Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0148

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0146 and B158DRAFT_0147 are separated by 160 nucleotidesB158DRAFT_0147 and B158DRAFT_0148 are separated by 67 nucleotidesB158DRAFT_0148 and B158DRAFT_0149 are separated by 222 nucleotidesB158DRAFT_0149 and B158DRAFT_0150 overlap by 4 nucleotides B158DRAFT_0146: B158DRAFT_0146 - Co-chaperonin GroES (HSP10), at 145,231 to 145,521 _0146 B158DRAFT_0147: B158DRAFT_0147 - Protein affecting phage T7 exclusion by the F plasmid, at 145,682 to 146,206 _0147 B158DRAFT_0148: B158DRAFT_0148 - Uncharacterized protein involved in tolerance to divalent cations, at 146,274 to 146,627 _0148 B158DRAFT_0149: B158DRAFT_0149 - Thiol-disulfide isomerase and thioredoxins, at 146,850 to 147,386 _0149 B158DRAFT_0150: B158DRAFT_0150 - hypothetical protein, at 147,383 to 147,607 _0150 Position (kb) 146 147Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 145.630 kb on + strandat 145.632 kb on + strandat 145.745 kb on + strand, within B158DRAFT_0147at 145.784 kb on - strand, within B158DRAFT_0147at 145.818 kb on + strand, within B158DRAFT_0147at 145.826 kb on - strand, within B158DRAFT_0147at 145.860 kb on + strand, within B158DRAFT_0147at 145.880 kb on - strand, within B158DRAFT_0147at 145.900 kb on + strand, within B158DRAFT_0147at 145.900 kb on + strand, within B158DRAFT_0147at 145.937 kb on + strand, within B158DRAFT_0147at 146.003 kb on + strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.101 kb on + strand, within B158DRAFT_0147at 146.101 kb on + strand, within B158DRAFT_0147at 146.109 kb on - strand, within B158DRAFT_0147at 146.310 kb on + strand, within B158DRAFT_0148at 146.310 kb on + strand, within B158DRAFT_0148at 146.310 kb on + strand, within B158DRAFT_0148at 146.323 kb on - strand, within B158DRAFT_0148at 146.341 kb on - strand, within B158DRAFT_0148at 146.372 kb on + strand, within B158DRAFT_0148at 146.416 kb on - strand, within B158DRAFT_0148at 146.522 kb on + strand, within B158DRAFT_0148at 146.577 kb on - strand, within B158DRAFT_0148at 146.579 kb on + strand, within B158DRAFT_0148at 146.593 kb on + strandat 146.601 kb on - strandat 146.629 kb on - strandat 146.658 kb on + strandat 146.663 kb on + strandat 146.794 kb on + strandat 146.794 kb on + strandat 146.848 kb on - strandat 146.868 kb on - strandat 146.870 kb on + strandat 146.883 kb on - strandat 146.883 kb on - strandat 146.940 kb on + strand, within B158DRAFT_0149at 146.963 kb on + strand, within B158DRAFT_0149at 146.976 kb on - strand, within B158DRAFT_0149at 146.982 kb on - strand, within B158DRAFT_0149at 147.012 kb on + strand, within B158DRAFT_0149at 147.019 kb on + strand, within B158DRAFT_0149at 147.058 kb on - strand, within B158DRAFT_0149at 147.068 kb on + strand, within B158DRAFT_0149at 147.144 kb on + strand, within B158DRAFT_0149at 147.195 kb on + strand, within B158DRAFT_0149at 147.219 kb on + strand, within B158DRAFT_0149at 147.245 kb on + strand, within B158DRAFT_0149at 147.283 kb on + strand, within B158DRAFT_0149at 147.343 kb on + strandat 147.511 kb on + strand, within B158DRAFT_0150at 147.519 kb on - strand, within B158DRAFT_0150at 147.582 kb on - strand, within B158DRAFT_0150at 147.582 kb on - strand, within B158DRAFT_0150at 147.598 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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145,630 + +0.8
145,632 + -1.5
145,745 + B158DRAFT_0147 0.12 -2.4
145,784 - B158DRAFT_0147 0.19 +0.0
145,818 + B158DRAFT_0147 0.26 -1.9
145,826 - B158DRAFT_0147 0.27 -1.4
145,860 + B158DRAFT_0147 0.34 -1.5
145,880 - B158DRAFT_0147 0.38 -1.9
145,900 + B158DRAFT_0147 0.42 -0.9
145,900 + B158DRAFT_0147 0.42 -1.3
145,937 + B158DRAFT_0147 0.49 -1.0
146,003 + B158DRAFT_0147 0.61 -1.5
146,054 - B158DRAFT_0147 0.71 -1.9
146,054 - B158DRAFT_0147 0.71 -0.9
146,054 - B158DRAFT_0147 0.71 -1.2
146,101 + B158DRAFT_0147 0.80 -1.1
146,101 + B158DRAFT_0147 0.80 +0.7
146,109 - B158DRAFT_0147 0.81 -3.4
146,310 + B158DRAFT_0148 0.10 +0.3
146,310 + B158DRAFT_0148 0.10 +1.0
146,310 + B158DRAFT_0148 0.10 -0.8
146,323 - B158DRAFT_0148 0.14 -1.3
146,341 - B158DRAFT_0148 0.19 +0.3
146,372 + B158DRAFT_0148 0.28 +0.6
146,416 - B158DRAFT_0148 0.40 -0.0
146,522 + B158DRAFT_0148 0.70 +0.1
146,577 - B158DRAFT_0148 0.86 -0.0
146,579 + B158DRAFT_0148 0.86 -0.6
146,593 + -0.3
146,601 - -1.2
146,629 - +2.1
146,658 + +0.2
146,663 + +0.7
146,794 + +0.9
146,794 + +0.2
146,848 - -1.2
146,868 - -0.5
146,870 + +0.4
146,883 - +0.3
146,883 - +0.0
146,940 + B158DRAFT_0149 0.17 +0.4
146,963 + B158DRAFT_0149 0.21 -2.2
146,976 - B158DRAFT_0149 0.23 -0.3
146,982 - B158DRAFT_0149 0.25 +0.1
147,012 + B158DRAFT_0149 0.30 -0.5
147,019 + B158DRAFT_0149 0.31 +1.1
147,058 - B158DRAFT_0149 0.39 -0.7
147,068 + B158DRAFT_0149 0.41 +0.6
147,144 + B158DRAFT_0149 0.55 +0.0
147,195 + B158DRAFT_0149 0.64 -0.5
147,219 + B158DRAFT_0149 0.69 +0.1
147,245 + B158DRAFT_0149 0.74 -1.1
147,283 + B158DRAFT_0149 0.81 +0.9
147,343 + -1.0
147,511 + B158DRAFT_0150 0.57 +2.0
147,519 - B158DRAFT_0150 0.60 +0.0
147,582 - B158DRAFT_0150 0.88 -0.6
147,582 - B158DRAFT_0150 0.88 -1.6
147,598 - +0.8

Or see this region's nucleotide sequence