Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0619

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0617 and B158DRAFT_0618 overlap by 4 nucleotidesB158DRAFT_0618 and B158DRAFT_0619 are separated by 148 nucleotidesB158DRAFT_0619 and B158DRAFT_0620 are separated by 176 nucleotides B158DRAFT_0617: B158DRAFT_0617 - transcription elongation factor GreA, at 627,191 to 627,673 _0617 B158DRAFT_0618: B158DRAFT_0618 - Predicted transcriptional regulators, at 627,670 to 628,251 _0618 B158DRAFT_0619: B158DRAFT_0619 - hypothetical protein, at 628,400 to 628,909 _0619 B158DRAFT_0620: B158DRAFT_0620 - Uncharacterized conserved protein, at 629,086 to 630,033 _0620 Position (kb) 628 629Strain fitness (log2 ratio) -3 -2 -1 0 1at 627.464 kb on - strand, within B158DRAFT_0617at 627.632 kb on - strandat 627.667 kb on - strandat 627.904 kb on - strand, within B158DRAFT_0618at 627.910 kb on + strand, within B158DRAFT_0618at 627.958 kb on + strand, within B158DRAFT_0618at 627.984 kb on + strand, within B158DRAFT_0618at 627.984 kb on + strand, within B158DRAFT_0618at 627.992 kb on - strand, within B158DRAFT_0618at 627.992 kb on - strand, within B158DRAFT_0618at 628.065 kb on + strand, within B158DRAFT_0618at 628.087 kb on + strand, within B158DRAFT_0618at 628.123 kb on + strand, within B158DRAFT_0618at 628.133 kb on + strand, within B158DRAFT_0618at 628.135 kb on - strand, within B158DRAFT_0618at 628.198 kb on - strandat 628.506 kb on - strand, within B158DRAFT_0619at 628.673 kb on - strand, within B158DRAFT_0619at 628.675 kb on + strand, within B158DRAFT_0619at 628.937 kb on - strandat 629.029 kb on + strandat 629.037 kb on - strandat 629.037 kb on - strandat 629.037 kb on - strandat 629.179 kb on - strandat 629.192 kb on + strand, within B158DRAFT_0620at 629.230 kb on + strand, within B158DRAFT_0620at 629.238 kb on - strand, within B158DRAFT_0620at 629.252 kb on + strand, within B158DRAFT_0620at 629.317 kb on - strand, within B158DRAFT_0620at 629.420 kb on + strand, within B158DRAFT_0620at 629.421 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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627,464 - B158DRAFT_0617 0.57 -0.1
627,632 - -0.6
627,667 - -0.5
627,904 - B158DRAFT_0618 0.40 +0.0
627,910 + B158DRAFT_0618 0.41 +0.4
627,958 + B158DRAFT_0618 0.49 +0.9
627,984 + B158DRAFT_0618 0.54 -0.9
627,984 + B158DRAFT_0618 0.54 -0.8
627,992 - B158DRAFT_0618 0.55 -0.2
627,992 - B158DRAFT_0618 0.55 -0.1
628,065 + B158DRAFT_0618 0.68 -0.5
628,087 + B158DRAFT_0618 0.72 -0.1
628,123 + B158DRAFT_0618 0.78 +0.2
628,133 + B158DRAFT_0618 0.80 +1.4
628,135 - B158DRAFT_0618 0.80 -1.0
628,198 - -0.1
628,506 - B158DRAFT_0619 0.21 +0.2
628,673 - B158DRAFT_0619 0.54 +0.2
628,675 + B158DRAFT_0619 0.54 +0.4
628,937 - -0.4
629,029 + +0.4
629,037 - -0.5
629,037 - -2.8
629,037 - -0.7
629,179 - -0.5
629,192 + B158DRAFT_0620 0.11 -0.3
629,230 + B158DRAFT_0620 0.15 -0.5
629,238 - B158DRAFT_0620 0.16 -0.7
629,252 + B158DRAFT_0620 0.18 -0.3
629,317 - B158DRAFT_0620 0.24 +0.1
629,420 + B158DRAFT_0620 0.35 -0.6
629,421 + B158DRAFT_0620 0.35 -1.6
629,540 + B158DRAFT_0620 0.48 -0.5
629,540 + B158DRAFT_0620 0.48 -1.4
629,540 + B158DRAFT_0620 0.48 -0.1
629,540 + B158DRAFT_0620 0.48 +0.2
629,540 + B158DRAFT_0620 0.48 -1.1
629,548 - B158DRAFT_0620 0.49 -1.3
629,548 - B158DRAFT_0620 0.49 -0.5
629,548 - B158DRAFT_0620 0.49 +0.1
629,548 - B158DRAFT_0620 0.49 +0.1
629,548 - B158DRAFT_0620 0.49 -0.8
629,548 - B158DRAFT_0620 0.49 -1.7

Or see this region's nucleotide sequence