Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2103

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2101 and B158DRAFT_2102 overlap by 4 nucleotidesB158DRAFT_2102 and B158DRAFT_2103 are separated by 64 nucleotidesB158DRAFT_2103 and B158DRAFT_2104 overlap by 1 nucleotidesB158DRAFT_2104 and B158DRAFT_2105 are separated by 87 nucleotides B158DRAFT_2101: B158DRAFT_2101 - Cytochrome b subunit of the bc complex, at 235,581 to 236,792 _2101 B158DRAFT_2102: B158DRAFT_2102 - Cytochrome c1, at 236,789 to 237,631 _2102 B158DRAFT_2103: B158DRAFT_2103 - Glutathione S-transferase, at 237,696 to 238,328 _2103 B158DRAFT_2104: B158DRAFT_2104 - Stringent starvation protein B, at 238,328 to 238,780 _2104 B158DRAFT_2105: B158DRAFT_2105 - Predicted periplasmic or secreted lipoprotein, at 238,868 to 239,395 _2105 Position (kb) 237 238 239Strain fitness (log2 ratio) -1 0 1 2at 236.766 kb on + strandat 236.774 kb on + strandat 236.776 kb on + strandat 236.984 kb on + strand, within B158DRAFT_2102at 237.646 kb on - strandat 237.684 kb on + strandat 237.692 kb on - strandat 237.859 kb on + strand, within B158DRAFT_2103at 237.864 kb on + strand, within B158DRAFT_2103at 238.014 kb on + strand, within B158DRAFT_2103at 238.141 kb on - strand, within B158DRAFT_2103at 238.261 kb on - strand, within B158DRAFT_2103at 238.401 kb on - strand, within B158DRAFT_2104at 238.403 kb on + strand, within B158DRAFT_2104at 238.403 kb on + strand, within B158DRAFT_2104at 238.403 kb on + strand, within B158DRAFT_2104at 238.403 kb on + strand, within B158DRAFT_2104at 238.403 kb on + strand, within B158DRAFT_2104at 238.403 kb on + strand, within B158DRAFT_2104at 238.411 kb on - strand, within B158DRAFT_2104at 238.411 kb on - strand, within B158DRAFT_2104at 238.411 kb on - strand, within B158DRAFT_2104at 238.411 kb on - strand, within B158DRAFT_2104at 238.411 kb on - strand, within B158DRAFT_2104at 238.582 kb on - strand, within B158DRAFT_2104at 238.830 kb on + strandat 238.830 kb on + strandat 238.830 kb on + strandat 238.838 kb on - strandat 238.930 kb on + strand, within B158DRAFT_2105at 238.943 kb on - strand, within B158DRAFT_2105at 238.943 kb on - strand, within B158DRAFT_2105at 238.943 kb on - strand, within B158DRAFT_2105at 239.079 kb on + strand, within B158DRAFT_2105at 239.087 kb on - strand, within B158DRAFT_2105at 239.087 kb on - strand, within B158DRAFT_2105at 239.150 kb on - strand, within B158DRAFT_2105at 239.293 kb on - strand, within B158DRAFT_2105at 239.300 kb on + strand, within B158DRAFT_2105at 239.300 kb on + strand, within B158DRAFT_2105

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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236,766 + +0.0
236,774 + +0.4
236,776 + -1.1
236,984 + B158DRAFT_2102 0.23 +0.9
237,646 - +0.4
237,684 + +1.1
237,692 - -0.6
237,859 + B158DRAFT_2103 0.26 +1.0
237,864 + B158DRAFT_2103 0.27 +2.2
238,014 + B158DRAFT_2103 0.50 -0.9
238,141 - B158DRAFT_2103 0.70 -1.2
238,261 - B158DRAFT_2103 0.89 +0.4
238,401 - B158DRAFT_2104 0.16 -0.2
238,403 + B158DRAFT_2104 0.17 -1.3
238,403 + B158DRAFT_2104 0.17 -0.8
238,403 + B158DRAFT_2104 0.17 -0.9
238,403 + B158DRAFT_2104 0.17 -0.1
238,403 + B158DRAFT_2104 0.17 -1.0
238,403 + B158DRAFT_2104 0.17 -0.6
238,411 - B158DRAFT_2104 0.18 -0.2
238,411 - B158DRAFT_2104 0.18 -0.8
238,411 - B158DRAFT_2104 0.18 -0.7
238,411 - B158DRAFT_2104 0.18 -0.9
238,411 - B158DRAFT_2104 0.18 -0.1
238,582 - B158DRAFT_2104 0.56 +0.8
238,830 + -0.1
238,830 + +0.2
238,830 + -1.0
238,838 - -0.1
238,930 + B158DRAFT_2105 0.12 -0.7
238,943 - B158DRAFT_2105 0.14 -0.8
238,943 - B158DRAFT_2105 0.14 -0.2
238,943 - B158DRAFT_2105 0.14 -0.4
239,079 + B158DRAFT_2105 0.40 -0.5
239,087 - B158DRAFT_2105 0.41 -0.0
239,087 - B158DRAFT_2105 0.41 -0.3
239,150 - B158DRAFT_2105 0.53 -0.8
239,293 - B158DRAFT_2105 0.80 +0.4
239,300 + B158DRAFT_2105 0.82 +0.5
239,300 + B158DRAFT_2105 0.82 -0.7

Or see this region's nucleotide sequence