Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2440

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2438 and B158DRAFT_2439 are separated by 148 nucleotidesB158DRAFT_2439 and B158DRAFT_2440 are separated by 23 nucleotidesB158DRAFT_2440 and B158DRAFT_2441 are separated by 132 nucleotides B158DRAFT_2438: B158DRAFT_2438 - hypothetical protein, at 609,856 to 611,433 _2438 B158DRAFT_2439: B158DRAFT_2439 - Peroxiredoxin, at 611,582 to 612,043 _2439 B158DRAFT_2440: B158DRAFT_2440 - Putative Zn-dependent protease, contains TPR repeats, at 612,067 to 613,566 _2440 B158DRAFT_2441: B158DRAFT_2441 - Predicted permease, at 613,699 to 614,829 _2441 Position (kb) 612 613 614Strain fitness (log2 ratio) -2 -1 0 1 2 3at 611.113 kb on + strand, within B158DRAFT_2438at 611.125 kb on + strand, within B158DRAFT_2438at 611.141 kb on + strand, within B158DRAFT_2438at 611.163 kb on + strand, within B158DRAFT_2438at 611.189 kb on + strand, within B158DRAFT_2438at 611.274 kb on + strand, within B158DRAFT_2438at 611.293 kb on + strandat 611.299 kb on - strandat 611.299 kb on - strandat 611.299 kb on - strandat 611.301 kb on - strandat 611.301 kb on - strandat 611.340 kb on + strandat 611.377 kb on - strandat 611.386 kb on + strandat 611.386 kb on + strandat 611.386 kb on + strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.404 kb on - strandat 611.416 kb on - strandat 611.419 kb on - strandat 611.419 kb on - strandat 611.429 kb on + strandat 611.437 kb on - strandat 611.476 kb on - strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.490 kb on - strandat 611.645 kb on - strand, within B158DRAFT_2439at 611.725 kb on - strand, within B158DRAFT_2439at 611.728 kb on - strand, within B158DRAFT_2439at 611.784 kb on + strand, within B158DRAFT_2439at 611.792 kb on - strand, within B158DRAFT_2439at 611.833 kb on - strand, within B158DRAFT_2439at 612.050 kb on - strandat 612.064 kb on + strandat 612.064 kb on + strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.133 kb on + strandat 612.133 kb on + strandat 612.133 kb on + strandat 612.141 kb on - strandat 612.161 kb on + strandat 612.161 kb on + strandat 612.161 kb on + strandat 612.179 kb on - strandat 612.223 kb on - strand, within B158DRAFT_2440at 612.223 kb on - strand, within B158DRAFT_2440at 612.235 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.248 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.294 kb on - strand, within B158DRAFT_2440at 612.368 kb on + strand, within B158DRAFT_2440at 612.368 kb on + strand, within B158DRAFT_2440at 612.376 kb on - strand, within B158DRAFT_2440at 612.402 kb on - strand, within B158DRAFT_2440at 612.551 kb on - strand, within B158DRAFT_2440at 612.619 kb on - strand, within B158DRAFT_2440at 612.771 kb on - strand, within B158DRAFT_2440at 612.785 kb on + strand, within B158DRAFT_2440at 612.854 kb on + strand, within B158DRAFT_2440at 612.887 kb on + strand, within B158DRAFT_2440at 612.887 kb on + strand, within B158DRAFT_2440at 612.973 kb on + strand, within B158DRAFT_2440at 612.991 kb on - strand, within B158DRAFT_2440at 612.998 kb on - strand, within B158DRAFT_2440at 613.030 kb on - strand, within B158DRAFT_2440at 613.059 kb on - strand, within B158DRAFT_2440at 613.103 kb on + strand, within B158DRAFT_2440at 613.103 kb on + strand, within B158DRAFT_2440at 613.111 kb on - strand, within B158DRAFT_2440at 613.111 kb on - strand, within B158DRAFT_2440at 613.127 kb on + strand, within B158DRAFT_2440at 613.137 kb on + strand, within B158DRAFT_2440at 613.137 kb on + strand, within B158DRAFT_2440at 613.137 kb on + strand, within B158DRAFT_2440at 613.144 kb on + strand, within B158DRAFT_2440at 613.144 kb on + strand, within B158DRAFT_2440at 613.144 kb on + strand, within B158DRAFT_2440at 613.144 kb on + strand, within B158DRAFT_2440at 613.145 kb on - strand, within B158DRAFT_2440at 613.145 kb on - strand, within B158DRAFT_2440at 613.145 kb on - strand, within B158DRAFT_2440at 613.145 kb on - strand, within B158DRAFT_2440at 613.152 kb on - strand, within B158DRAFT_2440at 613.152 kb on - strand, within B158DRAFT_2440at 613.152 kb on - strand, within B158DRAFT_2440at 613.152 kb on - strand, within B158DRAFT_2440at 613.186 kb on + strand, within B158DRAFT_2440at 613.186 kb on + strand, within B158DRAFT_2440at 613.186 kb on + strand, within B158DRAFT_2440at 613.194 kb on - strand, within B158DRAFT_2440at 613.194 kb on - strand, within B158DRAFT_2440at 613.198 kb on + strand, within B158DRAFT_2440at 613.214 kb on + strand, within B158DRAFT_2440at 613.284 kb on + strand, within B158DRAFT_2440at 613.284 kb on - strand, within B158DRAFT_2440at 613.297 kb on - strand, within B158DRAFT_2440at 613.314 kb on - strand, within B158DRAFT_2440at 613.320 kb on + strand, within B158DRAFT_2440at 613.324 kb on + strand, within B158DRAFT_2440at 613.324 kb on + strand, within B158DRAFT_2440at 613.331 kb on + strand, within B158DRAFT_2440at 613.453 kb on - strandat 613.499 kb on - strandat 613.499 kb on - strandat 613.526 kb on + strandat 613.533 kb on + strandat 613.533 kb on + strandat 613.541 kb on - strandat 613.611 kb on + strandat 613.611 kb on + strandat 613.617 kb on + strandat 613.773 kb on - strandat 613.801 kb on + strandat 613.904 kb on - strand, within B158DRAFT_2441at 613.941 kb on - strand, within B158DRAFT_2441at 613.970 kb on - strand, within B158DRAFT_2441at 614.000 kb on - strand, within B158DRAFT_2441at 614.007 kb on + strand, within B158DRAFT_2441at 614.015 kb on - strand, within B158DRAFT_2441at 614.015 kb on - strand, within B158DRAFT_2441at 614.015 kb on - strand, within B158DRAFT_2441at 614.026 kb on + strand, within B158DRAFT_2441at 614.075 kb on + strand, within B158DRAFT_2441at 614.075 kb on + strand, within B158DRAFT_2441at 614.080 kb on + strand, within B158DRAFT_2441at 614.083 kb on - strand, within B158DRAFT_2441at 614.083 kb on - strand, within B158DRAFT_2441at 614.083 kb on - strand, within B158DRAFT_2441at 614.088 kb on - strand, within B158DRAFT_2441at 614.088 kb on - strand, within B158DRAFT_2441at 614.088 kb on - strand, within B158DRAFT_2441at 614.094 kb on - strand, within B158DRAFT_2441at 614.104 kb on + strand, within B158DRAFT_2441at 614.129 kb on - strand, within B158DRAFT_2441at 614.149 kb on + strand, within B158DRAFT_2441at 614.149 kb on + strand, within B158DRAFT_2441at 614.157 kb on - strand, within B158DRAFT_2441at 614.167 kb on - strand, within B158DRAFT_2441at 614.169 kb on - strand, within B158DRAFT_2441at 614.255 kb on + strand, within B158DRAFT_2441at 614.255 kb on + strand, within B158DRAFT_2441at 614.296 kb on + strand, within B158DRAFT_2441at 614.401 kb on + strand, within B158DRAFT_2441at 614.406 kb on + strand, within B158DRAFT_2441at 614.409 kb on - strand, within B158DRAFT_2441at 614.416 kb on + strand, within B158DRAFT_2441at 614.426 kb on + strand, within B158DRAFT_2441at 614.426 kb on + strand, within B158DRAFT_2441at 614.432 kb on + strand, within B158DRAFT_2441at 614.440 kb on - strand, within B158DRAFT_2441at 614.441 kb on + strand, within B158DRAFT_2441at 614.449 kb on - strand, within B158DRAFT_2441at 614.516 kb on + strand, within B158DRAFT_2441

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
remove
611,113 + B158DRAFT_2438 0.80 -0.6
611,125 + B158DRAFT_2438 0.80 -1.6
611,141 + B158DRAFT_2438 0.81 -0.4
611,163 + B158DRAFT_2438 0.83 +0.8
611,189 + B158DRAFT_2438 0.84 -0.4
611,274 + B158DRAFT_2438 0.90 -0.0
611,293 + -0.3
611,299 - -0.5
611,299 - -1.0
611,299 - +0.2
611,301 - +0.8
611,301 - +0.0
611,340 + +1.1
611,377 - +0.3
611,386 + -1.5
611,386 + -0.4
611,386 + -0.9
611,394 - -0.4
611,394 - +0.3
611,394 - -2.0
611,394 - -0.7
611,394 - -0.8
611,394 - +0.6
611,404 - +1.0
611,416 - -0.8
611,419 - -0.0
611,419 - -1.7
611,429 + +0.2
611,437 - +1.5
611,476 - +0.2
611,482 + +0.8
611,482 + -0.1
611,482 + -1.3
611,482 + -0.1
611,490 - +0.3
611,645 - B158DRAFT_2439 0.14 -0.9
611,725 - B158DRAFT_2439 0.31 +0.8
611,728 - B158DRAFT_2439 0.32 -2.6
611,784 + B158DRAFT_2439 0.44 -0.7
611,792 - B158DRAFT_2439 0.45 -0.1
611,833 - B158DRAFT_2439 0.54 -0.7
612,050 - +1.7
612,064 + -0.4
612,064 + -1.8
612,072 - -0.2
612,072 - -1.4
612,072 - +0.8
612,072 - -1.4
612,133 + +0.7
612,133 + +0.5
612,133 + +0.9
612,141 - +0.4
612,161 + +1.3
612,161 + +0.8
612,161 + +1.4
612,179 - +0.7
612,223 - B158DRAFT_2440 0.10 +0.7
612,223 - B158DRAFT_2440 0.10 +1.1
612,235 + B158DRAFT_2440 0.11 +1.2
612,241 + B158DRAFT_2440 0.12 +1.1
612,241 + B158DRAFT_2440 0.12 +1.3
612,241 + B158DRAFT_2440 0.12 +2.0
612,241 + B158DRAFT_2440 0.12 +1.4
612,241 + B158DRAFT_2440 0.12 +1.3
612,248 - B158DRAFT_2440 0.12 +2.2
612,249 - B158DRAFT_2440 0.12 +0.8
612,249 - B158DRAFT_2440 0.12 -0.1
612,249 - B158DRAFT_2440 0.12 +0.9
612,249 - B158DRAFT_2440 0.12 +2.2
612,249 - B158DRAFT_2440 0.12 +1.8
612,270 - B158DRAFT_2440 0.14 +1.7
612,270 - B158DRAFT_2440 0.14 +1.0
612,270 - B158DRAFT_2440 0.14 +1.5
612,270 - B158DRAFT_2440 0.14 +1.2
612,281 + B158DRAFT_2440 0.14 +1.2
612,281 + B158DRAFT_2440 0.14 +0.9
612,281 + B158DRAFT_2440 0.14 +1.6
612,281 + B158DRAFT_2440 0.14 +1.3
612,289 - B158DRAFT_2440 0.15 +0.7
612,289 - B158DRAFT_2440 0.15 +3.3
612,289 - B158DRAFT_2440 0.15 +1.9
612,289 - B158DRAFT_2440 0.15 +1.1
612,289 - B158DRAFT_2440 0.15 +2.2
612,289 - B158DRAFT_2440 0.15 +1.3
612,289 - B158DRAFT_2440 0.15 +1.8
612,289 - B158DRAFT_2440 0.15 +1.3
612,294 - B158DRAFT_2440 0.15 +1.9
612,368 + B158DRAFT_2440 0.20 +0.6
612,368 + B158DRAFT_2440 0.20 +1.0
612,376 - B158DRAFT_2440 0.21 +1.4
612,402 - B158DRAFT_2440 0.22 +1.6
612,551 - B158DRAFT_2440 0.32 +1.4
612,619 - B158DRAFT_2440 0.37 +1.3
612,771 - B158DRAFT_2440 0.47 +0.9
612,785 + B158DRAFT_2440 0.48 +0.6
612,854 + B158DRAFT_2440 0.52 +1.5
612,887 + B158DRAFT_2440 0.55 +0.9
612,887 + B158DRAFT_2440 0.55 +0.8
612,973 + B158DRAFT_2440 0.60 +1.5
612,991 - B158DRAFT_2440 0.62 +1.4
612,998 - B158DRAFT_2440 0.62 +1.5
613,030 - B158DRAFT_2440 0.64 +1.0
613,059 - B158DRAFT_2440 0.66 +0.1
613,103 + B158DRAFT_2440 0.69 +1.0
613,103 + B158DRAFT_2440 0.69 +1.9
613,111 - B158DRAFT_2440 0.70 +1.2
613,111 - B158DRAFT_2440 0.70 +1.5
613,127 + B158DRAFT_2440 0.71 +0.9
613,137 + B158DRAFT_2440 0.71 +2.8
613,137 + B158DRAFT_2440 0.71 +1.3
613,137 + B158DRAFT_2440 0.71 +1.5
613,144 + B158DRAFT_2440 0.72 +1.3
613,144 + B158DRAFT_2440 0.72 +1.3
613,144 + B158DRAFT_2440 0.72 +1.7
613,144 + B158DRAFT_2440 0.72 +1.1
613,145 - B158DRAFT_2440 0.72 +1.6
613,145 - B158DRAFT_2440 0.72 +0.8
613,145 - B158DRAFT_2440 0.72 +1.5
613,145 - B158DRAFT_2440 0.72 +0.9
613,152 - B158DRAFT_2440 0.72 +2.1
613,152 - B158DRAFT_2440 0.72 +1.8
613,152 - B158DRAFT_2440 0.72 +1.4
613,152 - B158DRAFT_2440 0.72 +1.2
613,186 + B158DRAFT_2440 0.75 +1.3
613,186 + B158DRAFT_2440 0.75 +1.6
613,186 + B158DRAFT_2440 0.75 -0.1
613,194 - B158DRAFT_2440 0.75 +0.6
613,194 - B158DRAFT_2440 0.75 +1.2
613,198 + B158DRAFT_2440 0.75 +0.8
613,214 + B158DRAFT_2440 0.76 +1.1
613,284 + B158DRAFT_2440 0.81 +1.5
613,284 - B158DRAFT_2440 0.81 +2.0
613,297 - B158DRAFT_2440 0.82 +1.3
613,314 - B158DRAFT_2440 0.83 +1.2
613,320 + B158DRAFT_2440 0.84 +1.4
613,324 + B158DRAFT_2440 0.84 +0.8
613,324 + B158DRAFT_2440 0.84 +1.2
613,331 + B158DRAFT_2440 0.84 +1.6
613,453 - +1.2
613,499 - +1.4
613,499 - +1.3
613,526 + +1.1
613,533 + +1.3
613,533 + +1.6
613,541 - +1.6
613,611 + +1.0
613,611 + +0.7
613,617 + +0.9
613,773 - -0.8
613,801 + -0.4
613,904 - B158DRAFT_2441 0.18 -0.3
613,941 - B158DRAFT_2441 0.21 -0.0
613,970 - B158DRAFT_2441 0.24 +1.2
614,000 - B158DRAFT_2441 0.27 -0.7
614,007 + B158DRAFT_2441 0.27 -0.2
614,015 - B158DRAFT_2441 0.28 -1.4
614,015 - B158DRAFT_2441 0.28 +0.2
614,015 - B158DRAFT_2441 0.28 -0.6
614,026 + B158DRAFT_2441 0.29 -0.2
614,075 + B158DRAFT_2441 0.33 -0.9
614,075 + B158DRAFT_2441 0.33 -0.5
614,080 + B158DRAFT_2441 0.34 -0.5
614,083 - B158DRAFT_2441 0.34 -1.1
614,083 - B158DRAFT_2441 0.34 +0.4
614,083 - B158DRAFT_2441 0.34 -0.8
614,088 - B158DRAFT_2441 0.34 -0.1
614,088 - B158DRAFT_2441 0.34 -0.3
614,088 - B158DRAFT_2441 0.34 -0.4
614,094 - B158DRAFT_2441 0.35 -0.5
614,104 + B158DRAFT_2441 0.36 -0.4
614,129 - B158DRAFT_2441 0.38 -0.4
614,149 + B158DRAFT_2441 0.40 -0.7
614,149 + B158DRAFT_2441 0.40 +0.0
614,157 - B158DRAFT_2441 0.40 -0.1
614,167 - B158DRAFT_2441 0.41 +0.9
614,169 - B158DRAFT_2441 0.42 -1.0
614,255 + B158DRAFT_2441 0.49 +0.1
614,255 + B158DRAFT_2441 0.49 -1.2
614,296 + B158DRAFT_2441 0.53 +2.3
614,401 + B158DRAFT_2441 0.62 -0.2
614,406 + B158DRAFT_2441 0.63 -1.1
614,409 - B158DRAFT_2441 0.63 -0.6
614,416 + B158DRAFT_2441 0.63 -0.7
614,426 + B158DRAFT_2441 0.64 +0.7
614,426 + B158DRAFT_2441 0.64 +0.4
614,432 + B158DRAFT_2441 0.65 -0.7
614,440 - B158DRAFT_2441 0.66 -0.2
614,441 + B158DRAFT_2441 0.66 -1.9
614,449 - B158DRAFT_2441 0.66 -0.1
614,516 + B158DRAFT_2441 0.72 +0.4

Or see this region's nucleotide sequence