Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0944

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0942 and B158DRAFT_0943 are separated by 2 nucleotidesB158DRAFT_0943 and B158DRAFT_0944 overlap by 14 nucleotidesB158DRAFT_0944 and B158DRAFT_0945 are separated by 214 nucleotidesB158DRAFT_0945 and B158DRAFT_0946 are separated by 33 nucleotides B158DRAFT_0942: B158DRAFT_0942 - Nitric oxide reductase large subunit, at 969,859 to 972,138 _0942 B158DRAFT_0943: B158DRAFT_0943 - iron-sulfur cluster repair di-iron protein, at 972,141 to 972,830 _0943 B158DRAFT_0944: B158DRAFT_0944 - Uncharacterized protein involved in response to NO, at 972,817 to 974,094 _0944 B158DRAFT_0945: B158DRAFT_0945 - Uncharacterized protein conserved in bacteria, at 974,309 to 974,725 _0945 B158DRAFT_0946: B158DRAFT_0946 - transcriptional regulator, BadM/Rrf2 family, at 974,759 to 975,205 _0946 Position (kb) 972 973 974 975Strain fitness (log2 ratio) -3 -2 -1 0 1at 971.883 kb on + strand, within B158DRAFT_0942at 971.888 kb on - strand, within B158DRAFT_0942at 971.901 kb on - strand, within B158DRAFT_0942at 972.054 kb on - strandat 972.060 kb on - strandat 972.108 kb on + strandat 972.108 kb on + strandat 972.108 kb on + strandat 972.108 kb on + strandat 972.149 kb on + strandat 972.240 kb on + strand, within B158DRAFT_0943at 972.240 kb on + strand, within B158DRAFT_0943at 972.240 kb on + strand, within B158DRAFT_0943at 972.240 kb on + strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.334 kb on - strand, within B158DRAFT_0943at 972.340 kb on + strand, within B158DRAFT_0943at 972.470 kb on + strand, within B158DRAFT_0943at 972.528 kb on + strand, within B158DRAFT_0943at 972.560 kb on + strand, within B158DRAFT_0943at 972.708 kb on + strand, within B158DRAFT_0943at 972.708 kb on + strand, within B158DRAFT_0943at 972.708 kb on + strand, within B158DRAFT_0943at 972.716 kb on - strand, within B158DRAFT_0943at 972.716 kb on - strand, within B158DRAFT_0943at 972.747 kb on + strand, within B158DRAFT_0943at 972.755 kb on - strand, within B158DRAFT_0943at 972.824 kb on - strandat 972.832 kb on + strandat 972.850 kb on - strandat 972.858 kb on + strandat 972.975 kb on + strand, within B158DRAFT_0944at 973.006 kb on - strand, within B158DRAFT_0944at 973.024 kb on + strand, within B158DRAFT_0944at 973.034 kb on + strand, within B158DRAFT_0944at 973.034 kb on + strand, within B158DRAFT_0944at 973.087 kb on + strand, within B158DRAFT_0944at 973.096 kb on - strand, within B158DRAFT_0944at 973.197 kb on + strand, within B158DRAFT_0944at 973.222 kb on + strand, within B158DRAFT_0944at 973.250 kb on - strand, within B158DRAFT_0944at 973.252 kb on - strand, within B158DRAFT_0944at 973.294 kb on - strand, within B158DRAFT_0944at 973.363 kb on + strand, within B158DRAFT_0944at 973.381 kb on - strand, within B158DRAFT_0944at 973.394 kb on + strand, within B158DRAFT_0944at 973.396 kb on - strand, within B158DRAFT_0944at 973.406 kb on + strand, within B158DRAFT_0944at 973.406 kb on + strand, within B158DRAFT_0944at 973.411 kb on + strand, within B158DRAFT_0944at 973.414 kb on - strand, within B158DRAFT_0944at 973.421 kb on + strand, within B158DRAFT_0944at 973.429 kb on - strand, within B158DRAFT_0944at 973.450 kb on + strand, within B158DRAFT_0944at 973.478 kb on - strand, within B158DRAFT_0944at 973.488 kb on + strand, within B158DRAFT_0944at 973.490 kb on + strand, within B158DRAFT_0944at 973.604 kb on - strand, within B158DRAFT_0944at 973.610 kb on + strand, within B158DRAFT_0944at 973.610 kb on + strand, within B158DRAFT_0944at 973.618 kb on - strand, within B158DRAFT_0944at 973.639 kb on + strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.647 kb on - strand, within B158DRAFT_0944at 973.715 kb on - strand, within B158DRAFT_0944at 973.732 kb on + strand, within B158DRAFT_0944at 973.735 kb on - strand, within B158DRAFT_0944at 973.755 kb on + strand, within B158DRAFT_0944at 973.755 kb on + strand, within B158DRAFT_0944at 973.762 kb on + strand, within B158DRAFT_0944at 973.762 kb on + strand, within B158DRAFT_0944at 973.765 kb on - strand, within B158DRAFT_0944at 973.785 kb on + strand, within B158DRAFT_0944at 973.785 kb on + strand, within B158DRAFT_0944at 973.788 kb on - strand, within B158DRAFT_0944at 973.793 kb on - strand, within B158DRAFT_0944at 973.793 kb on - strand, within B158DRAFT_0944at 973.823 kb on - strand, within B158DRAFT_0944at 973.837 kb on + strand, within B158DRAFT_0944at 973.840 kb on - strand, within B158DRAFT_0944at 973.857 kb on + strand, within B158DRAFT_0944at 973.857 kb on + strand, within B158DRAFT_0944at 973.857 kb on + strand, within B158DRAFT_0944at 973.864 kb on + strand, within B158DRAFT_0944at 973.864 kb on + strand, within B158DRAFT_0944at 973.887 kb on + strand, within B158DRAFT_0944at 973.895 kb on - strand, within B158DRAFT_0944at 973.949 kb on + strand, within B158DRAFT_0944at 973.949 kb on + strand, within B158DRAFT_0944at 973.971 kb on - strandat 974.048 kb on + strandat 974.048 kb on + strandat 974.053 kb on + strandat 974.056 kb on - strandat 974.056 kb on - strandat 974.061 kb on - strandat 974.341 kb on + strandat 974.420 kb on - strand, within B158DRAFT_0945at 974.468 kb on - strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.473 kb on + strand, within B158DRAFT_0945at 974.481 kb on - strand, within B158DRAFT_0945at 974.517 kb on - strand, within B158DRAFT_0945at 974.545 kb on + strand, within B158DRAFT_0945at 974.590 kb on + strand, within B158DRAFT_0945at 974.600 kb on + strand, within B158DRAFT_0945at 974.600 kb on + strand, within B158DRAFT_0945at 974.608 kb on - strand, within B158DRAFT_0945at 974.665 kb on - strand, within B158DRAFT_0945at 974.721 kb on - strandat 974.721 kb on - strandat 974.725 kb on + strandat 974.728 kb on + strandat 974.753 kb on + strandat 974.827 kb on + strand, within B158DRAFT_0946at 974.889 kb on - strand, within B158DRAFT_0946at 975.078 kb on + strand, within B158DRAFT_0946

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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971,883 + B158DRAFT_0942 0.89 -1.6
971,888 - B158DRAFT_0942 0.89 -0.4
971,901 - B158DRAFT_0942 0.90 +0.9
972,054 - +0.6
972,060 - -0.7
972,108 + -0.1
972,108 + -0.2
972,108 + +0.7
972,108 + -1.0
972,149 + +0.6
972,240 + B158DRAFT_0943 0.14 -0.5
972,240 + B158DRAFT_0943 0.14 +0.0
972,240 + B158DRAFT_0943 0.14 +0.5
972,240 + B158DRAFT_0943 0.14 +0.1
972,248 - B158DRAFT_0943 0.16 -0.2
972,248 - B158DRAFT_0943 0.16 -0.5
972,248 - B158DRAFT_0943 0.16 -0.3
972,248 - B158DRAFT_0943 0.16 +0.4
972,334 - B158DRAFT_0943 0.28 -0.3
972,340 + B158DRAFT_0943 0.29 +0.3
972,470 + B158DRAFT_0943 0.48 -0.2
972,528 + B158DRAFT_0943 0.56 +0.2
972,560 + B158DRAFT_0943 0.61 -0.0
972,708 + B158DRAFT_0943 0.82 -0.4
972,708 + B158DRAFT_0943 0.82 +0.5
972,708 + B158DRAFT_0943 0.82 +0.0
972,716 - B158DRAFT_0943 0.83 -0.0
972,716 - B158DRAFT_0943 0.83 +0.4
972,747 + B158DRAFT_0943 0.88 -0.0
972,755 - B158DRAFT_0943 0.89 -0.1
972,824 - -0.4
972,832 + -0.3
972,850 - -0.6
972,858 + +1.4
972,975 + B158DRAFT_0944 0.12 +0.1
973,006 - B158DRAFT_0944 0.15 -0.1
973,024 + B158DRAFT_0944 0.16 -0.3
973,034 + B158DRAFT_0944 0.17 -0.9
973,034 + B158DRAFT_0944 0.17 -0.1
973,087 + B158DRAFT_0944 0.21 -0.9
973,096 - B158DRAFT_0944 0.22 +0.0
973,197 + B158DRAFT_0944 0.30 -0.6
973,222 + B158DRAFT_0944 0.32 +0.3
973,250 - B158DRAFT_0944 0.34 +0.1
973,252 - B158DRAFT_0944 0.34 -2.9
973,294 - B158DRAFT_0944 0.37 +0.4
973,363 + B158DRAFT_0944 0.43 +0.1
973,381 - B158DRAFT_0944 0.44 -0.1
973,394 + B158DRAFT_0944 0.45 -0.7
973,396 - B158DRAFT_0944 0.45 -0.4
973,406 + B158DRAFT_0944 0.46 +1.4
973,406 + B158DRAFT_0944 0.46 -0.1
973,411 + B158DRAFT_0944 0.46 -0.4
973,414 - B158DRAFT_0944 0.47 -0.2
973,421 + B158DRAFT_0944 0.47 -1.8
973,429 - B158DRAFT_0944 0.48 -0.4
973,450 + B158DRAFT_0944 0.50 -1.1
973,478 - B158DRAFT_0944 0.52 -0.8
973,488 + B158DRAFT_0944 0.53 +0.0
973,490 + B158DRAFT_0944 0.53 -0.1
973,604 - B158DRAFT_0944 0.62 -0.6
973,610 + B158DRAFT_0944 0.62 -0.3
973,610 + B158DRAFT_0944 0.62 +0.4
973,618 - B158DRAFT_0944 0.63 -0.8
973,639 + B158DRAFT_0944 0.64 -0.0
973,647 - B158DRAFT_0944 0.65 +0.2
973,647 - B158DRAFT_0944 0.65 -0.3
973,647 - B158DRAFT_0944 0.65 +0.8
973,647 - B158DRAFT_0944 0.65 +1.2
973,715 - B158DRAFT_0944 0.70 +0.0
973,732 + B158DRAFT_0944 0.72 -0.9
973,735 - B158DRAFT_0944 0.72 +0.1
973,755 + B158DRAFT_0944 0.73 -1.0
973,755 + B158DRAFT_0944 0.73 -0.1
973,762 + B158DRAFT_0944 0.74 -2.4
973,762 + B158DRAFT_0944 0.74 -0.0
973,765 - B158DRAFT_0944 0.74 -0.5
973,785 + B158DRAFT_0944 0.76 +0.1
973,785 + B158DRAFT_0944 0.76 -0.5
973,788 - B158DRAFT_0944 0.76 +0.2
973,793 - B158DRAFT_0944 0.76 -0.4
973,793 - B158DRAFT_0944 0.76 +1.2
973,823 - B158DRAFT_0944 0.79 +0.1
973,837 + B158DRAFT_0944 0.80 +0.3
973,840 - B158DRAFT_0944 0.80 +1.3
973,857 + B158DRAFT_0944 0.81 +0.2
973,857 + B158DRAFT_0944 0.81 +0.7
973,857 + B158DRAFT_0944 0.81 -0.4
973,864 + B158DRAFT_0944 0.82 +1.5
973,864 + B158DRAFT_0944 0.82 -0.5
973,887 + B158DRAFT_0944 0.84 -0.5
973,895 - B158DRAFT_0944 0.84 +0.7
973,949 + B158DRAFT_0944 0.89 -0.4
973,949 + B158DRAFT_0944 0.89 -1.1
973,971 - -0.5
974,048 + -0.4
974,048 + +0.8
974,053 + -0.7
974,056 - -0.3
974,056 - +0.4
974,061 - -0.3
974,341 + -0.3
974,420 - B158DRAFT_0945 0.27 +1.0
974,468 - B158DRAFT_0945 0.38 -0.3
974,473 + B158DRAFT_0945 0.39 +0.3
974,473 + B158DRAFT_0945 0.39 +0.2
974,473 + B158DRAFT_0945 0.39 -1.1
974,473 + B158DRAFT_0945 0.39 -2.1
974,473 + B158DRAFT_0945 0.39 -1.1
974,481 - B158DRAFT_0945 0.41 -0.0
974,517 - B158DRAFT_0945 0.50 -0.8
974,545 + B158DRAFT_0945 0.57 +0.6
974,590 + B158DRAFT_0945 0.67 -1.1
974,600 + B158DRAFT_0945 0.70 +0.6
974,600 + B158DRAFT_0945 0.70 +0.2
974,608 - B158DRAFT_0945 0.72 +1.3
974,665 - B158DRAFT_0945 0.85 -0.3
974,721 - +0.3
974,721 - +0.4
974,725 + +0.9
974,728 + -0.6
974,753 + -0.1
974,827 + B158DRAFT_0946 0.15 +0.8
974,889 - B158DRAFT_0946 0.29 +0.4
975,078 + B158DRAFT_0946 0.71 +0.9

Or see this region's nucleotide sequence