Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2131

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2130 and B158DRAFT_2131 are separated by 277 nucleotidesB158DRAFT_2131 and B158DRAFT_2132 are separated by 9 nucleotidesB158DRAFT_2132 and B158DRAFT_2133 are separated by 1 nucleotidesB158DRAFT_2133 and B158DRAFT_2134 are separated by 116 nucleotides B158DRAFT_2130: B158DRAFT_2130 - Membrane proteins related to metalloendopeptidases, at 264,124 to 265,044 _2130 B158DRAFT_2131: B158DRAFT_2131 - preprotein translocase, SecA subunit, at 265,322 to 268,030 _2131 B158DRAFT_2132: B158DRAFT_2132 - mutator mutT protein, at 268,040 to 268,426 _2132 B158DRAFT_2133: B158DRAFT_2133 - Uncharacterized protein conserved in bacteria, at 268,428 to 268,625 _2133 B158DRAFT_2134: B158DRAFT_2134 - Negative regulator of beta-lactamase expression, at 268,742 to 269,308 _2134 Position (kb) 265 266 267 268 269Strain fitness (log2 ratio) -2 -1 0 1 2 3at 264.382 kb on + strand, within B158DRAFT_2130at 264.541 kb on - strand, within B158DRAFT_2130at 264.556 kb on - strand, within B158DRAFT_2130at 264.561 kb on + strand, within B158DRAFT_2130at 264.696 kb on + strand, within B158DRAFT_2130at 264.741 kb on + strand, within B158DRAFT_2130at 264.741 kb on + strand, within B158DRAFT_2130at 264.742 kb on - strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.773 kb on + strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.781 kb on - strand, within B158DRAFT_2130at 264.931 kb on + strand, within B158DRAFT_2130at 264.936 kb on + strand, within B158DRAFT_2130at 264.939 kb on - strand, within B158DRAFT_2130at 264.949 kb on - strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.951 kb on + strand, within B158DRAFT_2130at 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 264.959 kb on - strandat 265.014 kb on + strandat 265.022 kb on - strandat 265.177 kb on + strandat 265.179 kb on + strandat 265.202 kb on + strandat 267.837 kb on - strandat 267.880 kb on + strandat 267.880 kb on + strandat 267.880 kb on + strandat 267.888 kb on - strandat 267.915 kb on + strandat 267.915 kb on - strandat 267.934 kb on - strandat 267.949 kb on + strandat 267.949 kb on + strandat 267.949 kb on + strandat 267.949 kb on + strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.986 kb on - strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.076 kb on - strandat 268.076 kb on - strandat 268.076 kb on - strandat 268.251 kb on - strand, within B158DRAFT_2132at 268.261 kb on - strand, within B158DRAFT_2132at 268.266 kb on - strand, within B158DRAFT_2132at 268.298 kb on + strand, within B158DRAFT_2132at 268.333 kb on - strand, within B158DRAFT_2132at 268.334 kb on - strand, within B158DRAFT_2132at 268.348 kb on - strand, within B158DRAFT_2132at 268.541 kb on - strand, within B158DRAFT_2133at 268.594 kb on + strand, within B158DRAFT_2133at 268.659 kb on - strandat 268.695 kb on - strandat 268.728 kb on + strandat 268.730 kb on + strandat 268.736 kb on - strandat 268.736 kb on - strandat 268.736 kb on - strandat 268.738 kb on + strandat 268.788 kb on - strandat 268.788 kb on - strandat 268.788 kb on - strandat 268.893 kb on - strand, within B158DRAFT_2134at 268.893 kb on - strand, within B158DRAFT_2134at 268.894 kb on + strand, within B158DRAFT_2134at 268.909 kb on + strand, within B158DRAFT_2134at 268.923 kb on + strand, within B158DRAFT_2134at 268.931 kb on - strand, within B158DRAFT_2134at 268.931 kb on - strand, within B158DRAFT_2134at 268.931 kb on - strand, within B158DRAFT_2134at 268.932 kb on + strand, within B158DRAFT_2134at 268.932 kb on - strand, within B158DRAFT_2134at 268.965 kb on + strand, within B158DRAFT_2134

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
remove
264,382 + B158DRAFT_2130 0.28 +0.7
264,541 - B158DRAFT_2130 0.45 +0.8
264,556 - B158DRAFT_2130 0.47 +1.1
264,561 + B158DRAFT_2130 0.47 +1.0
264,696 + B158DRAFT_2130 0.62 +0.5
264,741 + B158DRAFT_2130 0.67 +1.0
264,741 + B158DRAFT_2130 0.67 +0.7
264,742 - B158DRAFT_2130 0.67 +0.5
264,773 + B158DRAFT_2130 0.70 +1.1
264,773 + B158DRAFT_2130 0.70 +0.6
264,773 + B158DRAFT_2130 0.70 +1.4
264,773 + B158DRAFT_2130 0.70 +0.8
264,781 - B158DRAFT_2130 0.71 +0.9
264,781 - B158DRAFT_2130 0.71 +0.7
264,781 - B158DRAFT_2130 0.71 +1.7
264,781 - B158DRAFT_2130 0.71 +1.2
264,781 - B158DRAFT_2130 0.71 +0.5
264,781 - B158DRAFT_2130 0.71 +0.8
264,781 - B158DRAFT_2130 0.71 +0.9
264,781 - B158DRAFT_2130 0.71 +0.3
264,931 + B158DRAFT_2130 0.88 +0.7
264,936 + B158DRAFT_2130 0.88 +0.6
264,939 - B158DRAFT_2130 0.88 +0.4
264,949 - B158DRAFT_2130 0.90 -0.1
264,951 + B158DRAFT_2130 0.90 +0.6
264,951 + B158DRAFT_2130 0.90 +1.2
264,951 + B158DRAFT_2130 0.90 +0.4
264,951 + B158DRAFT_2130 0.90 +0.7
264,951 + B158DRAFT_2130 0.90 +1.3
264,951 + B158DRAFT_2130 0.90 +0.1
264,951 + B158DRAFT_2130 0.90 +1.3
264,951 + B158DRAFT_2130 0.90 +1.0
264,959 - +0.6
264,959 - +0.3
264,959 - +0.4
264,959 - +1.4
264,959 - +0.3
264,959 - +1.1
264,959 - +0.6
264,959 - +0.5
264,959 - +0.9
264,959 - +0.1
264,959 - +0.4
264,959 - +0.7
265,014 + -0.2
265,022 - -0.0
265,177 + +0.6
265,179 + +0.6
265,202 + +0.0
267,837 - -0.3
267,880 + -0.4
267,880 + -0.4
267,880 + -0.3
267,888 - +2.9
267,915 + +0.1
267,915 - +0.3
267,934 - -0.1
267,949 + -0.2
267,949 + +0.6
267,949 + +0.3
267,949 + -0.4
267,957 - +0.1
267,957 - -0.0
267,957 - -1.1
267,957 - +2.1
267,957 - +0.5
267,986 - +0.9
268,068 + -0.7
268,068 + -0.5
268,068 + -1.0
268,068 + +0.3
268,068 + -0.4
268,076 - +0.9
268,076 - -0.5
268,076 - -0.7
268,251 - B158DRAFT_2132 0.55 -0.9
268,261 - B158DRAFT_2132 0.57 -2.3
268,266 - B158DRAFT_2132 0.58 -2.2
268,298 + B158DRAFT_2132 0.67 +0.1
268,333 - B158DRAFT_2132 0.76 -1.1
268,334 - B158DRAFT_2132 0.76 -0.4
268,348 - B158DRAFT_2132 0.80 -1.5
268,541 - B158DRAFT_2133 0.57 +0.3
268,594 + B158DRAFT_2133 0.84 -0.4
268,659 - -0.8
268,695 - +0.0
268,728 + +0.3
268,730 + +0.3
268,736 - -1.0
268,736 - -1.9
268,736 - -1.0
268,738 + -0.5
268,788 - +0.9
268,788 - +1.0
268,788 - -0.5
268,893 - B158DRAFT_2134 0.27 -0.3
268,893 - B158DRAFT_2134 0.27 -1.9
268,894 + B158DRAFT_2134 0.27 -0.7
268,909 + B158DRAFT_2134 0.29 -0.6
268,923 + B158DRAFT_2134 0.32 -1.1
268,931 - B158DRAFT_2134 0.33 +1.6
268,931 - B158DRAFT_2134 0.33 +1.2
268,931 - B158DRAFT_2134 0.33 +0.9
268,932 + B158DRAFT_2134 0.34 +1.6
268,932 - B158DRAFT_2134 0.34 +3.2
268,965 + B158DRAFT_2134 0.39 +0.6

Or see this region's nucleotide sequence