Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1647

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1645 and B158DRAFT_1646 are separated by 124 nucleotidesB158DRAFT_1646 and B158DRAFT_1647 are separated by 20 nucleotidesB158DRAFT_1647 and B158DRAFT_1648 are separated by 98 nucleotidesB158DRAFT_1648 and B158DRAFT_1649 are separated by 81 nucleotides B158DRAFT_1645: B158DRAFT_1645 - hypothetical protein, at 1,715,308 to 1,716,165 _1645 B158DRAFT_1646: B158DRAFT_1646 - hypothetical protein, at 1,716,290 to 1,716,625 _1646 B158DRAFT_1647: B158DRAFT_1647 - hypothetical protein, at 1,716,646 to 1,717,209 _1647 B158DRAFT_1648: B158DRAFT_1648 - hypothetical protein, at 1,717,308 to 1,718,027 _1648 B158DRAFT_1649: B158DRAFT_1649 - ThiF family., at 1,718,109 to 1,720,379 _1649 Position (kb) 1716 1717 1718Strain fitness (log2 ratio) -2 -1 0 1at 1715.708 kb on - strand, within B158DRAFT_1645at 1715.737 kb on + strand, within B158DRAFT_1645at 1715.781 kb on + strand, within B158DRAFT_1645at 1715.811 kb on + strand, within B158DRAFT_1645at 1715.861 kb on + strand, within B158DRAFT_1645at 1715.869 kb on - strand, within B158DRAFT_1645at 1715.869 kb on - strand, within B158DRAFT_1645at 1715.879 kb on - strand, within B158DRAFT_1645at 1715.891 kb on + strand, within B158DRAFT_1645at 1715.906 kb on + strand, within B158DRAFT_1645at 1715.932 kb on - strand, within B158DRAFT_1645at 1715.994 kb on + strand, within B158DRAFT_1645at 1715.994 kb on + strand, within B158DRAFT_1645at 1715.994 kb on + strand, within B158DRAFT_1645at 1715.994 kb on + strand, within B158DRAFT_1645at 1715.994 kb on + strand, within B158DRAFT_1645at 1715.999 kb on + strand, within B158DRAFT_1645at 1716.002 kb on - strand, within B158DRAFT_1645at 1716.002 kb on - strand, within B158DRAFT_1645at 1716.002 kb on - strand, within B158DRAFT_1645at 1716.002 kb on - strand, within B158DRAFT_1645at 1716.002 kb on - strand, within B158DRAFT_1645at 1716.002 kb on - strand, within B158DRAFT_1645at 1716.154 kb on - strandat 1716.322 kb on + strandat 1716.340 kb on - strand, within B158DRAFT_1646at 1716.398 kb on - strand, within B158DRAFT_1646at 1716.425 kb on - strand, within B158DRAFT_1646at 1716.439 kb on + strand, within B158DRAFT_1646at 1716.439 kb on + strand, within B158DRAFT_1646at 1716.439 kb on + strand, within B158DRAFT_1646at 1716.439 kb on + strand, within B158DRAFT_1646at 1716.439 kb on + strand, within B158DRAFT_1646at 1716.439 kb on + strand, within B158DRAFT_1646at 1716.439 kb on + strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.447 kb on - strand, within B158DRAFT_1646at 1716.496 kb on + strand, within B158DRAFT_1646at 1716.496 kb on + strand, within B158DRAFT_1646at 1716.496 kb on + strand, within B158DRAFT_1646at 1716.535 kb on - strand, within B158DRAFT_1646at 1716.669 kb on + strandat 1716.669 kb on + strandat 1716.669 kb on + strandat 1716.669 kb on + strandat 1716.669 kb on + strandat 1716.677 kb on - strandat 1716.688 kb on + strandat 1716.704 kb on - strand, within B158DRAFT_1647at 1716.714 kb on - strand, within B158DRAFT_1647at 1716.940 kb on + strand, within B158DRAFT_1647at 1716.948 kb on - strand, within B158DRAFT_1647at 1716.953 kb on - strand, within B158DRAFT_1647at 1717.074 kb on - strand, within B158DRAFT_1647at 1717.099 kb on + strand, within B158DRAFT_1647at 1717.102 kb on - strand, within B158DRAFT_1647at 1717.138 kb on - strand, within B158DRAFT_1647at 1717.143 kb on + strand, within B158DRAFT_1647at 1717.151 kb on - strand, within B158DRAFT_1647at 1717.151 kb on - strand, within B158DRAFT_1647at 1717.249 kb on - strandat 1717.256 kb on + strandat 1717.875 kb on + strand, within B158DRAFT_1648at 1717.875 kb on - strand, within B158DRAFT_1648at 1717.891 kb on + strand, within B158DRAFT_1648at 1717.959 kb on - strandat 1717.973 kb on + strandat 1717.991 kb on + strandat 1718.015 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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1,715,708 - B158DRAFT_1645 0.47 -0.2
1,715,737 + B158DRAFT_1645 0.50 -0.3
1,715,781 + B158DRAFT_1645 0.55 +0.9
1,715,811 + B158DRAFT_1645 0.59 -0.4
1,715,861 + B158DRAFT_1645 0.64 +0.1
1,715,869 - B158DRAFT_1645 0.65 -1.8
1,715,869 - B158DRAFT_1645 0.65 +0.1
1,715,879 - B158DRAFT_1645 0.67 -0.7
1,715,891 + B158DRAFT_1645 0.68 -0.0
1,715,906 + B158DRAFT_1645 0.70 -0.8
1,715,932 - B158DRAFT_1645 0.73 -2.1
1,715,994 + B158DRAFT_1645 0.80 -0.1
1,715,994 + B158DRAFT_1645 0.80 +0.1
1,715,994 + B158DRAFT_1645 0.80 -0.3
1,715,994 + B158DRAFT_1645 0.80 -0.7
1,715,994 + B158DRAFT_1645 0.80 +0.6
1,715,999 + B158DRAFT_1645 0.81 -0.3
1,716,002 - B158DRAFT_1645 0.81 -0.5
1,716,002 - B158DRAFT_1645 0.81 -0.4
1,716,002 - B158DRAFT_1645 0.81 +0.4
1,716,002 - B158DRAFT_1645 0.81 -0.4
1,716,002 - B158DRAFT_1645 0.81 +0.7
1,716,002 - B158DRAFT_1645 0.81 -1.4
1,716,154 - -0.0
1,716,322 + +0.0
1,716,340 - B158DRAFT_1646 0.15 -0.1
1,716,398 - B158DRAFT_1646 0.32 +1.2
1,716,425 - B158DRAFT_1646 0.40 +0.5
1,716,439 + B158DRAFT_1646 0.44 +0.0
1,716,439 + B158DRAFT_1646 0.44 +0.2
1,716,439 + B158DRAFT_1646 0.44 -0.2
1,716,439 + B158DRAFT_1646 0.44 +0.4
1,716,439 + B158DRAFT_1646 0.44 +0.3
1,716,439 + B158DRAFT_1646 0.44 +0.5
1,716,439 + B158DRAFT_1646 0.44 -1.5
1,716,447 - B158DRAFT_1646 0.47 -0.6
1,716,447 - B158DRAFT_1646 0.47 +0.6
1,716,447 - B158DRAFT_1646 0.47 +1.0
1,716,447 - B158DRAFT_1646 0.47 -1.4
1,716,447 - B158DRAFT_1646 0.47 -0.6
1,716,447 - B158DRAFT_1646 0.47 +0.1
1,716,447 - B158DRAFT_1646 0.47 -1.1
1,716,447 - B158DRAFT_1646 0.47 -0.5
1,716,447 - B158DRAFT_1646 0.47 -0.7
1,716,496 + B158DRAFT_1646 0.61 +0.3
1,716,496 + B158DRAFT_1646 0.61 +0.2
1,716,496 + B158DRAFT_1646 0.61 +1.4
1,716,535 - B158DRAFT_1646 0.73 +0.1
1,716,669 + -0.3
1,716,669 + -0.5
1,716,669 + -0.7
1,716,669 + -1.1
1,716,669 + -0.2
1,716,677 - -0.3
1,716,688 + -0.8
1,716,704 - B158DRAFT_1647 0.10 +0.2
1,716,714 - B158DRAFT_1647 0.12 -0.4
1,716,940 + B158DRAFT_1647 0.52 -0.7
1,716,948 - B158DRAFT_1647 0.54 +0.1
1,716,953 - B158DRAFT_1647 0.54 -1.6
1,717,074 - B158DRAFT_1647 0.76 -0.4
1,717,099 + B158DRAFT_1647 0.80 -0.3
1,717,102 - B158DRAFT_1647 0.81 -0.3
1,717,138 - B158DRAFT_1647 0.87 +0.8
1,717,143 + B158DRAFT_1647 0.88 +1.2
1,717,151 - B158DRAFT_1647 0.90 -0.1
1,717,151 - B158DRAFT_1647 0.90 +0.5
1,717,249 - -0.8
1,717,256 + +0.0
1,717,875 + B158DRAFT_1648 0.79 +0.6
1,717,875 - B158DRAFT_1648 0.79 +0.7
1,717,891 + B158DRAFT_1648 0.81 -0.1
1,717,959 - -0.0
1,717,973 + +0.9
1,717,991 + +0.8
1,718,015 + -0.4

Or see this region's nucleotide sequence