Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1804

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1802 and B158DRAFT_1803 are separated by 33 nucleotidesB158DRAFT_1803 and B158DRAFT_1804 are separated by 41 nucleotidesB158DRAFT_1804 and B158DRAFT_1805 are separated by 283 nucleotides B158DRAFT_1802: B158DRAFT_1802 - Saccharopine dehydrogenase and related proteins, at 1,901,036 to 1,902,178 _1802 B158DRAFT_1803: B158DRAFT_1803 - Plasmid pRiA4b ORF-3-like protein., at 1,902,212 to 1,902,787 _1803 B158DRAFT_1804: B158DRAFT_1804 - EF hand., at 1,902,829 to 1,903,068 _1804 B158DRAFT_1805: B158DRAFT_1805 - NAD-dependent aldehyde dehydrogenases, at 1,903,352 to 1,904,872 _1805 Position (kb) 1902 1903 1904Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 1901.863 kb on + strand, within B158DRAFT_1802at 1901.865 kb on - strand, within B158DRAFT_1802at 1901.876 kb on + strand, within B158DRAFT_1802at 1901.936 kb on + strand, within B158DRAFT_1802at 1901.941 kb on + strand, within B158DRAFT_1802at 1901.941 kb on + strand, within B158DRAFT_1802at 1901.941 kb on + strand, within B158DRAFT_1802at 1901.949 kb on - strand, within B158DRAFT_1802at 1901.999 kb on + strand, within B158DRAFT_1802at 1902.067 kb on + strandat 1902.075 kb on - strandat 1902.079 kb on + strandat 1902.079 kb on + strandat 1902.121 kb on - strandat 1902.202 kb on - strandat 1902.259 kb on - strandat 1902.261 kb on + strandat 1902.261 kb on + strandat 1902.269 kb on - strandat 1902.269 kb on - strandat 1902.269 kb on - strandat 1902.269 kb on - strandat 1902.391 kb on + strand, within B158DRAFT_1803at 1902.402 kb on + strand, within B158DRAFT_1803at 1902.475 kb on - strand, within B158DRAFT_1803at 1902.489 kb on + strand, within B158DRAFT_1803at 1902.556 kb on + strand, within B158DRAFT_1803at 1902.556 kb on + strand, within B158DRAFT_1803at 1902.564 kb on - strand, within B158DRAFT_1803at 1902.568 kb on + strand, within B158DRAFT_1803at 1902.606 kb on + strand, within B158DRAFT_1803at 1902.653 kb on + strand, within B158DRAFT_1803at 1902.661 kb on - strand, within B158DRAFT_1803at 1902.661 kb on - strand, within B158DRAFT_1803at 1902.661 kb on - strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.663 kb on + strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.671 kb on - strand, within B158DRAFT_1803at 1902.712 kb on + strand, within B158DRAFT_1803at 1902.712 kb on - strand, within B158DRAFT_1803at 1902.720 kb on - strand, within B158DRAFT_1803at 1902.753 kb on + strandat 1902.755 kb on + strandat 1902.763 kb on - strandat 1902.768 kb on - strandat 1902.787 kb on - strandat 1902.969 kb on + strand, within B158DRAFT_1804at 1902.969 kb on + strand, within B158DRAFT_1804at 1902.969 kb on + strand, within B158DRAFT_1804at 1902.969 kb on + strand, within B158DRAFT_1804at 1902.977 kb on - strand, within B158DRAFT_1804at 1902.977 kb on - strand, within B158DRAFT_1804at 1902.977 kb on - strand, within B158DRAFT_1804at 1902.977 kb on - strand, within B158DRAFT_1804at 1902.977 kb on - strand, within B158DRAFT_1804at 1903.030 kb on + strand, within B158DRAFT_1804at 1903.165 kb on + strandat 1903.165 kb on + strandat 1903.189 kb on + strandat 1903.189 kb on + strandat 1903.189 kb on + strandat 1903.189 kb on + strandat 1903.189 kb on + strandat 1903.189 kb on + strandat 1903.189 kb on + strandat 1903.189 kb on + strandat 1903.197 kb on - strandat 1903.197 kb on - strandat 1903.197 kb on - strandat 1903.197 kb on - strandat 1903.197 kb on - strandat 1903.197 kb on - strandat 1903.205 kb on + strandat 1903.406 kb on + strandat 1903.411 kb on + strandat 1903.411 kb on + strandat 1903.411 kb on + strandat 1903.568 kb on + strand, within B158DRAFT_1805at 1903.721 kb on + strand, within B158DRAFT_1805at 1903.764 kb on + strand, within B158DRAFT_1805

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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1,901,863 + B158DRAFT_1802 0.72 -0.5
1,901,865 - B158DRAFT_1802 0.73 +0.3
1,901,876 + B158DRAFT_1802 0.73 -1.6
1,901,936 + B158DRAFT_1802 0.79 +0.0
1,901,941 + B158DRAFT_1802 0.79 +0.3
1,901,941 + B158DRAFT_1802 0.79 -0.9
1,901,941 + B158DRAFT_1802 0.79 -2.0
1,901,949 - B158DRAFT_1802 0.80 +0.5
1,901,999 + B158DRAFT_1802 0.84 -2.5
1,902,067 + +0.2
1,902,075 - +0.5
1,902,079 + +0.7
1,902,079 + +1.0
1,902,121 - +0.0
1,902,202 - -0.1
1,902,259 - +0.2
1,902,261 + -1.5
1,902,261 + +0.2
1,902,269 - +0.1
1,902,269 - -0.3
1,902,269 - +0.1
1,902,269 - -1.3
1,902,391 + B158DRAFT_1803 0.31 +1.4
1,902,402 + B158DRAFT_1803 0.33 -1.3
1,902,475 - B158DRAFT_1803 0.46 +0.4
1,902,489 + B158DRAFT_1803 0.48 -0.1
1,902,556 + B158DRAFT_1803 0.60 +0.5
1,902,556 + B158DRAFT_1803 0.60 -1.5
1,902,564 - B158DRAFT_1803 0.61 -0.6
1,902,568 + B158DRAFT_1803 0.62 +0.8
1,902,606 + B158DRAFT_1803 0.68 +0.5
1,902,653 + B158DRAFT_1803 0.77 -0.0
1,902,661 - B158DRAFT_1803 0.78 +0.2
1,902,661 - B158DRAFT_1803 0.78 +0.2
1,902,661 - B158DRAFT_1803 0.78 +0.1
1,902,663 + B158DRAFT_1803 0.78 -0.3
1,902,663 + B158DRAFT_1803 0.78 +0.6
1,902,663 + B158DRAFT_1803 0.78 +1.6
1,902,663 + B158DRAFT_1803 0.78 -0.5
1,902,663 + B158DRAFT_1803 0.78 -1.9
1,902,663 + B158DRAFT_1803 0.78 -0.3
1,902,663 + B158DRAFT_1803 0.78 +0.1
1,902,663 + B158DRAFT_1803 0.78 -1.0
1,902,663 + B158DRAFT_1803 0.78 +0.3
1,902,663 + B158DRAFT_1803 0.78 -0.5
1,902,663 + B158DRAFT_1803 0.78 -0.3
1,902,663 + B158DRAFT_1803 0.78 -1.1
1,902,663 + B158DRAFT_1803 0.78 -1.1
1,902,663 + B158DRAFT_1803 0.78 -0.0
1,902,663 + B158DRAFT_1803 0.78 -0.1
1,902,663 + B158DRAFT_1803 0.78 -0.8
1,902,663 + B158DRAFT_1803 0.78 -0.4
1,902,663 + B158DRAFT_1803 0.78 +0.1
1,902,663 + B158DRAFT_1803 0.78 +0.7
1,902,663 + B158DRAFT_1803 0.78 +0.0
1,902,663 + B158DRAFT_1803 0.78 -0.2
1,902,663 + B158DRAFT_1803 0.78 +0.2
1,902,671 - B158DRAFT_1803 0.80 -0.7
1,902,671 - B158DRAFT_1803 0.80 -0.5
1,902,671 - B158DRAFT_1803 0.80 -0.6
1,902,671 - B158DRAFT_1803 0.80 +0.3
1,902,671 - B158DRAFT_1803 0.80 +0.3
1,902,671 - B158DRAFT_1803 0.80 -1.0
1,902,671 - B158DRAFT_1803 0.80 -0.5
1,902,671 - B158DRAFT_1803 0.80 +0.0
1,902,671 - B158DRAFT_1803 0.80 -0.6
1,902,671 - B158DRAFT_1803 0.80 +1.1
1,902,671 - B158DRAFT_1803 0.80 -0.2
1,902,671 - B158DRAFT_1803 0.80 -0.6
1,902,671 - B158DRAFT_1803 0.80 -0.8
1,902,671 - B158DRAFT_1803 0.80 -1.0
1,902,671 - B158DRAFT_1803 0.80 -0.4
1,902,671 - B158DRAFT_1803 0.80 -0.0
1,902,671 - B158DRAFT_1803 0.80 -0.0
1,902,671 - B158DRAFT_1803 0.80 +0.2
1,902,671 - B158DRAFT_1803 0.80 -0.4
1,902,671 - B158DRAFT_1803 0.80 -0.6
1,902,671 - B158DRAFT_1803 0.80 -0.4
1,902,712 + B158DRAFT_1803 0.87 +0.8
1,902,712 - B158DRAFT_1803 0.87 -0.1
1,902,720 - B158DRAFT_1803 0.88 +0.4
1,902,753 + +0.0
1,902,755 + -0.4
1,902,763 - +0.3
1,902,768 - -0.2
1,902,787 - -0.3
1,902,969 + B158DRAFT_1804 0.58 -0.1
1,902,969 + B158DRAFT_1804 0.58 +1.0
1,902,969 + B158DRAFT_1804 0.58 +0.8
1,902,969 + B158DRAFT_1804 0.58 +1.2
1,902,977 - B158DRAFT_1804 0.62 +0.0
1,902,977 - B158DRAFT_1804 0.62 -0.1
1,902,977 - B158DRAFT_1804 0.62 +1.2
1,902,977 - B158DRAFT_1804 0.62 -1.7
1,902,977 - B158DRAFT_1804 0.62 +0.0
1,903,030 + B158DRAFT_1804 0.84 -0.1
1,903,165 + -0.0
1,903,165 + +0.1
1,903,189 + -0.9
1,903,189 + +0.3
1,903,189 + +0.3
1,903,189 + -0.0
1,903,189 + -0.7
1,903,189 + -0.6
1,903,189 + -0.8
1,903,189 + +0.1
1,903,197 - -1.3
1,903,197 - +0.2
1,903,197 - +0.5
1,903,197 - +0.7
1,903,197 - -0.3
1,903,197 - -0.1
1,903,205 + +0.0
1,903,406 + +6.1
1,903,411 + +6.2
1,903,411 + +5.3
1,903,411 + +4.6
1,903,568 + B158DRAFT_1805 0.14 +7.1
1,903,721 + B158DRAFT_1805 0.24 +6.2
1,903,764 + B158DRAFT_1805 0.27 +5.3

Or see this region's nucleotide sequence