Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2402

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2401 and B158DRAFT_2402 are separated by 262 nucleotidesB158DRAFT_2402 and B158DRAFT_2403 are separated by 179 nucleotidesB158DRAFT_2403 and B158DRAFT_2404 are separated by 203 nucleotides B158DRAFT_2401: B158DRAFT_2401 - Protein of unknown function (DUF1329)., at 572,228 to 573,580 _2401 B158DRAFT_2402: B158DRAFT_2402 - Transcriptional regulators, at 573,843 to 574,283 _2402 B158DRAFT_2403: B158DRAFT_2403 - ribosomal protein S20, at 574,463 to 574,723 _2403 B158DRAFT_2404: B158DRAFT_2404 - integral membrane protein MviN, at 574,927 to 576,462 _2404 Position (kb) 573 574 575Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 572.853 kb on - strand, within B158DRAFT_2401at 572.855 kb on + strand, within B158DRAFT_2401at 572.898 kb on + strand, within B158DRAFT_2401at 572.927 kb on - strand, within B158DRAFT_2401at 572.948 kb on - strand, within B158DRAFT_2401at 572.958 kb on - strand, within B158DRAFT_2401at 572.979 kb on + strand, within B158DRAFT_2401at 572.989 kb on + strand, within B158DRAFT_2401at 572.989 kb on + strand, within B158DRAFT_2401at 572.997 kb on + strand, within B158DRAFT_2401at 573.007 kb on + strand, within B158DRAFT_2401at 573.012 kb on + strand, within B158DRAFT_2401at 573.020 kb on - strand, within B158DRAFT_2401at 573.020 kb on - strand, within B158DRAFT_2401at 573.054 kb on - strand, within B158DRAFT_2401at 573.060 kb on - strand, within B158DRAFT_2401at 573.087 kb on - strand, within B158DRAFT_2401at 573.111 kb on + strand, within B158DRAFT_2401at 573.118 kb on - strand, within B158DRAFT_2401at 573.123 kb on + strand, within B158DRAFT_2401at 573.128 kb on + strand, within B158DRAFT_2401at 573.131 kb on - strand, within B158DRAFT_2401at 573.136 kb on - strand, within B158DRAFT_2401at 573.141 kb on - strand, within B158DRAFT_2401at 573.194 kb on - strand, within B158DRAFT_2401at 573.220 kb on + strand, within B158DRAFT_2401at 573.228 kb on - strand, within B158DRAFT_2401at 573.230 kb on - strand, within B158DRAFT_2401at 573.231 kb on + strand, within B158DRAFT_2401at 573.231 kb on + strand, within B158DRAFT_2401at 573.231 kb on + strand, within B158DRAFT_2401at 573.239 kb on - strand, within B158DRAFT_2401at 573.306 kb on + strand, within B158DRAFT_2401at 573.314 kb on - strand, within B158DRAFT_2401at 573.370 kb on - strand, within B158DRAFT_2401at 573.383 kb on - strand, within B158DRAFT_2401at 573.388 kb on - strand, within B158DRAFT_2401at 573.397 kb on + strand, within B158DRAFT_2401at 573.402 kb on + strand, within B158DRAFT_2401at 573.410 kb on - strand, within B158DRAFT_2401at 573.418 kb on + strand, within B158DRAFT_2401at 573.468 kb on + strandat 573.468 kb on + strandat 573.473 kb on + strandat 573.473 kb on + strandat 573.476 kb on - strandat 573.476 kb on - strandat 573.476 kb on - strandat 573.485 kb on + strandat 573.485 kb on + strandat 573.493 kb on - strandat 573.547 kb on - strandat 573.625 kb on + strandat 573.975 kb on + strand, within B158DRAFT_2402at 573.993 kb on - strand, within B158DRAFT_2402at 574.018 kb on - strand, within B158DRAFT_2402at 574.028 kb on + strand, within B158DRAFT_2402at 574.029 kb on - strand, within B158DRAFT_2402at 574.036 kb on - strand, within B158DRAFT_2402at 574.049 kb on - strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.144 kb on - strand, within B158DRAFT_2402at 574.207 kb on + strand, within B158DRAFT_2402at 574.215 kb on + strand, within B158DRAFT_2402at 574.215 kb on - strand, within B158DRAFT_2402at 574.249 kb on - strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.346 kb on - strandat 574.346 kb on - strandat 574.429 kb on + strandat 574.478 kb on - strandat 574.478 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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572,853 - B158DRAFT_2401 0.46 -0.5
572,855 + B158DRAFT_2401 0.46 -0.3
572,898 + B158DRAFT_2401 0.50 +0.1
572,927 - B158DRAFT_2401 0.52 +1.2
572,948 - B158DRAFT_2401 0.53 -1.4
572,958 - B158DRAFT_2401 0.54 -0.5
572,979 + B158DRAFT_2401 0.56 +0.1
572,989 + B158DRAFT_2401 0.56 -0.6
572,989 + B158DRAFT_2401 0.56 -0.1
572,997 + B158DRAFT_2401 0.57 -0.1
573,007 + B158DRAFT_2401 0.58 -0.2
573,012 + B158DRAFT_2401 0.58 -0.8
573,020 - B158DRAFT_2401 0.59 -0.4
573,020 - B158DRAFT_2401 0.59 +0.1
573,054 - B158DRAFT_2401 0.61 -0.1
573,060 - B158DRAFT_2401 0.61 +0.3
573,087 - B158DRAFT_2401 0.63 -0.7
573,111 + B158DRAFT_2401 0.65 -0.1
573,118 - B158DRAFT_2401 0.66 +0.5
573,123 + B158DRAFT_2401 0.66 +0.5
573,128 + B158DRAFT_2401 0.67 -0.5
573,131 - B158DRAFT_2401 0.67 -1.0
573,136 - B158DRAFT_2401 0.67 +0.9
573,141 - B158DRAFT_2401 0.67 -0.1
573,194 - B158DRAFT_2401 0.71 +0.3
573,220 + B158DRAFT_2401 0.73 +1.1
573,228 - B158DRAFT_2401 0.74 -0.2
573,230 - B158DRAFT_2401 0.74 +0.2
573,231 + B158DRAFT_2401 0.74 -0.2
573,231 + B158DRAFT_2401 0.74 -1.4
573,231 + B158DRAFT_2401 0.74 -1.2
573,239 - B158DRAFT_2401 0.75 -0.3
573,306 + B158DRAFT_2401 0.80 -0.0
573,314 - B158DRAFT_2401 0.80 +0.1
573,370 - B158DRAFT_2401 0.84 -1.1
573,383 - B158DRAFT_2401 0.85 -0.8
573,388 - B158DRAFT_2401 0.86 +0.0
573,397 + B158DRAFT_2401 0.86 -1.3
573,402 + B158DRAFT_2401 0.87 -0.3
573,410 - B158DRAFT_2401 0.87 -2.3
573,418 + B158DRAFT_2401 0.88 -0.6
573,468 + +0.0
573,468 + -0.1
573,473 + +4.7
573,473 + +0.5
573,476 - +0.6
573,476 - -0.2
573,476 - -0.7
573,485 + -1.5
573,485 + -0.3
573,493 - -0.2
573,547 - +0.7
573,625 + +0.5
573,975 + B158DRAFT_2402 0.30 +0.7
573,993 - B158DRAFT_2402 0.34 -1.1
574,018 - B158DRAFT_2402 0.40 -0.4
574,028 + B158DRAFT_2402 0.42 -1.0
574,029 - B158DRAFT_2402 0.42 -1.8
574,036 - B158DRAFT_2402 0.44 -1.2
574,049 - B158DRAFT_2402 0.47 -0.9
574,118 + B158DRAFT_2402 0.62 -0.3
574,118 + B158DRAFT_2402 0.62 -0.4
574,118 + B158DRAFT_2402 0.62 -1.0
574,118 + B158DRAFT_2402 0.62 -0.4
574,118 + B158DRAFT_2402 0.62 -0.5
574,123 + B158DRAFT_2402 0.63 -0.4
574,123 + B158DRAFT_2402 0.63 -0.6
574,123 + B158DRAFT_2402 0.63 -0.5
574,123 + B158DRAFT_2402 0.63 -0.2
574,126 - B158DRAFT_2402 0.64 +0.5
574,126 - B158DRAFT_2402 0.64 +0.7
574,126 - B158DRAFT_2402 0.64 -1.1
574,131 - B158DRAFT_2402 0.65 -0.8
574,131 - B158DRAFT_2402 0.65 -0.8
574,131 - B158DRAFT_2402 0.65 -1.9
574,131 - B158DRAFT_2402 0.65 -0.8
574,131 - B158DRAFT_2402 0.65 -0.6
574,131 - B158DRAFT_2402 0.65 -0.2
574,131 - B158DRAFT_2402 0.65 +0.0
574,131 - B158DRAFT_2402 0.65 -0.3
574,144 - B158DRAFT_2402 0.68 -0.0
574,207 + B158DRAFT_2402 0.83 -1.1
574,215 + B158DRAFT_2402 0.84 -1.2
574,215 - B158DRAFT_2402 0.84 -0.7
574,249 - +0.2
574,338 + +1.1
574,338 + +0.0
574,338 + -0.7
574,346 - -1.0
574,346 - -0.4
574,429 + -0.8
574,478 - +0.6
574,478 - +0.2

Or see this region's nucleotide sequence