Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2176

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2175 and B158DRAFT_2176 are separated by 75 nucleotidesB158DRAFT_2176 and B158DRAFT_2177 are separated by 83 nucleotidesB158DRAFT_2177 and B158DRAFT_2178 are separated by 29 nucleotidesB158DRAFT_2178 and B158DRAFT_2179 overlap by 10 nucleotides B158DRAFT_2175: B158DRAFT_2175 - Uncharacterized protein conserved in bacteria, at 321,845 to 323,692 _2175 B158DRAFT_2176: B158DRAFT_2176 - folate-binding protein YgfZ, at 323,768 to 324,706 _2176 B158DRAFT_2177: B158DRAFT_2177 - Uncharacterized conserved protein, at 324,790 to 325,044 _2177 B158DRAFT_2178: B158DRAFT_2178 - hypothetical protein, at 325,074 to 325,580 _2178 B158DRAFT_2179: B158DRAFT_2179 - L-aspartate oxidase (EC 1.4.3.16), at 325,571 to 327,187 _2179 Position (kb) 323 324 325Strain fitness (log2 ratio) -2 -1 0 1at 322.830 kb on + strand, within B158DRAFT_2175at 322.888 kb on + strand, within B158DRAFT_2175at 322.950 kb on + strand, within B158DRAFT_2175at 322.960 kb on + strand, within B158DRAFT_2175at 322.960 kb on + strand, within B158DRAFT_2175at 322.968 kb on - strand, within B158DRAFT_2175at 322.968 kb on - strand, within B158DRAFT_2175at 322.968 kb on - strand, within B158DRAFT_2175at 322.970 kb on + strand, within B158DRAFT_2175at 323.028 kb on - strand, within B158DRAFT_2175at 323.049 kb on - strand, within B158DRAFT_2175at 323.063 kb on - strand, within B158DRAFT_2175at 323.082 kb on - strand, within B158DRAFT_2175at 323.093 kb on + strand, within B158DRAFT_2175at 323.120 kb on - strand, within B158DRAFT_2175at 323.131 kb on + strand, within B158DRAFT_2175at 323.270 kb on + strand, within B158DRAFT_2175at 323.318 kb on - strand, within B158DRAFT_2175at 323.318 kb on - strand, within B158DRAFT_2175at 323.318 kb on - strand, within B158DRAFT_2175at 323.329 kb on - strand, within B158DRAFT_2175at 323.399 kb on + strand, within B158DRAFT_2175at 323.399 kb on + strand, within B158DRAFT_2175at 323.409 kb on + strand, within B158DRAFT_2175at 323.409 kb on + strand, within B158DRAFT_2175at 323.425 kb on - strand, within B158DRAFT_2175at 323.527 kb on + strandat 323.629 kb on + strandat 323.760 kb on + strandat 324.658 kb on - strandat 324.738 kb on + strandat 324.754 kb on - strandat 324.754 kb on - strandat 325.100 kb on + strandat 325.100 kb on + strandat 325.108 kb on - strandat 325.137 kb on + strand, within B158DRAFT_2178at 325.153 kb on + strand, within B158DRAFT_2178at 325.153 kb on + strand, within B158DRAFT_2178at 325.186 kb on - strand, within B158DRAFT_2178at 325.257 kb on + strand, within B158DRAFT_2178at 325.315 kb on + strand, within B158DRAFT_2178at 325.332 kb on - strand, within B158DRAFT_2178at 325.444 kb on + strand, within B158DRAFT_2178at 325.531 kb on - strandat 325.534 kb on - strandat 325.534 kb on - strandat 325.591 kb on + strandat 325.612 kb on - strandat 325.637 kb on - strandat 325.641 kb on + strandat 325.641 kb on + strandat 325.649 kb on - strandat 325.649 kb on - strandat 325.649 kb on - strandat 325.680 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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322,830 + B158DRAFT_2175 0.53 -0.6
322,888 + B158DRAFT_2175 0.56 -1.0
322,950 + B158DRAFT_2175 0.60 +0.0
322,960 + B158DRAFT_2175 0.60 -0.9
322,960 + B158DRAFT_2175 0.60 +0.0
322,968 - B158DRAFT_2175 0.61 -0.2
322,968 - B158DRAFT_2175 0.61 +0.2
322,968 - B158DRAFT_2175 0.61 -0.8
322,970 + B158DRAFT_2175 0.61 -0.5
323,028 - B158DRAFT_2175 0.64 +0.6
323,049 - B158DRAFT_2175 0.65 -0.2
323,063 - B158DRAFT_2175 0.66 -0.0
323,082 - B158DRAFT_2175 0.67 +0.0
323,093 + B158DRAFT_2175 0.68 -0.4
323,120 - B158DRAFT_2175 0.69 -0.3
323,131 + B158DRAFT_2175 0.70 -0.9
323,270 + B158DRAFT_2175 0.77 +0.2
323,318 - B158DRAFT_2175 0.80 -0.3
323,318 - B158DRAFT_2175 0.80 -0.2
323,318 - B158DRAFT_2175 0.80 +0.1
323,329 - B158DRAFT_2175 0.80 +0.9
323,399 + B158DRAFT_2175 0.84 +0.6
323,399 + B158DRAFT_2175 0.84 +0.5
323,409 + B158DRAFT_2175 0.85 -0.3
323,409 + B158DRAFT_2175 0.85 -0.7
323,425 - B158DRAFT_2175 0.85 -0.7
323,527 + -2.3
323,629 + -2.6
323,760 + +0.3
324,658 - -0.8
324,738 + -1.4
324,754 - -0.3
324,754 - +0.3
325,100 + +1.2
325,100 + +0.2
325,108 - +0.3
325,137 + B158DRAFT_2178 0.12 -0.7
325,153 + B158DRAFT_2178 0.16 -0.0
325,153 + B158DRAFT_2178 0.16 -0.4
325,186 - B158DRAFT_2178 0.22 +0.2
325,257 + B158DRAFT_2178 0.36 +1.3
325,315 + B158DRAFT_2178 0.48 -0.7
325,332 - B158DRAFT_2178 0.51 -0.8
325,444 + B158DRAFT_2178 0.73 +1.1
325,531 - -0.5
325,534 - +0.3
325,534 - +0.6
325,591 + -0.5
325,612 - +0.2
325,637 - +1.4
325,641 + -0.1
325,641 + +1.2
325,649 - -0.7
325,649 - -0.5
325,649 - +0.6
325,680 - +1.0

Or see this region's nucleotide sequence