 1.3.3.3), at 409,554 to 410,480 _0404 B158DRAFT_0405: B158DRAFT_0405 - Delta-aminolevulinic acid dehydratase, at 410,502 to 411,503 _0405 Position (kb) 408 409 410Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 408.012 kb on + strandat 408.012 kb on + strandat 408.106 kb on + strand, within B158DRAFT_0402at 408.106 kb on + strand, within B158DRAFT_0402at 408.119 kb on + strand, within B158DRAFT_0402at 408.119 kb on + strand, within B158DRAFT_0402at 408.119 kb on + strand, within B158DRAFT_0402at 408.127 kb on - strand, within B158DRAFT_0402at 408.127 kb on - strand, within B158DRAFT_0402at 408.127 kb on - strand, within B158DRAFT_0402at 408.132 kb on - strand, within B158DRAFT_0402at 408.132 kb on - strand, within B158DRAFT_0402at 408.209 kb on + strand, within B158DRAFT_0402at 408.219 kb on + strand, within B158DRAFT_0402at 408.260 kb on + strand, within B158DRAFT_0402at 408.268 kb on - strand, within B158DRAFT_0402at 408.289 kb on - strand, within B158DRAFT_0402at 408.299 kb on - strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.336 kb on - strand, within B158DRAFT_0402at 408.336 kb on - strand, within B158DRAFT_0402at 408.336 kb on - strand, within B158DRAFT_0402at 408.338 kb on + strand, within B158DRAFT_0402at 408.338 kb on + strand, within B158DRAFT_0402at 408.346 kb on - strand, within B158DRAFT_0402at 408.381 kb on - strand, within B158DRAFT_0402at 408.399 kb on + strand, within B158DRAFT_0402at 408.404 kb on + strand, within B158DRAFT_0402at 408.407 kb on - strand, within B158DRAFT_0402at 408.414 kb on + strand, within B158DRAFT_0402at 408.422 kb on - strand, within B158DRAFT_0402at 408.448 kb on - strand, within B158DRAFT_0402at 408.530 kb on + strand, within B158DRAFT_0402at 408.537 kb on + strand, within B158DRAFT_0402at 408.583 kb on + strand, within B158DRAFT_0402at 408.589 kb on + strand, within B158DRAFT_0402at 408.591 kb on - strand, within B158DRAFT_0402at 408.597 kb on - strand, within B158DRAFT_0402at 408.611 kb on + strand, within B158DRAFT_0402at 408.611 kb on + strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.759 kb on + strandat 408.759 kb on + strandat 408.759 kb on + strandat 408.759 kb on + strandat 408.764 kb on + strandat 408.764 kb on + strandat 408.767 kb on - strandat 408.767 kb on - strandat 408.772 kb on - strandat 408.776 kb on + strandat 408.784 kb on - strandat 408.784 kb on - strandat 408.838 kb on - strandat 408.881 kb on + strandat 408.881 kb on + strandat 408.881 kb on + strandat 408.888 kb on + strandat 408.896 kb on - strandat 408.896 kb on - strandat 408.896 kb on - strandat 408.920 kb on + strandat 408.920 kb on + strandat 408.920 kb on + strandat 408.928 kb on - strandat 408.937 kb on - strandat 409.146 kb on + strand, within B158DRAFT_0403at 409.154 kb on - strand, within B158DRAFT_0403at 409.154 kb on - strand, within B158DRAFT_0403at 409.176 kb on - strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.182 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.204 kb on + strand, within B158DRAFT_0403at 409.212 kb on - strand, within B158DRAFT_0403at 409.212 kb on - strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.279 kb on + strand, within B158DRAFT_0403at 409.376 kb on + strand, within B158DRAFT_0403at 409.420 kb on + strand, within B158DRAFT_0403at 409.420 kb on + strand, within B158DRAFT_0403at 409.430 kb on + strand, within B158DRAFT_0403at 409.447 kb on + strand, within B158DRAFT_0403at 409.522 kb on + strandat 409.545 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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408,012 + -0.0
408,012 + +0.9
408,106 + B158DRAFT_0402 0.20 +0.2
408,106 + B158DRAFT_0402 0.20 +0.2
408,119 + B158DRAFT_0402 0.21 -0.2
408,119 + B158DRAFT_0402 0.21 -0.9
408,119 + B158DRAFT_0402 0.21 +0.3
408,127 - B158DRAFT_0402 0.22 +0.2
408,127 - B158DRAFT_0402 0.22 -0.3
408,127 - B158DRAFT_0402 0.22 -2.0
408,132 - B158DRAFT_0402 0.23 -0.9
408,132 - B158DRAFT_0402 0.23 +0.5
408,209 + B158DRAFT_0402 0.32 -0.3
408,219 + B158DRAFT_0402 0.33 -0.4
408,260 + B158DRAFT_0402 0.38 -1.9
408,268 - B158DRAFT_0402 0.39 +0.2
408,289 - B158DRAFT_0402 0.42 -0.3
408,299 - B158DRAFT_0402 0.43 -2.7
408,328 + B158DRAFT_0402 0.46 +0.0
408,328 + B158DRAFT_0402 0.46 -0.2
408,328 + B158DRAFT_0402 0.46 -0.4
408,328 + B158DRAFT_0402 0.46 -0.7
408,336 - B158DRAFT_0402 0.47 -0.2
408,336 - B158DRAFT_0402 0.47 +0.2
408,336 - B158DRAFT_0402 0.47 +0.4
408,338 + B158DRAFT_0402 0.47 +0.0
408,338 + B158DRAFT_0402 0.47 -0.3
408,346 - B158DRAFT_0402 0.48 +0.1
408,381 - B158DRAFT_0402 0.52 -0.9
408,399 + B158DRAFT_0402 0.55 -0.5
408,404 + B158DRAFT_0402 0.55 -2.2
408,407 - B158DRAFT_0402 0.56 -0.9
408,414 + B158DRAFT_0402 0.56 -2.6
408,422 - B158DRAFT_0402 0.57 -0.5
408,448 - B158DRAFT_0402 0.60 -0.3
408,530 + B158DRAFT_0402 0.70 +0.9
408,537 + B158DRAFT_0402 0.71 -0.3
408,583 + B158DRAFT_0402 0.76 +0.0
408,589 + B158DRAFT_0402 0.77 +0.8
408,591 - B158DRAFT_0402 0.77 -0.9
408,597 - B158DRAFT_0402 0.78 -0.7
408,611 + B158DRAFT_0402 0.80 -1.5
408,611 + B158DRAFT_0402 0.80 +0.2
408,619 - B158DRAFT_0402 0.81 -1.1
408,619 - B158DRAFT_0402 0.81 -0.3
408,619 - B158DRAFT_0402 0.81 -0.0
408,759 + +1.1
408,759 + -0.7
408,759 + -1.6
408,759 + +0.3
408,764 + -0.2
408,764 + +0.2
408,767 - +0.0
408,767 - -3.1
408,772 - -0.9
408,776 + +0.1
408,784 - -0.7
408,784 - -2.3
408,838 - +0.9
408,881 + +0.2
408,881 + -0.8
408,881 + +0.4
408,888 + -0.2
408,896 - +1.4
408,896 - +1.4
408,896 - +0.2
408,920 + +3.1
408,920 + -4.2
408,920 + -0.6
408,928 - +0.8
408,937 - -0.4
409,146 + B158DRAFT_0403 0.29 +0.1
409,154 - B158DRAFT_0403 0.31 +1.2
409,154 - B158DRAFT_0403 0.31 +1.1
409,176 - B158DRAFT_0403 0.35 +1.0
409,178 + B158DRAFT_0403 0.35 -0.8
409,178 + B158DRAFT_0403 0.35 +0.2
409,178 + B158DRAFT_0403 0.35 +0.1
409,178 + B158DRAFT_0403 0.35 -0.6
409,178 + B158DRAFT_0403 0.35 -0.6
409,178 + B158DRAFT_0403 0.35 -0.4
409,182 + B158DRAFT_0403 0.36 -1.5
409,183 + B158DRAFT_0403 0.36 -0.2
409,183 + B158DRAFT_0403 0.36 -0.2
409,183 + B158DRAFT_0403 0.36 -1.9
409,186 - B158DRAFT_0403 0.36 +1.3
409,186 - B158DRAFT_0403 0.36 +1.3
409,186 - B158DRAFT_0403 0.36 +1.2
409,204 + B158DRAFT_0403 0.40 -0.3
409,212 - B158DRAFT_0403 0.41 +2.3
409,212 - B158DRAFT_0403 0.41 +0.9
409,270 + B158DRAFT_0403 0.51 -0.4
409,270 + B158DRAFT_0403 0.51 -0.8
409,270 + B158DRAFT_0403 0.51 -0.3
409,270 + B158DRAFT_0403 0.51 +0.5
409,270 + B158DRAFT_0403 0.51 -0.2
409,279 + B158DRAFT_0403 0.53 -0.1
409,376 + B158DRAFT_0403 0.70 -0.3
409,420 + B158DRAFT_0403 0.78 +0.5
409,420 + B158DRAFT_0403 0.78 -0.8
409,430 + B158DRAFT_0403 0.80 -1.7
409,447 + B158DRAFT_0403 0.83 -0.7
409,522 + -1.0
409,545 + -0.2

Or see this region's nucleotide sequence