Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2224

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2223 and B158DRAFT_2224 are separated by 43 nucleotidesB158DRAFT_2224 and B158DRAFT_2225 are separated by 59 nucleotidesB158DRAFT_2225 and B158DRAFT_2226 overlap by 1 nucleotides B158DRAFT_2223: B158DRAFT_2223 - Outer membrane protein W, at 372,846 to 373,520 _2223 B158DRAFT_2224: B158DRAFT_2224 - Lysophospholipase L1 and related esterases, at 373,564 to 374,199 _2224 B158DRAFT_2225: B158DRAFT_2225 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 374,259 to 374,966 _2225 B158DRAFT_2226: B158DRAFT_2226 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 374,966 to 377,461 _2226 Position (kb) 373 374 375Strain fitness (log2 ratio) -2 -1 0 1 2at 372.630 kb on - strandat 372.651 kb on + strandat 372.756 kb on - strandat 372.778 kb on - strandat 372.779 kb on - strandat 372.891 kb on + strandat 372.899 kb on - strandat 372.916 kb on + strand, within B158DRAFT_2223at 372.960 kb on + strand, within B158DRAFT_2223at 372.966 kb on - strand, within B158DRAFT_2223at 372.995 kb on + strand, within B158DRAFT_2223at 373.000 kb on + strand, within B158DRAFT_2223at 373.062 kb on - strand, within B158DRAFT_2223at 373.148 kb on - strand, within B158DRAFT_2223at 373.148 kb on - strand, within B158DRAFT_2223at 373.190 kb on + strand, within B158DRAFT_2223at 373.198 kb on - strand, within B158DRAFT_2223at 373.203 kb on - strand, within B158DRAFT_2223at 373.220 kb on - strand, within B158DRAFT_2223at 373.291 kb on - strand, within B158DRAFT_2223at 373.355 kb on - strand, within B158DRAFT_2223at 373.360 kb on - strand, within B158DRAFT_2223at 373.522 kb on - strandat 373.550 kb on + strandat 373.598 kb on + strandat 373.763 kb on - strand, within B158DRAFT_2224at 373.763 kb on - strand, within B158DRAFT_2224at 373.766 kb on - strand, within B158DRAFT_2224at 373.770 kb on + strand, within B158DRAFT_2224at 373.817 kb on - strand, within B158DRAFT_2224at 373.824 kb on - strand, within B158DRAFT_2224at 373.832 kb on + strand, within B158DRAFT_2224at 373.873 kb on + strand, within B158DRAFT_2224at 373.925 kb on + strand, within B158DRAFT_2224at 373.942 kb on - strand, within B158DRAFT_2224at 373.944 kb on + strand, within B158DRAFT_2224at 373.944 kb on + strand, within B158DRAFT_2224at 373.952 kb on - strand, within B158DRAFT_2224at 373.952 kb on - strand, within B158DRAFT_2224at 373.952 kb on - strand, within B158DRAFT_2224at 373.956 kb on - strand, within B158DRAFT_2224at 373.968 kb on + strand, within B158DRAFT_2224at 373.971 kb on - strand, within B158DRAFT_2224at 373.971 kb on - strand, within B158DRAFT_2224at 373.976 kb on - strand, within B158DRAFT_2224at 373.976 kb on - strand, within B158DRAFT_2224at 374.056 kb on + strand, within B158DRAFT_2224at 374.056 kb on + strand, within B158DRAFT_2224at 374.064 kb on - strand, within B158DRAFT_2224at 374.082 kb on - strand, within B158DRAFT_2224at 374.085 kb on + strand, within B158DRAFT_2224at 374.091 kb on + strand, within B158DRAFT_2224at 374.091 kb on + strand, within B158DRAFT_2224at 374.099 kb on - strand, within B158DRAFT_2224at 374.157 kb on - strandat 374.295 kb on - strandat 374.363 kb on - strand, within B158DRAFT_2225at 374.415 kb on + strand, within B158DRAFT_2225at 374.415 kb on + strand, within B158DRAFT_2225at 374.415 kb on + strand, within B158DRAFT_2225at 374.423 kb on - strand, within B158DRAFT_2225at 374.423 kb on - strand, within B158DRAFT_2225at 374.447 kb on + strand, within B158DRAFT_2225at 374.515 kb on - strand, within B158DRAFT_2225at 374.546 kb on + strand, within B158DRAFT_2225at 374.585 kb on + strand, within B158DRAFT_2225at 374.593 kb on - strand, within B158DRAFT_2225at 374.617 kb on - strand, within B158DRAFT_2225at 374.660 kb on + strand, within B158DRAFT_2225at 374.717 kb on - strand, within B158DRAFT_2225at 374.756 kb on - strand, within B158DRAFT_2225at 374.761 kb on - strand, within B158DRAFT_2225at 374.822 kb on + strand, within B158DRAFT_2225at 374.865 kb on + strand, within B158DRAFT_2225at 374.866 kb on - strand, within B158DRAFT_2225at 374.890 kb on + strand, within B158DRAFT_2225at 374.890 kb on + strand, within B158DRAFT_2225at 374.898 kb on - strandat 374.899 kb on - strandat 374.920 kb on + strandat 374.979 kb on - strandat 375.015 kb on + strandat 375.023 kb on - strandat 375.078 kb on + strandat 375.124 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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372,630 - +0.0
372,651 + +0.3
372,756 - -0.5
372,778 - +1.5
372,779 - -0.5
372,891 + -1.0
372,899 - -0.7
372,916 + B158DRAFT_2223 0.10 +0.6
372,960 + B158DRAFT_2223 0.17 +0.0
372,966 - B158DRAFT_2223 0.18 +0.7
372,995 + B158DRAFT_2223 0.22 +0.3
373,000 + B158DRAFT_2223 0.23 -0.3
373,062 - B158DRAFT_2223 0.32 -1.1
373,148 - B158DRAFT_2223 0.45 -0.2
373,148 - B158DRAFT_2223 0.45 +0.4
373,190 + B158DRAFT_2223 0.51 -0.7
373,198 - B158DRAFT_2223 0.52 +0.1
373,203 - B158DRAFT_2223 0.53 -0.6
373,220 - B158DRAFT_2223 0.55 -0.6
373,291 - B158DRAFT_2223 0.66 +0.5
373,355 - B158DRAFT_2223 0.75 -0.2
373,360 - B158DRAFT_2223 0.76 +2.2
373,522 - -1.0
373,550 + +1.3
373,598 + -0.1
373,763 - B158DRAFT_2224 0.31 -0.3
373,763 - B158DRAFT_2224 0.31 -0.5
373,766 - B158DRAFT_2224 0.32 -1.9
373,770 + B158DRAFT_2224 0.32 +0.0
373,817 - B158DRAFT_2224 0.40 +0.5
373,824 - B158DRAFT_2224 0.41 -0.2
373,832 + B158DRAFT_2224 0.42 -0.9
373,873 + B158DRAFT_2224 0.49 -1.4
373,925 + B158DRAFT_2224 0.57 -0.2
373,942 - B158DRAFT_2224 0.59 -0.6
373,944 + B158DRAFT_2224 0.60 +0.5
373,944 + B158DRAFT_2224 0.60 -0.1
373,952 - B158DRAFT_2224 0.61 +0.3
373,952 - B158DRAFT_2224 0.61 -0.5
373,952 - B158DRAFT_2224 0.61 -0.5
373,956 - B158DRAFT_2224 0.62 -0.3
373,968 + B158DRAFT_2224 0.64 +0.3
373,971 - B158DRAFT_2224 0.64 +0.3
373,971 - B158DRAFT_2224 0.64 -0.2
373,976 - B158DRAFT_2224 0.65 +0.2
373,976 - B158DRAFT_2224 0.65 -0.6
374,056 + B158DRAFT_2224 0.77 -0.1
374,056 + B158DRAFT_2224 0.77 -2.1
374,064 - B158DRAFT_2224 0.79 +0.0
374,082 - B158DRAFT_2224 0.81 +0.3
374,085 + B158DRAFT_2224 0.82 -0.6
374,091 + B158DRAFT_2224 0.83 +0.1
374,091 + B158DRAFT_2224 0.83 -0.7
374,099 - B158DRAFT_2224 0.84 -0.8
374,157 - +0.3
374,295 - +0.5
374,363 - B158DRAFT_2225 0.15 -0.9
374,415 + B158DRAFT_2225 0.22 -0.8
374,415 + B158DRAFT_2225 0.22 -0.1
374,415 + B158DRAFT_2225 0.22 -0.7
374,423 - B158DRAFT_2225 0.23 -0.7
374,423 - B158DRAFT_2225 0.23 -0.3
374,447 + B158DRAFT_2225 0.27 -0.7
374,515 - B158DRAFT_2225 0.36 -0.2
374,546 + B158DRAFT_2225 0.41 -0.4
374,585 + B158DRAFT_2225 0.46 -0.0
374,593 - B158DRAFT_2225 0.47 +0.1
374,617 - B158DRAFT_2225 0.51 -0.3
374,660 + B158DRAFT_2225 0.57 -0.8
374,717 - B158DRAFT_2225 0.65 -0.3
374,756 - B158DRAFT_2225 0.70 +0.4
374,761 - B158DRAFT_2225 0.71 -0.2
374,822 + B158DRAFT_2225 0.80 -0.5
374,865 + B158DRAFT_2225 0.86 -0.7
374,866 - B158DRAFT_2225 0.86 +0.0
374,890 + B158DRAFT_2225 0.89 -0.9
374,890 + B158DRAFT_2225 0.89 +0.1
374,898 - -0.2
374,899 - +0.1
374,920 + -0.0
374,979 - +0.3
375,015 + -1.2
375,023 - -0.5
375,078 + +0.9
375,124 + -0.7

Or see this region's nucleotide sequence