Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0142

Experiment: m.b. Cisplatin 0.025 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0140 and B158DRAFT_0141 are separated by 108 nucleotidesB158DRAFT_0141 and B158DRAFT_0142 are separated by 126 nucleotidesB158DRAFT_0142 and B158DRAFT_0143 are separated by 0 nucleotidesB158DRAFT_0143 and B158DRAFT_0144 are separated by 72 nucleotides B158DRAFT_0140: B158DRAFT_0140 - Uncharacterized protein containing a von Willebrand factor type A (vWA) domain, at 137,903 to 139,648 _0140 B158DRAFT_0141: B158DRAFT_0141 - thioesterase domain, putative, at 139,757 to 140,230 _0141 B158DRAFT_0142: B158DRAFT_0142 - ABC-type phosphate transport system, periplasmic component, at 140,357 to 141,736 _0142 B158DRAFT_0143: B158DRAFT_0143 - hypothetical protein, at 141,737 to 142,549 _0143 B158DRAFT_0144: B158DRAFT_0144 - Carbonic anhydrase, at 142,622 to 143,254 _0144 Position (kb) 140 141 142Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on + strand, within B158DRAFT_0140at 139.411 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.419 kb on - strand, within B158DRAFT_0140at 139.493 kb on - strandat 139.495 kb on + strandat 139.517 kb on - strandat 139.538 kb on + strandat 139.548 kb on - strandat 139.616 kb on + strandat 139.680 kb on + strandat 139.698 kb on + strandat 139.699 kb on - strandat 139.706 kb on - strandat 139.725 kb on - strandat 139.725 kb on - strandat 139.778 kb on + strandat 139.786 kb on - strandat 139.796 kb on - strandat 139.807 kb on + strand, within B158DRAFT_0141at 139.828 kb on + strand, within B158DRAFT_0141at 139.834 kb on + strand, within B158DRAFT_0141at 139.836 kb on - strand, within B158DRAFT_0141at 139.843 kb on + strand, within B158DRAFT_0141at 139.864 kb on - strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.872 kb on + strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.880 kb on - strand, within B158DRAFT_0141at 139.925 kb on - strand, within B158DRAFT_0141at 139.937 kb on + strand, within B158DRAFT_0141at 139.981 kb on - strand, within B158DRAFT_0141at 140.013 kb on - strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.015 kb on + strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.023 kb on - strand, within B158DRAFT_0141at 140.025 kb on + strand, within B158DRAFT_0141at 140.033 kb on - strand, within B158DRAFT_0141at 140.080 kb on + strand, within B158DRAFT_0141at 140.081 kb on - strand, within B158DRAFT_0141at 140.088 kb on - strand, within B158DRAFT_0141at 140.351 kb on - strandat 140.504 kb on + strand, within B158DRAFT_0142at 140.505 kb on + strand, within B158DRAFT_0142at 140.514 kb on + strand, within B158DRAFT_0142at 140.540 kb on - strand, within B158DRAFT_0142at 140.540 kb on - strand, within B158DRAFT_0142at 140.572 kb on + strand, within B158DRAFT_0142at 140.656 kb on + strand, within B158DRAFT_0142at 140.692 kb on + strand, within B158DRAFT_0142at 140.775 kb on - strand, within B158DRAFT_0142at 140.798 kb on + strand, within B158DRAFT_0142at 140.803 kb on + strand, within B158DRAFT_0142at 140.828 kb on + strand, within B158DRAFT_0142at 140.828 kb on + strand, within B158DRAFT_0142at 140.836 kb on - strand, within B158DRAFT_0142at 140.868 kb on + strand, within B158DRAFT_0142at 140.868 kb on + strand, within B158DRAFT_0142at 140.868 kb on + strand, within B158DRAFT_0142at 140.876 kb on - strand, within B158DRAFT_0142at 140.965 kb on + strand, within B158DRAFT_0142at 140.991 kb on - strand, within B158DRAFT_0142at 141.073 kb on + strand, within B158DRAFT_0142at 141.073 kb on + strand, within B158DRAFT_0142at 141.081 kb on - strand, within B158DRAFT_0142at 141.127 kb on - strand, within B158DRAFT_0142at 141.192 kb on + strand, within B158DRAFT_0142at 141.192 kb on + strand, within B158DRAFT_0142at 141.199 kb on + strand, within B158DRAFT_0142at 141.200 kb on - strand, within B158DRAFT_0142at 141.206 kb on - strand, within B158DRAFT_0142at 141.208 kb on + strand, within B158DRAFT_0142at 141.221 kb on - strand, within B158DRAFT_0142at 141.237 kb on - strand, within B158DRAFT_0142at 141.328 kb on - strand, within B158DRAFT_0142at 141.441 kb on + strand, within B158DRAFT_0142at 141.470 kb on - strand, within B158DRAFT_0142at 141.624 kb on + strandat 141.641 kb on + strandat 141.649 kb on - strandat 141.776 kb on + strandat 141.776 kb on + strandat 141.784 kb on - strandat 141.836 kb on - strand, within B158DRAFT_0143at 141.836 kb on - strand, within B158DRAFT_0143at 141.892 kb on + strand, within B158DRAFT_0143at 141.900 kb on - strand, within B158DRAFT_0143at 141.995 kb on + strand, within B158DRAFT_0143at 142.110 kb on - strand, within B158DRAFT_0143at 142.112 kb on + strand, within B158DRAFT_0143at 142.118 kb on - strand, within B158DRAFT_0143at 142.123 kb on - strand, within B158DRAFT_0143at 142.130 kb on - strand, within B158DRAFT_0143at 142.139 kb on + strand, within B158DRAFT_0143at 142.205 kb on + strand, within B158DRAFT_0143at 142.213 kb on - strand, within B158DRAFT_0143at 142.307 kb on - strand, within B158DRAFT_0143at 142.416 kb on + strand, within B158DRAFT_0143at 142.487 kb on + strandat 142.611 kb on - strandat 142.726 kb on - strand, within B158DRAFT_0144at 142.728 kb on + strand, within B158DRAFT_0144at 142.736 kb on - strand, within B158DRAFT_0144at 142.736 kb on - strand, within B158DRAFT_0144

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
remove
139,411 + B158DRAFT_0140 0.86 +0.4
139,411 + B158DRAFT_0140 0.86 -0.0
139,411 + B158DRAFT_0140 0.86 -0.1
139,411 + B158DRAFT_0140 0.86 +1.4
139,411 + B158DRAFT_0140 0.86 -0.2
139,411 + B158DRAFT_0140 0.86 +1.0
139,411 + B158DRAFT_0140 0.86 -0.2
139,411 + B158DRAFT_0140 0.86 -0.4
139,411 + B158DRAFT_0140 0.86 +0.1
139,411 + B158DRAFT_0140 0.86 -0.8
139,411 + B158DRAFT_0140 0.86 +0.1
139,411 + B158DRAFT_0140 0.86 -2.2
139,411 + B158DRAFT_0140 0.86 +0.0
139,411 - B158DRAFT_0140 0.86 +0.9
139,419 - B158DRAFT_0140 0.87 -0.9
139,419 - B158DRAFT_0140 0.87 +0.4
139,419 - B158DRAFT_0140 0.87 -0.0
139,419 - B158DRAFT_0140 0.87 +0.3
139,419 - B158DRAFT_0140 0.87 +0.2
139,419 - B158DRAFT_0140 0.87 +0.2
139,493 - -1.0
139,495 + -0.7
139,517 - +0.2
139,538 + -0.8
139,548 - -0.5
139,616 + -0.5
139,680 + -1.1
139,698 + -0.3
139,699 - -0.2
139,706 - +1.3
139,725 - -0.3
139,725 - -0.5
139,778 + -2.2
139,786 - -3.8
139,796 - -1.0
139,807 + B158DRAFT_0141 0.11 -0.2
139,828 + B158DRAFT_0141 0.15 -0.9
139,834 + B158DRAFT_0141 0.16 +0.4
139,836 - B158DRAFT_0141 0.17 -1.0
139,843 + B158DRAFT_0141 0.18 -0.2
139,864 - B158DRAFT_0141 0.23 -0.8
139,872 + B158DRAFT_0141 0.24 -0.3
139,872 + B158DRAFT_0141 0.24 +0.6
139,872 + B158DRAFT_0141 0.24 -0.7
139,872 + B158DRAFT_0141 0.24 +1.3
139,872 + B158DRAFT_0141 0.24 +0.2
139,880 - B158DRAFT_0141 0.26 +0.0
139,880 - B158DRAFT_0141 0.26 -0.2
139,880 - B158DRAFT_0141 0.26 +0.6
139,880 - B158DRAFT_0141 0.26 +0.2
139,925 - B158DRAFT_0141 0.35 -0.3
139,937 + B158DRAFT_0141 0.38 +0.1
139,981 - B158DRAFT_0141 0.47 -1.1
140,013 - B158DRAFT_0141 0.54 +0.1
140,015 + B158DRAFT_0141 0.54 -0.8
140,015 + B158DRAFT_0141 0.54 -1.1
140,015 + B158DRAFT_0141 0.54 -3.1
140,015 + B158DRAFT_0141 0.54 +1.3
140,015 + B158DRAFT_0141 0.54 +0.1
140,023 - B158DRAFT_0141 0.56 -0.2
140,023 - B158DRAFT_0141 0.56 -1.4
140,023 - B158DRAFT_0141 0.56 +0.9
140,023 - B158DRAFT_0141 0.56 +2.2
140,023 - B158DRAFT_0141 0.56 +0.5
140,023 - B158DRAFT_0141 0.56 +0.0
140,025 + B158DRAFT_0141 0.57 +0.9
140,033 - B158DRAFT_0141 0.58 -0.5
140,080 + B158DRAFT_0141 0.68 -3.5
140,081 - B158DRAFT_0141 0.68 -1.3
140,088 - B158DRAFT_0141 0.70 -0.1
140,351 - -0.3
140,504 + B158DRAFT_0142 0.11 +1.2
140,505 + B158DRAFT_0142 0.11 -0.5
140,514 + B158DRAFT_0142 0.11 -4.8
140,540 - B158DRAFT_0142 0.13 -1.7
140,540 - B158DRAFT_0142 0.13 +1.4
140,572 + B158DRAFT_0142 0.16 -0.3
140,656 + B158DRAFT_0142 0.22 +0.1
140,692 + B158DRAFT_0142 0.24 -0.6
140,775 - B158DRAFT_0142 0.30 -0.4
140,798 + B158DRAFT_0142 0.32 -0.6
140,803 + B158DRAFT_0142 0.32 -1.9
140,828 + B158DRAFT_0142 0.34 -0.2
140,828 + B158DRAFT_0142 0.34 -0.1
140,836 - B158DRAFT_0142 0.35 +0.4
140,868 + B158DRAFT_0142 0.37 -0.6
140,868 + B158DRAFT_0142 0.37 -0.8
140,868 + B158DRAFT_0142 0.37 -0.1
140,876 - B158DRAFT_0142 0.38 +0.1
140,965 + B158DRAFT_0142 0.44 +0.3
140,991 - B158DRAFT_0142 0.46 -0.4
141,073 + B158DRAFT_0142 0.52 -1.4
141,073 + B158DRAFT_0142 0.52 -0.8
141,081 - B158DRAFT_0142 0.52 -0.8
141,127 - B158DRAFT_0142 0.56 +0.2
141,192 + B158DRAFT_0142 0.61 -0.9
141,192 + B158DRAFT_0142 0.61 -1.1
141,199 + B158DRAFT_0142 0.61 -3.4
141,200 - B158DRAFT_0142 0.61 +0.1
141,206 - B158DRAFT_0142 0.62 +2.1
141,208 + B158DRAFT_0142 0.62 -2.8
141,221 - B158DRAFT_0142 0.63 +0.1
141,237 - B158DRAFT_0142 0.64 -0.1
141,328 - B158DRAFT_0142 0.70 -0.6
141,441 + B158DRAFT_0142 0.79 +0.4
141,470 - B158DRAFT_0142 0.81 +0.5
141,624 + -0.7
141,641 + -0.5
141,649 - -0.8
141,776 + -0.6
141,776 + -0.3
141,784 - -0.1
141,836 - B158DRAFT_0143 0.12 +0.1
141,836 - B158DRAFT_0143 0.12 +0.1
141,892 + B158DRAFT_0143 0.19 +0.1
141,900 - B158DRAFT_0143 0.20 -0.0
141,995 + B158DRAFT_0143 0.32 -0.5
142,110 - B158DRAFT_0143 0.46 -1.5
142,112 + B158DRAFT_0143 0.46 +0.9
142,118 - B158DRAFT_0143 0.47 +0.6
142,123 - B158DRAFT_0143 0.47 -2.0
142,130 - B158DRAFT_0143 0.48 +0.1
142,139 + B158DRAFT_0143 0.49 +0.1
142,205 + B158DRAFT_0143 0.58 -0.2
142,213 - B158DRAFT_0143 0.59 +0.6
142,307 - B158DRAFT_0143 0.70 -0.1
142,416 + B158DRAFT_0143 0.84 +0.0
142,487 + -1.8
142,611 - +0.4
142,726 - B158DRAFT_0144 0.16 -0.1
142,728 + B158DRAFT_0144 0.17 -0.3
142,736 - B158DRAFT_0144 0.18 -0.1
142,736 - B158DRAFT_0144 0.18 -0.7

Or see this region's nucleotide sequence