Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0942

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0940 and B158DRAFT_0941 are separated by 8 nucleotidesB158DRAFT_0941 and B158DRAFT_0942 are separated by 97 nucleotidesB158DRAFT_0942 and B158DRAFT_0943 are separated by 2 nucleotidesB158DRAFT_0943 and B158DRAFT_0944 overlap by 14 nucleotides B158DRAFT_0940: B158DRAFT_0940 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 967,792 to 968,916 _0940 B158DRAFT_0941: B158DRAFT_0941 - S-formylglutathione hydrolase, at 968,925 to 969,761 _0941 B158DRAFT_0942: B158DRAFT_0942 - Nitric oxide reductase large subunit, at 969,859 to 972,138 _0942 B158DRAFT_0943: B158DRAFT_0943 - iron-sulfur cluster repair di-iron protein, at 972,141 to 972,830 _0943 B158DRAFT_0944: B158DRAFT_0944 - Uncharacterized protein involved in response to NO, at 972,817 to 974,094 _0944 Position (kb) 969 970 971 972 973Strain fitness (log2 ratio) -2 -1 0 1 2at 968.884 kb on + strandat 968.923 kb on + strandat 969.089 kb on + strand, within B158DRAFT_0941at 969.089 kb on + strand, within B158DRAFT_0941at 969.089 kb on + strand, within B158DRAFT_0941at 969.089 kb on + strand, within B158DRAFT_0941at 969.097 kb on - strand, within B158DRAFT_0941at 969.097 kb on - strand, within B158DRAFT_0941at 969.097 kb on - strand, within B158DRAFT_0941at 969.119 kb on + strand, within B158DRAFT_0941at 969.152 kb on - strand, within B158DRAFT_0941at 969.221 kb on + strand, within B158DRAFT_0941at 969.371 kb on - strand, within B158DRAFT_0941at 969.507 kb on - strand, within B158DRAFT_0941at 969.507 kb on - strand, within B158DRAFT_0941at 969.522 kb on + strand, within B158DRAFT_0941at 969.530 kb on - strand, within B158DRAFT_0941at 969.607 kb on - strand, within B158DRAFT_0941at 969.614 kb on + strand, within B158DRAFT_0941at 969.614 kb on + strand, within B158DRAFT_0941at 969.614 kb on + strand, within B158DRAFT_0941at 969.622 kb on - strand, within B158DRAFT_0941at 969.622 kb on - strand, within B158DRAFT_0941at 969.690 kb on + strandat 969.745 kb on - strandat 969.796 kb on + strandat 969.814 kb on - strandat 969.877 kb on - strandat 969.898 kb on + strandat 969.921 kb on - strandat 969.938 kb on - strandat 969.938 kb on - strandat 969.980 kb on + strandat 969.988 kb on - strandat 969.996 kb on + strandat 970.000 kb on + strandat 970.006 kb on - strandat 970.026 kb on - strandat 970.042 kb on + strandat 970.080 kb on + strandat 970.083 kb on - strandat 970.109 kb on + strand, within B158DRAFT_0942at 970.109 kb on + strand, within B158DRAFT_0942at 970.114 kb on + strand, within B158DRAFT_0942at 970.117 kb on - strand, within B158DRAFT_0942at 970.119 kb on + strand, within B158DRAFT_0942at 970.122 kb on - strand, within B158DRAFT_0942at 970.127 kb on - strand, within B158DRAFT_0942at 970.237 kb on + strand, within B158DRAFT_0942at 970.237 kb on + strand, within B158DRAFT_0942at 970.237 kb on + strand, within B158DRAFT_0942at 970.245 kb on - strand, within B158DRAFT_0942at 970.245 kb on - strand, within B158DRAFT_0942at 970.265 kb on - strand, within B158DRAFT_0942at 970.269 kb on + strand, within B158DRAFT_0942at 970.277 kb on - strand, within B158DRAFT_0942at 970.279 kb on - strand, within B158DRAFT_0942at 970.296 kb on - strand, within B158DRAFT_0942at 970.377 kb on - strand, within B158DRAFT_0942at 970.393 kb on + strand, within B158DRAFT_0942at 970.393 kb on + strand, within B158DRAFT_0942at 970.401 kb on - strand, within B158DRAFT_0942at 970.434 kb on + strand, within B158DRAFT_0942at 970.459 kb on - strand, within B158DRAFT_0942at 970.546 kb on - strand, within B158DRAFT_0942at 970.558 kb on - strand, within B158DRAFT_0942at 970.614 kb on + strand, within B158DRAFT_0942at 970.614 kb on + strand, within B158DRAFT_0942at 970.617 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.624 kb on + strand, within B158DRAFT_0942at 970.659 kb on - strand, within B158DRAFT_0942at 970.669 kb on + strand, within B158DRAFT_0942at 970.669 kb on + strand, within B158DRAFT_0942at 970.676 kb on + strand, within B158DRAFT_0942at 970.684 kb on - strand, within B158DRAFT_0942at 970.689 kb on - strand, within B158DRAFT_0942at 970.728 kb on - strand, within B158DRAFT_0942at 970.741 kb on + strand, within B158DRAFT_0942at 970.749 kb on - strand, within B158DRAFT_0942at 970.754 kb on - strand, within B158DRAFT_0942at 970.754 kb on - strand, within B158DRAFT_0942at 970.754 kb on - strand, within B158DRAFT_0942at 970.846 kb on - strand, within B158DRAFT_0942at 970.901 kb on - strand, within B158DRAFT_0942at 970.901 kb on - strand, within B158DRAFT_0942at 970.903 kb on + strand, within B158DRAFT_0942at 970.911 kb on - strand, within B158DRAFT_0942at 970.911 kb on - strand, within B158DRAFT_0942at 970.916 kb on - strand, within B158DRAFT_0942at 970.918 kb on + strand, within B158DRAFT_0942at 970.926 kb on - strand, within B158DRAFT_0942at 970.966 kb on - strand, within B158DRAFT_0942at 970.989 kb on - strand, within B158DRAFT_0942at 971.016 kb on + strand, within B158DRAFT_0942at 971.016 kb on + strand, within B158DRAFT_0942at 971.021 kb on + strand, within B158DRAFT_0942at 971.021 kb on + strand, within B158DRAFT_0942at 971.029 kb on - strand, within B158DRAFT_0942at 971.065 kb on + strand, within B158DRAFT_0942at 971.092 kb on + strand, within B158DRAFT_0942at 971.092 kb on + strand, within B158DRAFT_0942at 971.092 kb on + strand, within B158DRAFT_0942at 971.092 kb on + strand, within B158DRAFT_0942at 971.092 kb on + strand, within B158DRAFT_0942at 971.100 kb on - strand, within B158DRAFT_0942at 971.118 kb on + strand, within B158DRAFT_0942at 971.123 kb on + strand, within B158DRAFT_0942at 971.131 kb on - strand, within B158DRAFT_0942at 971.138 kb on + strand, within B158DRAFT_0942at 971.157 kb on + strand, within B158DRAFT_0942at 971.165 kb on + strand, within B158DRAFT_0942at 971.176 kb on + strand, within B158DRAFT_0942at 971.178 kb on + strand, within B158DRAFT_0942at 971.178 kb on + strand, within B158DRAFT_0942at 971.178 kb on + strand, within B158DRAFT_0942at 971.186 kb on - strand, within B158DRAFT_0942at 971.203 kb on + strand, within B158DRAFT_0942at 971.211 kb on - strand, within B158DRAFT_0942at 971.211 kb on - strand, within B158DRAFT_0942at 971.211 kb on - strand, within B158DRAFT_0942at 971.211 kb on - strand, within B158DRAFT_0942at 971.219 kb on + strand, within B158DRAFT_0942at 971.219 kb on - strand, within B158DRAFT_0942at 971.221 kb on + strand, within B158DRAFT_0942at 971.229 kb on - strand, within B158DRAFT_0942at 971.229 kb on - strand, within B158DRAFT_0942at 971.229 kb on - strand, within B158DRAFT_0942at 971.229 kb on - strand, within B158DRAFT_0942at 971.236 kb on - strand, within B158DRAFT_0942at 971.292 kb on - strand, within B158DRAFT_0942at 971.379 kb on + strand, within B158DRAFT_0942at 971.389 kb on + strand, within B158DRAFT_0942at 971.444 kb on - strand, within B158DRAFT_0942at 971.484 kb on - strand, within B158DRAFT_0942at 971.508 kb on + strand, within B158DRAFT_0942at 971.510 kb on - strand, within B158DRAFT_0942at 971.552 kb on + strand, within B158DRAFT_0942at 971.552 kb on + strand, within B158DRAFT_0942at 971.560 kb on - strand, within B158DRAFT_0942at 971.678 kb on + strand, within B158DRAFT_0942at 971.686 kb on - strand, within B158DRAFT_0942at 971.720 kb on - strand, within B158DRAFT_0942at 971.747 kb on + strand, within B158DRAFT_0942at 971.755 kb on - strand, within B158DRAFT_0942at 971.766 kb on + strand, within B158DRAFT_0942at 971.766 kb on + strand, within B158DRAFT_0942at 971.808 kb on + strand, within B158DRAFT_0942at 971.809 kb on - strand, within B158DRAFT_0942at 971.816 kb on - strand, within B158DRAFT_0942at 971.883 kb on + strand, within B158DRAFT_0942at 971.888 kb on - strand, within B158DRAFT_0942at 971.901 kb on - strand, within B158DRAFT_0942at 972.054 kb on - strandat 972.060 kb on - strandat 972.108 kb on + strandat 972.108 kb on + strandat 972.108 kb on + strandat 972.108 kb on + strandat 972.149 kb on + strandat 972.240 kb on + strand, within B158DRAFT_0943at 972.240 kb on + strand, within B158DRAFT_0943at 972.240 kb on + strand, within B158DRAFT_0943at 972.240 kb on + strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.248 kb on - strand, within B158DRAFT_0943at 972.334 kb on - strand, within B158DRAFT_0943at 972.340 kb on + strand, within B158DRAFT_0943at 972.470 kb on + strand, within B158DRAFT_0943at 972.528 kb on + strand, within B158DRAFT_0943at 972.560 kb on + strand, within B158DRAFT_0943at 972.708 kb on + strand, within B158DRAFT_0943at 972.708 kb on + strand, within B158DRAFT_0943at 972.708 kb on + strand, within B158DRAFT_0943at 972.716 kb on - strand, within B158DRAFT_0943at 972.716 kb on - strand, within B158DRAFT_0943at 972.747 kb on + strand, within B158DRAFT_0943at 972.755 kb on - strand, within B158DRAFT_0943at 972.824 kb on - strandat 972.832 kb on + strandat 972.850 kb on - strandat 972.858 kb on + strandat 972.975 kb on + strand, within B158DRAFT_0944at 973.006 kb on - strand, within B158DRAFT_0944at 973.024 kb on + strand, within B158DRAFT_0944at 973.034 kb on + strand, within B158DRAFT_0944at 973.034 kb on + strand, within B158DRAFT_0944at 973.087 kb on + strand, within B158DRAFT_0944at 973.096 kb on - strand, within B158DRAFT_0944

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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968,884 + -0.7
968,923 + +0.1
969,089 + B158DRAFT_0941 0.20 +0.2
969,089 + B158DRAFT_0941 0.20 -0.8
969,089 + B158DRAFT_0941 0.20 +0.2
969,089 + B158DRAFT_0941 0.20 +0.3
969,097 - B158DRAFT_0941 0.21 +0.3
969,097 - B158DRAFT_0941 0.21 -0.7
969,097 - B158DRAFT_0941 0.21 -0.4
969,119 + B158DRAFT_0941 0.23 +0.2
969,152 - B158DRAFT_0941 0.27 -1.7
969,221 + B158DRAFT_0941 0.35 +0.2
969,371 - B158DRAFT_0941 0.53 -1.2
969,507 - B158DRAFT_0941 0.70 -1.0
969,507 - B158DRAFT_0941 0.70 -0.6
969,522 + B158DRAFT_0941 0.71 -0.5
969,530 - B158DRAFT_0941 0.72 -1.3
969,607 - B158DRAFT_0941 0.81 -2.1
969,614 + B158DRAFT_0941 0.82 +1.5
969,614 + B158DRAFT_0941 0.82 -0.6
969,614 + B158DRAFT_0941 0.82 -0.4
969,622 - B158DRAFT_0941 0.83 -0.7
969,622 - B158DRAFT_0941 0.83 -0.5
969,690 + -0.2
969,745 - -0.2
969,796 + -0.6
969,814 - -0.4
969,877 - -0.8
969,898 + +0.3
969,921 - +0.4
969,938 - -0.4
969,938 - -0.6
969,980 + -0.2
969,988 - -0.3
969,996 + +1.7
970,000 + -1.5
970,006 - +0.9
970,026 - +0.3
970,042 + -0.2
970,080 + -0.0
970,083 - -0.4
970,109 + B158DRAFT_0942 0.11 -0.3
970,109 + B158DRAFT_0942 0.11 -0.6
970,114 + B158DRAFT_0942 0.11 -0.8
970,117 - B158DRAFT_0942 0.11 -0.5
970,119 + B158DRAFT_0942 0.11 -0.2
970,122 - B158DRAFT_0942 0.12 -0.4
970,127 - B158DRAFT_0942 0.12 +0.3
970,237 + B158DRAFT_0942 0.17 +0.5
970,237 + B158DRAFT_0942 0.17 -0.7
970,237 + B158DRAFT_0942 0.17 -0.2
970,245 - B158DRAFT_0942 0.17 +0.0
970,245 - B158DRAFT_0942 0.17 -0.4
970,265 - B158DRAFT_0942 0.18 -0.9
970,269 + B158DRAFT_0942 0.18 -0.0
970,277 - B158DRAFT_0942 0.18 -2.5
970,279 - B158DRAFT_0942 0.18 -0.7
970,296 - B158DRAFT_0942 0.19 +0.0
970,377 - B158DRAFT_0942 0.23 +0.1
970,393 + B158DRAFT_0942 0.23 +0.1
970,393 + B158DRAFT_0942 0.23 +0.2
970,401 - B158DRAFT_0942 0.24 +0.3
970,434 + B158DRAFT_0942 0.25 +0.3
970,459 - B158DRAFT_0942 0.26 -1.5
970,546 - B158DRAFT_0942 0.30 -1.8
970,558 - B158DRAFT_0942 0.31 -1.1
970,614 + B158DRAFT_0942 0.33 -0.4
970,614 + B158DRAFT_0942 0.33 +0.4
970,617 - B158DRAFT_0942 0.33 +0.2
970,622 - B158DRAFT_0942 0.33 +0.2
970,622 - B158DRAFT_0942 0.33 +0.5
970,622 - B158DRAFT_0942 0.33 +0.1
970,622 - B158DRAFT_0942 0.33 -0.4
970,622 - B158DRAFT_0942 0.33 -0.7
970,624 + B158DRAFT_0942 0.34 -0.6
970,659 - B158DRAFT_0942 0.35 +1.6
970,669 + B158DRAFT_0942 0.36 -0.2
970,669 + B158DRAFT_0942 0.36 -0.2
970,676 + B158DRAFT_0942 0.36 +0.3
970,684 - B158DRAFT_0942 0.36 +0.8
970,689 - B158DRAFT_0942 0.36 +2.6
970,728 - B158DRAFT_0942 0.38 -0.1
970,741 + B158DRAFT_0942 0.39 -0.3
970,749 - B158DRAFT_0942 0.39 +0.4
970,754 - B158DRAFT_0942 0.39 -1.7
970,754 - B158DRAFT_0942 0.39 -0.8
970,754 - B158DRAFT_0942 0.39 +0.2
970,846 - B158DRAFT_0942 0.43 +0.1
970,901 - B158DRAFT_0942 0.46 +0.6
970,901 - B158DRAFT_0942 0.46 +0.7
970,903 + B158DRAFT_0942 0.46 +0.0
970,911 - B158DRAFT_0942 0.46 -0.4
970,911 - B158DRAFT_0942 0.46 -0.1
970,916 - B158DRAFT_0942 0.46 -0.8
970,918 + B158DRAFT_0942 0.46 -0.1
970,926 - B158DRAFT_0942 0.47 -1.2
970,966 - B158DRAFT_0942 0.49 -0.7
970,989 - B158DRAFT_0942 0.50 -0.9
971,016 + B158DRAFT_0942 0.51 -0.6
971,016 + B158DRAFT_0942 0.51 +0.0
971,021 + B158DRAFT_0942 0.51 -1.2
971,021 + B158DRAFT_0942 0.51 -0.5
971,029 - B158DRAFT_0942 0.51 -0.4
971,065 + B158DRAFT_0942 0.53 -0.1
971,092 + B158DRAFT_0942 0.54 -0.3
971,092 + B158DRAFT_0942 0.54 -0.8
971,092 + B158DRAFT_0942 0.54 +0.4
971,092 + B158DRAFT_0942 0.54 +0.1
971,092 + B158DRAFT_0942 0.54 +1.3
971,100 - B158DRAFT_0942 0.54 -1.1
971,118 + B158DRAFT_0942 0.55 -0.0
971,123 + B158DRAFT_0942 0.55 -0.6
971,131 - B158DRAFT_0942 0.56 -0.4
971,138 + B158DRAFT_0942 0.56 -0.5
971,157 + B158DRAFT_0942 0.57 -0.8
971,165 + B158DRAFT_0942 0.57 +0.6
971,176 + B158DRAFT_0942 0.58 +0.2
971,178 + B158DRAFT_0942 0.58 -0.1
971,178 + B158DRAFT_0942 0.58 -1.0
971,178 + B158DRAFT_0942 0.58 -0.7
971,186 - B158DRAFT_0942 0.58 -1.0
971,203 + B158DRAFT_0942 0.59 -0.5
971,211 - B158DRAFT_0942 0.59 -0.2
971,211 - B158DRAFT_0942 0.59 +0.4
971,211 - B158DRAFT_0942 0.59 -0.1
971,211 - B158DRAFT_0942 0.59 -0.3
971,219 + B158DRAFT_0942 0.60 +0.1
971,219 - B158DRAFT_0942 0.60 -0.5
971,221 + B158DRAFT_0942 0.60 -1.2
971,229 - B158DRAFT_0942 0.60 -0.4
971,229 - B158DRAFT_0942 0.60 -0.4
971,229 - B158DRAFT_0942 0.60 -0.0
971,229 - B158DRAFT_0942 0.60 +0.1
971,236 - B158DRAFT_0942 0.60 +0.1
971,292 - B158DRAFT_0942 0.63 -0.7
971,379 + B158DRAFT_0942 0.67 -0.8
971,389 + B158DRAFT_0942 0.67 -0.5
971,444 - B158DRAFT_0942 0.70 +1.7
971,484 - B158DRAFT_0942 0.71 -0.2
971,508 + B158DRAFT_0942 0.72 +0.4
971,510 - B158DRAFT_0942 0.72 -0.1
971,552 + B158DRAFT_0942 0.74 -0.4
971,552 + B158DRAFT_0942 0.74 -0.6
971,560 - B158DRAFT_0942 0.75 +0.3
971,678 + B158DRAFT_0942 0.80 -0.1
971,686 - B158DRAFT_0942 0.80 -0.2
971,720 - B158DRAFT_0942 0.82 +0.2
971,747 + B158DRAFT_0942 0.83 -1.0
971,755 - B158DRAFT_0942 0.83 -0.2
971,766 + B158DRAFT_0942 0.84 -0.3
971,766 + B158DRAFT_0942 0.84 -0.0
971,808 + B158DRAFT_0942 0.85 -0.8
971,809 - B158DRAFT_0942 0.86 -1.0
971,816 - B158DRAFT_0942 0.86 -0.2
971,883 + B158DRAFT_0942 0.89 -1.6
971,888 - B158DRAFT_0942 0.89 -0.4
971,901 - B158DRAFT_0942 0.90 +0.9
972,054 - +0.6
972,060 - -0.7
972,108 + -0.1
972,108 + -0.2
972,108 + +0.7
972,108 + -1.0
972,149 + +0.6
972,240 + B158DRAFT_0943 0.14 -0.5
972,240 + B158DRAFT_0943 0.14 +0.0
972,240 + B158DRAFT_0943 0.14 +0.5
972,240 + B158DRAFT_0943 0.14 +0.1
972,248 - B158DRAFT_0943 0.16 -0.2
972,248 - B158DRAFT_0943 0.16 -0.5
972,248 - B158DRAFT_0943 0.16 -0.3
972,248 - B158DRAFT_0943 0.16 +0.4
972,334 - B158DRAFT_0943 0.28 -0.3
972,340 + B158DRAFT_0943 0.29 +0.3
972,470 + B158DRAFT_0943 0.48 -0.2
972,528 + B158DRAFT_0943 0.56 +0.2
972,560 + B158DRAFT_0943 0.61 -0.0
972,708 + B158DRAFT_0943 0.82 -0.4
972,708 + B158DRAFT_0943 0.82 +0.5
972,708 + B158DRAFT_0943 0.82 +0.0
972,716 - B158DRAFT_0943 0.83 -0.0
972,716 - B158DRAFT_0943 0.83 +0.4
972,747 + B158DRAFT_0943 0.88 -0.0
972,755 - B158DRAFT_0943 0.89 -0.1
972,824 - -0.4
972,832 + -0.3
972,850 - -0.6
972,858 + +1.4
972,975 + B158DRAFT_0944 0.12 +0.1
973,006 - B158DRAFT_0944 0.15 -0.1
973,024 + B158DRAFT_0944 0.16 -0.3
973,034 + B158DRAFT_0944 0.17 -0.9
973,034 + B158DRAFT_0944 0.17 -0.1
973,087 + B158DRAFT_0944 0.21 -0.9
973,096 - B158DRAFT_0944 0.22 +0.0

Or see this region's nucleotide sequence