Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2206

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2205 and B158DRAFT_2206 are separated by 201 nucleotidesB158DRAFT_2206 and B158DRAFT_2207 are separated by 29 nucleotidesB158DRAFT_2207 and B158DRAFT_2208 are separated by 379 nucleotides B158DRAFT_2205: B158DRAFT_2205 - hypothetical protein, at 349,396 to 351,474 _2205 B158DRAFT_2206: B158DRAFT_2206 - DNA-binding winged-HTH domains, at 351,676 to 353,898 _2206 B158DRAFT_2207: B158DRAFT_2207 - hypothetical protein, at 353,928 to 354,125 _2207 B158DRAFT_2208: B158DRAFT_2208 - transcriptional regulator, GntR family, at 354,505 to 355,227 _2208 Position (kb) 351 352 353 354Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 350.702 kb on - strand, within B158DRAFT_2205at 350.702 kb on - strand, within B158DRAFT_2205at 350.725 kb on - strand, within B158DRAFT_2205at 350.754 kb on + strand, within B158DRAFT_2205at 350.778 kb on - strand, within B158DRAFT_2205at 350.798 kb on - strand, within B158DRAFT_2205at 350.798 kb on - strand, within B158DRAFT_2205at 350.798 kb on - strand, within B158DRAFT_2205at 350.867 kb on + strand, within B158DRAFT_2205at 350.877 kb on - strand, within B158DRAFT_2205at 350.941 kb on + strand, within B158DRAFT_2205at 350.951 kb on + strand, within B158DRAFT_2205at 350.951 kb on + strand, within B158DRAFT_2205at 350.951 kb on + strand, within B158DRAFT_2205at 350.958 kb on + strand, within B158DRAFT_2205at 350.958 kb on + strand, within B158DRAFT_2205at 350.958 kb on + strand, within B158DRAFT_2205at 350.959 kb on - strand, within B158DRAFT_2205at 350.966 kb on - strand, within B158DRAFT_2205at 350.966 kb on - strand, within B158DRAFT_2205at 350.966 kb on - strand, within B158DRAFT_2205at 351.024 kb on - strand, within B158DRAFT_2205at 351.071 kb on + strand, within B158DRAFT_2205at 351.079 kb on + strand, within B158DRAFT_2205at 351.100 kb on + strand, within B158DRAFT_2205at 351.153 kb on + strand, within B158DRAFT_2205at 351.156 kb on + strand, within B158DRAFT_2205at 351.181 kb on + strand, within B158DRAFT_2205at 351.186 kb on + strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.211 kb on + strand, within B158DRAFT_2205at 351.211 kb on + strand, within B158DRAFT_2205at 351.211 kb on + strand, within B158DRAFT_2205at 351.219 kb on - strand, within B158DRAFT_2205at 351.219 kb on - strand, within B158DRAFT_2205at 351.227 kb on - strand, within B158DRAFT_2205at 351.259 kb on - strand, within B158DRAFT_2205at 351.265 kb on + strand, within B158DRAFT_2205at 351.289 kb on - strandat 351.290 kb on - strandat 351.339 kb on + strandat 351.366 kb on - strandat 351.493 kb on - strandat 351.501 kb on + strandat 351.539 kb on - strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.674 kb on - strandat 351.674 kb on - strandat 351.674 kb on - strandat 351.674 kb on - strandat 351.750 kb on + strandat 351.750 kb on + strandat 351.758 kb on - strandat 351.763 kb on - strandat 351.770 kb on - strandat 351.770 kb on - strandat 351.799 kb on + strandat 351.799 kb on + strandat 351.801 kb on + strandat 351.855 kb on + strandat 351.875 kb on - strandat 351.963 kb on + strand, within B158DRAFT_2206at 352.015 kb on + strand, within B158DRAFT_2206at 352.023 kb on - strand, within B158DRAFT_2206at 352.023 kb on - strand, within B158DRAFT_2206at 352.084 kb on + strand, within B158DRAFT_2206at 352.092 kb on - strand, within B158DRAFT_2206at 352.096 kb on + strand, within B158DRAFT_2206at 352.122 kb on + strand, within B158DRAFT_2206at 352.338 kb on - strand, within B158DRAFT_2206at 352.438 kb on - strand, within B158DRAFT_2206at 352.483 kb on + strand, within B158DRAFT_2206at 352.520 kb on - strand, within B158DRAFT_2206at 352.580 kb on + strand, within B158DRAFT_2206at 352.580 kb on - strand, within B158DRAFT_2206at 352.580 kb on - strand, within B158DRAFT_2206at 352.588 kb on - strand, within B158DRAFT_2206at 352.622 kb on - strand, within B158DRAFT_2206at 352.622 kb on - strand, within B158DRAFT_2206at 352.711 kb on - strand, within B158DRAFT_2206at 352.711 kb on - strand, within B158DRAFT_2206at 352.711 kb on - strand, within B158DRAFT_2206at 352.745 kb on - strand, within B158DRAFT_2206at 352.747 kb on + strand, within B158DRAFT_2206at 352.783 kb on - strand, within B158DRAFT_2206at 352.898 kb on + strand, within B158DRAFT_2206at 352.906 kb on - strand, within B158DRAFT_2206at 352.906 kb on - strand, within B158DRAFT_2206at 352.906 kb on - strand, within B158DRAFT_2206at 352.910 kb on + strand, within B158DRAFT_2206at 352.918 kb on - strand, within B158DRAFT_2206at 353.014 kb on + strand, within B158DRAFT_2206at 353.014 kb on + strand, within B158DRAFT_2206at 353.073 kb on - strand, within B158DRAFT_2206at 353.119 kb on + strand, within B158DRAFT_2206at 353.204 kb on + strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.223 kb on - strand, within B158DRAFT_2206at 353.223 kb on - strand, within B158DRAFT_2206at 353.311 kb on - strand, within B158DRAFT_2206at 353.313 kb on - strand, within B158DRAFT_2206at 353.313 kb on - strand, within B158DRAFT_2206at 353.421 kb on + strand, within B158DRAFT_2206at 353.456 kb on + strand, within B158DRAFT_2206at 353.542 kb on - strand, within B158DRAFT_2206at 353.598 kb on + strand, within B158DRAFT_2206at 353.606 kb on - strand, within B158DRAFT_2206at 353.606 kb on - strand, within B158DRAFT_2206at 353.619 kb on - strand, within B158DRAFT_2206at 353.642 kb on - strand, within B158DRAFT_2206at 353.663 kb on + strand, within B158DRAFT_2206at 353.671 kb on - strand, within B158DRAFT_2206at 353.677 kb on + strandat 353.679 kb on - strandat 353.687 kb on + strandat 353.687 kb on + strandat 353.687 kb on + strandat 353.695 kb on - strandat 353.739 kb on + strandat 353.753 kb on + strandat 353.777 kb on - strandat 353.812 kb on - strandat 353.892 kb on + strandat 353.892 kb on + strandat 353.892 kb on + strandat 353.900 kb on - strandat 353.900 kb on - strandat 353.900 kb on - strandat 353.915 kb on - strandat 353.915 kb on - strandat 353.963 kb on + strand, within B158DRAFT_2207at 353.975 kb on + strand, within B158DRAFT_2207at 353.975 kb on + strand, within B158DRAFT_2207at 353.983 kb on - strand, within B158DRAFT_2207at 353.983 kb on - strand, within B158DRAFT_2207at 354.014 kb on + strand, within B158DRAFT_2207at 354.024 kb on + strand, within B158DRAFT_2207at 354.034 kb on + strand, within B158DRAFT_2207at 354.097 kb on + strand, within B158DRAFT_2207at 354.187 kb on + strandat 354.205 kb on + strandat 354.213 kb on - strandat 354.278 kb on + strandat 354.283 kb on + strandat 354.291 kb on - strandat 354.291 kb on - strandat 354.313 kb on + strandat 354.336 kb on + strandat 354.336 kb on + strandat 354.336 kb on + strandat 354.339 kb on - strandat 354.344 kb on - strandat 354.504 kb on - strandat 354.515 kb on - strandat 354.531 kb on - strandat 354.746 kb on + strand, within B158DRAFT_2208at 354.754 kb on - strand, within B158DRAFT_2208at 354.764 kb on - strand, within B158DRAFT_2208at 354.799 kb on - strand, within B158DRAFT_2208at 354.819 kb on + strand, within B158DRAFT_2208

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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350,702 - B158DRAFT_2205 0.63 -2.5
350,702 - B158DRAFT_2205 0.63 +0.3
350,725 - B158DRAFT_2205 0.64 -0.1
350,754 + B158DRAFT_2205 0.65 +0.0
350,778 - B158DRAFT_2205 0.66 -0.5
350,798 - B158DRAFT_2205 0.67 -0.4
350,798 - B158DRAFT_2205 0.67 -0.3
350,798 - B158DRAFT_2205 0.67 -0.8
350,867 + B158DRAFT_2205 0.71 -0.0
350,877 - B158DRAFT_2205 0.71 +0.2
350,941 + B158DRAFT_2205 0.74 -0.4
350,951 + B158DRAFT_2205 0.75 -0.7
350,951 + B158DRAFT_2205 0.75 -1.2
350,951 + B158DRAFT_2205 0.75 -0.2
350,958 + B158DRAFT_2205 0.75 -1.2
350,958 + B158DRAFT_2205 0.75 -0.5
350,958 + B158DRAFT_2205 0.75 -0.2
350,959 - B158DRAFT_2205 0.75 -0.5
350,966 - B158DRAFT_2205 0.76 -0.3
350,966 - B158DRAFT_2205 0.76 -1.3
350,966 - B158DRAFT_2205 0.76 +0.5
351,024 - B158DRAFT_2205 0.78 +0.9
351,071 + B158DRAFT_2205 0.81 -0.4
351,079 + B158DRAFT_2205 0.81 -0.3
351,100 + B158DRAFT_2205 0.82 +0.1
351,153 + B158DRAFT_2205 0.85 +1.3
351,156 + B158DRAFT_2205 0.85 -0.2
351,181 + B158DRAFT_2205 0.86 -0.2
351,186 + B158DRAFT_2205 0.86 +0.5
351,189 - B158DRAFT_2205 0.86 +0.6
351,189 - B158DRAFT_2205 0.86 -0.2
351,189 - B158DRAFT_2205 0.86 +0.7
351,189 - B158DRAFT_2205 0.86 +0.6
351,211 + B158DRAFT_2205 0.87 -0.3
351,211 + B158DRAFT_2205 0.87 +0.9
351,211 + B158DRAFT_2205 0.87 -2.6
351,219 - B158DRAFT_2205 0.88 -0.1
351,219 - B158DRAFT_2205 0.88 +0.0
351,227 - B158DRAFT_2205 0.88 -0.1
351,259 - B158DRAFT_2205 0.90 +0.7
351,265 + B158DRAFT_2205 0.90 +0.2
351,289 - +0.9
351,290 - +1.2
351,339 + -0.1
351,366 - -0.0
351,493 - -0.1
351,501 + -0.4
351,539 - -0.3
351,666 + -0.4
351,666 + -0.2
351,666 + -0.9
351,666 + -1.1
351,666 + -0.9
351,666 + -0.6
351,674 - -0.1
351,674 - -1.3
351,674 - -0.1
351,674 - -0.5
351,750 + +0.4
351,750 + +0.4
351,758 - -0.1
351,763 - -0.6
351,770 - -1.0
351,770 - +0.3
351,799 + +0.3
351,799 + -0.0
351,801 + +0.3
351,855 + -0.5
351,875 - +0.3
351,963 + B158DRAFT_2206 0.13 -0.6
352,015 + B158DRAFT_2206 0.15 -1.1
352,023 - B158DRAFT_2206 0.16 -2.1
352,023 - B158DRAFT_2206 0.16 -0.4
352,084 + B158DRAFT_2206 0.18 +1.3
352,092 - B158DRAFT_2206 0.19 -0.2
352,096 + B158DRAFT_2206 0.19 -0.2
352,122 + B158DRAFT_2206 0.20 -0.6
352,338 - B158DRAFT_2206 0.30 -0.1
352,438 - B158DRAFT_2206 0.34 -0.1
352,483 + B158DRAFT_2206 0.36 -0.3
352,520 - B158DRAFT_2206 0.38 +0.0
352,580 + B158DRAFT_2206 0.41 +0.6
352,580 - B158DRAFT_2206 0.41 +0.1
352,580 - B158DRAFT_2206 0.41 -1.3
352,588 - B158DRAFT_2206 0.41 +0.4
352,622 - B158DRAFT_2206 0.43 +1.3
352,622 - B158DRAFT_2206 0.43 -0.6
352,711 - B158DRAFT_2206 0.47 -0.2
352,711 - B158DRAFT_2206 0.47 -0.6
352,711 - B158DRAFT_2206 0.47 -0.2
352,745 - B158DRAFT_2206 0.48 -0.6
352,747 + B158DRAFT_2206 0.48 +1.9
352,783 - B158DRAFT_2206 0.50 -0.6
352,898 + B158DRAFT_2206 0.55 +0.2
352,906 - B158DRAFT_2206 0.55 -0.1
352,906 - B158DRAFT_2206 0.55 +0.1
352,906 - B158DRAFT_2206 0.55 +0.8
352,910 + B158DRAFT_2206 0.56 -0.2
352,918 - B158DRAFT_2206 0.56 -0.0
353,014 + B158DRAFT_2206 0.60 -0.2
353,014 + B158DRAFT_2206 0.60 -1.0
353,073 - B158DRAFT_2206 0.63 -0.3
353,119 + B158DRAFT_2206 0.65 -0.4
353,204 + B158DRAFT_2206 0.69 +0.5
353,212 - B158DRAFT_2206 0.69 +0.1
353,212 - B158DRAFT_2206 0.69 -1.3
353,212 - B158DRAFT_2206 0.69 -0.9
353,215 + B158DRAFT_2206 0.69 +0.3
353,215 + B158DRAFT_2206 0.69 +0.4
353,215 + B158DRAFT_2206 0.69 +0.2
353,223 - B158DRAFT_2206 0.70 +0.1
353,223 - B158DRAFT_2206 0.70 +0.3
353,311 - B158DRAFT_2206 0.74 -0.9
353,313 - B158DRAFT_2206 0.74 +0.6
353,313 - B158DRAFT_2206 0.74 -0.1
353,421 + B158DRAFT_2206 0.78 -0.2
353,456 + B158DRAFT_2206 0.80 -1.8
353,542 - B158DRAFT_2206 0.84 -0.0
353,598 + B158DRAFT_2206 0.86 -0.1
353,606 - B158DRAFT_2206 0.87 +0.6
353,606 - B158DRAFT_2206 0.87 +0.3
353,619 - B158DRAFT_2206 0.87 -1.0
353,642 - B158DRAFT_2206 0.88 -0.4
353,663 + B158DRAFT_2206 0.89 +0.2
353,671 - B158DRAFT_2206 0.90 +1.6
353,677 + -1.4
353,679 - +0.1
353,687 + -0.4
353,687 + -0.2
353,687 + -0.3
353,695 - +0.0
353,739 + -1.2
353,753 + -0.2
353,777 - -0.5
353,812 - -0.2
353,892 + -0.2
353,892 + -0.1
353,892 + -0.6
353,900 - -0.3
353,900 - -0.2
353,900 - -0.0
353,915 - -0.5
353,915 - -1.3
353,963 + B158DRAFT_2207 0.18 +0.3
353,975 + B158DRAFT_2207 0.24 +0.7
353,975 + B158DRAFT_2207 0.24 +0.4
353,983 - B158DRAFT_2207 0.28 +0.0
353,983 - B158DRAFT_2207 0.28 -0.5
354,014 + B158DRAFT_2207 0.43 -0.9
354,024 + B158DRAFT_2207 0.48 +0.0
354,034 + B158DRAFT_2207 0.54 +0.4
354,097 + B158DRAFT_2207 0.85 +0.5
354,187 + -0.2
354,205 + +0.1
354,213 - +0.0
354,278 + -0.3
354,283 + +1.3
354,291 - -0.1
354,291 - +0.3
354,313 + +0.6
354,336 + -1.0
354,336 + -1.4
354,336 + -0.6
354,339 - -0.8
354,344 - -0.5
354,504 - -0.4
354,515 - -0.5
354,531 - -1.3
354,746 + B158DRAFT_2208 0.33 -0.5
354,754 - B158DRAFT_2208 0.34 -0.4
354,764 - B158DRAFT_2208 0.36 -1.3
354,799 - B158DRAFT_2208 0.41 -3.1
354,819 + B158DRAFT_2208 0.43 -1.2

Or see this region's nucleotide sequence