Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0253

Experiment: m.b. Thallium(I) acetate 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0252 and B158DRAFT_0253 are separated by 16 nucleotidesB158DRAFT_0253 and B158DRAFT_0254 are separated by 102 nucleotides B158DRAFT_0252: B158DRAFT_0252 - hydroxymethylbilane synthase (EC 2.5.1.61), at 258,093 to 259,028 _0252 B158DRAFT_0253: B158DRAFT_0253 - Uroporphyrinogen-III synthase, at 259,045 to 259,797 _0253 B158DRAFT_0254: B158DRAFT_0254 - Uncharacterized enzyme of heme biosynthesis, at 259,900 to 261,183 _0254 Position (kb) 259 260Strain fitness (log2 ratio) -2 -1 0 1 2at 259.022 kb on + strandat 259.911 kb on + strandat 259.919 kb on - strandat 259.919 kb on - strandat 260.010 kb on + strandat 260.015 kb on + strandat 260.051 kb on + strand, within B158DRAFT_0254at 260.051 kb on + strand, within B158DRAFT_0254at 260.051 kb on + strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.110 kb on + strand, within B158DRAFT_0254at 260.110 kb on + strand, within B158DRAFT_0254at 260.118 kb on - strand, within B158DRAFT_0254at 260.158 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.208 kb on - strand, within B158DRAFT_0254at 260.211 kb on + strand, within B158DRAFT_0254at 260.433 kb on - strand, within B158DRAFT_0254at 260.492 kb on + strand, within B158DRAFT_0254at 260.560 kb on + strand, within B158DRAFT_0254at 260.574 kb on + strand, within B158DRAFT_0254at 260.574 kb on + strand, within B158DRAFT_0254at 260.582 kb on - strand, within B158DRAFT_0254at 260.591 kb on + strand, within B158DRAFT_0254at 260.636 kb on + strand, within B158DRAFT_0254at 260.782 kb on - strand, within B158DRAFT_0254at 260.782 kb on - strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0078125 mg/ml
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259,022 + -0.7
259,911 + +0.4
259,919 - -0.3
259,919 - +2.1
260,010 + +0.5
260,015 + +1.7
260,051 + B158DRAFT_0254 0.12 -0.7
260,051 + B158DRAFT_0254 0.12 +0.4
260,051 + B158DRAFT_0254 0.12 +1.3
260,059 - B158DRAFT_0254 0.12 -1.2
260,059 - B158DRAFT_0254 0.12 +0.1
260,059 - B158DRAFT_0254 0.12 -0.1
260,059 - B158DRAFT_0254 0.12 -2.3
260,059 - B158DRAFT_0254 0.12 -0.8
260,110 + B158DRAFT_0254 0.16 +0.4
260,110 + B158DRAFT_0254 0.16 +1.3
260,118 - B158DRAFT_0254 0.17 -0.1
260,158 + B158DRAFT_0254 0.20 +0.3
260,200 + B158DRAFT_0254 0.23 -0.1
260,200 + B158DRAFT_0254 0.23 +0.6
260,200 + B158DRAFT_0254 0.23 -0.8
260,200 + B158DRAFT_0254 0.23 -0.5
260,200 + B158DRAFT_0254 0.23 +0.5
260,200 + B158DRAFT_0254 0.23 -1.1
260,200 + B158DRAFT_0254 0.23 +0.7
260,200 + B158DRAFT_0254 0.23 -0.3
260,200 + B158DRAFT_0254 0.23 -0.5
260,200 + B158DRAFT_0254 0.23 -0.1
260,208 - B158DRAFT_0254 0.24 -0.0
260,211 + B158DRAFT_0254 0.24 -1.2
260,433 - B158DRAFT_0254 0.42 -0.3
260,492 + B158DRAFT_0254 0.46 +1.2
260,560 + B158DRAFT_0254 0.51 -0.1
260,574 + B158DRAFT_0254 0.52 -0.6
260,574 + B158DRAFT_0254 0.52 -0.6
260,582 - B158DRAFT_0254 0.53 -1.0
260,591 + B158DRAFT_0254 0.54 +0.2
260,636 + B158DRAFT_0254 0.57 +0.2
260,782 - B158DRAFT_0254 0.69 -0.7
260,782 - B158DRAFT_0254 0.69 -0.1
260,790 + B158DRAFT_0254 0.69 -0.2
260,790 + B158DRAFT_0254 0.69 -0.5
260,790 + B158DRAFT_0254 0.69 +0.6
260,790 + B158DRAFT_0254 0.69 -0.3
260,790 + B158DRAFT_0254 0.69 +0.4
260,790 + B158DRAFT_0254 0.69 +0.1
260,790 + B158DRAFT_0254 0.69 +0.0

Or see this region's nucleotide sequence