Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0945

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0944 and B158DRAFT_0945 are separated by 214 nucleotidesB158DRAFT_0945 and B158DRAFT_0946 are separated by 33 nucleotidesB158DRAFT_0946 and B158DRAFT_0947 are separated by 305 nucleotides B158DRAFT_0944: B158DRAFT_0944 - Uncharacterized protein involved in response to NO, at 972,817 to 974,094 _0944 B158DRAFT_0945: B158DRAFT_0945 - Uncharacterized protein conserved in bacteria, at 974,309 to 974,725 _0945 B158DRAFT_0946: B158DRAFT_0946 - transcriptional regulator, BadM/Rrf2 family, at 974,759 to 975,205 _0946 B158DRAFT_0947: B158DRAFT_0947 - transcriptional regulator, TetR family, at 975,511 to 976,119 _0947 Position (kb) 974 975Strain fitness (log2 ratio) -2 -1 0 1at 973.363 kb on + strand, within B158DRAFT_0944at 973.381 kb on - strand, within B158DRAFT_0944at 973.394 kb on + strand, within B158DRAFT_0944at 973.396 kb on - strand, within B158DRAFT_0944at 973.406 kb on + strand, within B158DRAFT_0944at 973.406 kb on + strand, within B158DRAFT_0944at 973.411 kb on + strand, within B158DRAFT_0944at 973.414 kb on - strand, within B158DRAFT_0944at 973.421 kb on + strand, within B158DRAFT_0944at 973.429 kb on - strand, within B158DRAFT_0944at 973.450 kb on + strand, within B158DRAFT_0944at 973.478 kb on - strand, within B158DRAFT_0944at 973.488 kb on + strand, within B158DRAFT_0944at 973.490 kb on + strand, within B158DRAFT_0944at 973.604 kb on - strand, within B158DRAFT_0944at 973.610 kb on + strand, within B158DRAFT_0944at 973.610 kb on + strand, within B158DRAFT_0944at 973.618 kb on - strand, within B158DRAFT_0944at 973.639 kb on + strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.715 kb on - strand, within B158DRAFT_0944at 973.732 kb on + strand, within B158DRAFT_0944at 973.735 kb on - strand, within B158DRAFT_0944at 973.755 kb on + strand, within B158DRAFT_0944at 973.755 kb on + strand, within B158DRAFT_0944at 973.762 kb on + strand, within B158DRAFT_0944at 973.762 kb on + strand, within B158DRAFT_0944at 973.765 kb on - strand, within B158DRAFT_0944at 973.785 kb on + strand, within B158DRAFT_0944at 973.785 kb on + strand, within B158DRAFT_0944at 973.788 kb on - strand, within B158DRAFT_0944at 973.793 kb on - strand, within B158DRAFT_0944at 973.793 kb on - strand, within B158DRAFT_0944at 973.823 kb on - strand, within B158DRAFT_0944at 973.837 kb on + strand, within B158DRAFT_0944at 973.840 kb on - strand, within B158DRAFT_0944at 973.857 kb on + strand, within B158DRAFT_0944at 973.857 kb on + strand, within B158DRAFT_0944at 973.857 kb on + strand, within B158DRAFT_0944at 973.864 kb on + strand, within B158DRAFT_0944at 973.864 kb on + strand, within B158DRAFT_0944at 973.887 kb on + strand, within B158DRAFT_0944at 973.895 kb on - strand, within B158DRAFT_0944at 973.949 kb on + strand, within B158DRAFT_0944at 973.949 kb on + strand, within B158DRAFT_0944at 973.971 kb on - strandat 974.048 kb on + strandat 974.048 kb on + strandat 974.053 kb on + strandat 974.056 kb on - strandat 974.056 kb on - strandat 974.061 kb on - strandat 974.341 kb on + strandat 974.420 kb on - strand, within B158DRAFT_0945at 974.468 kb on - strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.481 kb on - strand, within B158DRAFT_0945at 974.517 kb on - strand, within B158DRAFT_0945at 974.545 kb on + strand, within B158DRAFT_0945at 974.590 kb on + strand, within B158DRAFT_0945at 974.600 kb on + strand, within B158DRAFT_0945at 974.600 kb on + strand, within B158DRAFT_0945at 974.608 kb on - strand, within B158DRAFT_0945at 974.665 kb on - strand, within B158DRAFT_0945at 974.721 kb on - strandat 974.721 kb on - strandat 974.725 kb on + strandat 974.728 kb on + strandat 974.753 kb on + strandat 974.827 kb on + strand, within B158DRAFT_0946at 974.889 kb on - strand, within B158DRAFT_0946at 975.078 kb on + strand, within B158DRAFT_0946at 975.134 kb on - strand, within B158DRAFT_0946at 975.134 kb on - strand, within B158DRAFT_0946at 975.137 kb on + strand, within B158DRAFT_0946at 975.154 kb on + strand, within B158DRAFT_0946at 975.207 kb on - strandat 975.231 kb on + strandat 975.239 kb on - strandat 975.239 kb on - strandat 975.239 kb on - strandat 975.239 kb on - strandat 975.241 kb on + strandat 975.260 kb on - strandat 975.289 kb on + strandat 975.342 kb on + strandat 975.549 kb on - strandat 975.604 kb on + strand, within B158DRAFT_0947at 975.606 kb on + strand, within B158DRAFT_0947at 975.606 kb on + strand, within B158DRAFT_0947at 975.646 kb on - strand, within B158DRAFT_0947at 975.646 kb on - strand, within B158DRAFT_0947at 975.697 kb on + strand, within B158DRAFT_0947

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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973,363 + B158DRAFT_0944 0.43 +0.1
973,381 - B158DRAFT_0944 0.44 -0.1
973,394 + B158DRAFT_0944 0.45 -0.7
973,396 - B158DRAFT_0944 0.45 -0.4
973,406 + B158DRAFT_0944 0.46 +1.4
973,406 + B158DRAFT_0944 0.46 -0.1
973,411 + B158DRAFT_0944 0.46 -0.4
973,414 - B158DRAFT_0944 0.47 -0.2
973,421 + B158DRAFT_0944 0.47 -1.8
973,429 - B158DRAFT_0944 0.48 -0.4
973,450 + B158DRAFT_0944 0.50 -1.1
973,478 - B158DRAFT_0944 0.52 -0.8
973,488 + B158DRAFT_0944 0.53 +0.0
973,490 + B158DRAFT_0944 0.53 -0.1
973,604 - B158DRAFT_0944 0.62 -0.6
973,610 + B158DRAFT_0944 0.62 -0.3
973,610 + B158DRAFT_0944 0.62 +0.4
973,618 - B158DRAFT_0944 0.63 -0.8
973,639 + B158DRAFT_0944 0.64 -0.0
973,647 - B158DRAFT_0944 0.65 +0.2
973,647 - B158DRAFT_0944 0.65 -0.3
973,647 - B158DRAFT_0944 0.65 +0.8
973,647 - B158DRAFT_0944 0.65 +1.2
973,715 - B158DRAFT_0944 0.70 +0.0
973,732 + B158DRAFT_0944 0.72 -0.9
973,735 - B158DRAFT_0944 0.72 +0.1
973,755 + B158DRAFT_0944 0.73 -1.0
973,755 + B158DRAFT_0944 0.73 -0.1
973,762 + B158DRAFT_0944 0.74 -2.4
973,762 + B158DRAFT_0944 0.74 -0.0
973,765 - B158DRAFT_0944 0.74 -0.5
973,785 + B158DRAFT_0944 0.76 +0.1
973,785 + B158DRAFT_0944 0.76 -0.5
973,788 - B158DRAFT_0944 0.76 +0.2
973,793 - B158DRAFT_0944 0.76 -0.4
973,793 - B158DRAFT_0944 0.76 +1.2
973,823 - B158DRAFT_0944 0.79 +0.1
973,837 + B158DRAFT_0944 0.80 +0.3
973,840 - B158DRAFT_0944 0.80 +1.3
973,857 + B158DRAFT_0944 0.81 +0.2
973,857 + B158DRAFT_0944 0.81 +0.7
973,857 + B158DRAFT_0944 0.81 -0.4
973,864 + B158DRAFT_0944 0.82 +1.5
973,864 + B158DRAFT_0944 0.82 -0.5
973,887 + B158DRAFT_0944 0.84 -0.5
973,895 - B158DRAFT_0944 0.84 +0.7
973,949 + B158DRAFT_0944 0.89 -0.4
973,949 + B158DRAFT_0944 0.89 -1.1
973,971 - -0.5
974,048 + -0.4
974,048 + +0.8
974,053 + -0.7
974,056 - -0.3
974,056 - +0.4
974,061 - -0.3
974,341 + -0.3
974,420 - B158DRAFT_0945 0.27 +1.0
974,468 - B158DRAFT_0945 0.38 -0.3
974,473 + B158DRAFT_0945 0.39 +0.3
974,473 + B158DRAFT_0945 0.39 +0.2
974,473 + B158DRAFT_0945 0.39 -1.1
974,473 + B158DRAFT_0945 0.39 -2.1
974,473 + B158DRAFT_0945 0.39 -1.1
974,481 - B158DRAFT_0945 0.41 -0.0
974,517 - B158DRAFT_0945 0.50 -0.8
974,545 + B158DRAFT_0945 0.57 +0.6
974,590 + B158DRAFT_0945 0.67 -1.1
974,600 + B158DRAFT_0945 0.70 +0.6
974,600 + B158DRAFT_0945 0.70 +0.2
974,608 - B158DRAFT_0945 0.72 +1.3
974,665 - B158DRAFT_0945 0.85 -0.3
974,721 - +0.3
974,721 - +0.4
974,725 + +0.9
974,728 + -0.6
974,753 + -0.1
974,827 + B158DRAFT_0946 0.15 +0.8
974,889 - B158DRAFT_0946 0.29 +0.4
975,078 + B158DRAFT_0946 0.71 +0.9
975,134 - B158DRAFT_0946 0.84 +0.3
975,134 - B158DRAFT_0946 0.84 +1.1
975,137 + B158DRAFT_0946 0.85 -0.2
975,154 + B158DRAFT_0946 0.88 -1.2
975,207 - -0.2
975,231 + +0.1
975,239 - +0.2
975,239 - +0.7
975,239 - -1.0
975,239 - +1.2
975,241 + +0.7
975,260 - -1.9
975,289 + -1.0
975,342 + -0.9
975,549 - +0.2
975,604 + B158DRAFT_0947 0.15 -0.9
975,606 + B158DRAFT_0947 0.16 -2.0
975,606 + B158DRAFT_0947 0.16 +0.6
975,646 - B158DRAFT_0947 0.22 +0.1
975,646 - B158DRAFT_0947 0.22 -0.3
975,697 + B158DRAFT_0947 0.31 -0.5

Or see this region's nucleotide sequence