Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2372

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2370 and B158DRAFT_2371 are separated by 8 nucleotidesB158DRAFT_2371 and B158DRAFT_2372 are separated by 329 nucleotidesB158DRAFT_2372 and B158DRAFT_2373 are separated by 304 nucleotidesB158DRAFT_2373 and B158DRAFT_2374 overlap by 31 nucleotides B158DRAFT_2370: B158DRAFT_2370 - electron transport complex, RnfABCDGE type, B subunit, at 541,742 to 542,329 _2370 B158DRAFT_2371: B158DRAFT_2371 - electron transport complex, RnfABCDGE type, A subunit, at 542,338 to 542,919 _2371 B158DRAFT_2372: B158DRAFT_2372 - Transposase and inactivated derivatives, at 543,249 to 543,785 _2372 B158DRAFT_2373: B158DRAFT_2373 - Putative lipid carrier protein, at 544,090 to 544,662 _2373 B158DRAFT_2374: B158DRAFT_2374 - Collagenase and related proteases, at 544,632 to 545,513 _2374 Position (kb) 543 544Strain fitness (log2 ratio) -2 -1 0 1at 542.343 kb on - strandat 543.074 kb on - strandat 543.095 kb on + strandat 543.103 kb on - strandat 543.103 kb on - strandat 543.134 kb on + strandat 543.144 kb on + strandat 543.152 kb on - strandat 543.166 kb on + strandat 543.169 kb on - strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.171 kb on + strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.179 kb on - strandat 543.265 kb on + strandat 543.265 kb on + strandat 543.266 kb on + strandat 543.266 kb on + strandat 543.266 kb on + strandat 543.266 kb on + strandat 543.266 kb on + strandat 543.274 kb on - strandat 543.274 kb on - strandat 543.274 kb on - strandat 543.274 kb on - strandat 543.274 kb on - strandat 543.274 kb on - strandat 543.321 kb on + strand, within B158DRAFT_2372at 543.413 kb on + strand, within B158DRAFT_2372at 543.421 kb on - strand, within B158DRAFT_2372at 543.501 kb on - strand, within B158DRAFT_2372at 543.501 kb on - strand, within B158DRAFT_2372at 543.503 kb on + strand, within B158DRAFT_2372at 543.503 kb on + strand, within B158DRAFT_2372at 543.503 kb on + strand, within B158DRAFT_2372at 543.503 kb on + strand, within B158DRAFT_2372at 543.506 kb on - strand, within B158DRAFT_2372at 543.506 kb on - strand, within B158DRAFT_2372at 543.510 kb on + strand, within B158DRAFT_2372at 543.511 kb on - strand, within B158DRAFT_2372at 543.536 kb on + strand, within B158DRAFT_2372at 543.536 kb on + strand, within B158DRAFT_2372at 543.644 kb on + strand, within B158DRAFT_2372at 543.644 kb on + strand, within B158DRAFT_2372at 543.652 kb on - strand, within B158DRAFT_2372at 543.659 kb on - strand, within B158DRAFT_2372at 543.662 kb on - strand, within B158DRAFT_2372at 543.665 kb on + strand, within B158DRAFT_2372at 543.665 kb on + strand, within B158DRAFT_2372at 543.673 kb on - strand, within B158DRAFT_2372at 543.723 kb on + strand, within B158DRAFT_2372at 543.730 kb on + strand, within B158DRAFT_2372at 543.736 kb on - strandat 543.745 kb on - strandat 543.747 kb on + strandat 543.755 kb on - strandat 543.895 kb on - strandat 543.976 kb on - strandat 544.027 kb on - strandat 544.052 kb on + strandat 544.105 kb on - strandat 544.122 kb on - strandat 544.177 kb on - strand, within B158DRAFT_2373at 544.203 kb on - strand, within B158DRAFT_2373at 544.216 kb on - strand, within B158DRAFT_2373at 544.261 kb on - strand, within B158DRAFT_2373at 544.261 kb on - strand, within B158DRAFT_2373at 544.273 kb on + strand, within B158DRAFT_2373at 544.273 kb on + strand, within B158DRAFT_2373at 544.273 kb on + strand, within B158DRAFT_2373at 544.273 kb on + strand, within B158DRAFT_2373at 544.273 kb on + strand, within B158DRAFT_2373at 544.273 kb on + strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.281 kb on - strand, within B158DRAFT_2373at 544.336 kb on + strand, within B158DRAFT_2373at 544.355 kb on + strand, within B158DRAFT_2373at 544.530 kb on - strand, within B158DRAFT_2373at 544.658 kb on + strandat 544.665 kb on + strandat 544.690 kb on - strandat 544.704 kb on + strandat 544.731 kb on + strand, within B158DRAFT_2374at 544.731 kb on + strand, within B158DRAFT_2374at 544.744 kb on - strand, within B158DRAFT_2374

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
remove
542,343 - -1.6
543,074 - -0.1
543,095 + -0.3
543,103 - -0.5
543,103 - -0.1
543,134 + -0.4
543,144 + -0.2
543,152 - -0.2
543,166 + +0.8
543,169 - +0.1
543,171 + +0.5
543,171 + -0.2
543,171 + +0.1
543,171 + -0.2
543,171 + -1.2
543,171 + -0.8
543,171 + -0.6
543,171 + -0.2
543,171 + -0.1
543,171 + -0.4
543,171 + +0.4
543,171 + -0.4
543,171 + -0.4
543,171 + -0.0
543,171 + -0.5
543,171 + -1.0
543,171 + -2.7
543,171 + +0.1
543,171 + +0.2
543,171 + -0.6
543,171 + -0.5
543,171 + -0.5
543,171 + +0.1
543,171 + +0.0
543,171 + -0.5
543,171 + +1.7
543,171 + +0.1
543,179 - -0.1
543,179 - -0.5
543,179 - +1.4
543,179 - -0.4
543,179 - -0.3
543,179 - -0.3
543,179 - -0.5
543,179 - -0.2
543,179 - +0.2
543,179 - -1.0
543,179 - -0.7
543,179 - -0.6
543,179 - +0.5
543,179 - -0.2
543,179 - -1.0
543,179 - -0.3
543,179 - +0.1
543,179 - -0.1
543,179 - -0.6
543,179 - -1.2
543,179 - -0.7
543,179 - +0.2
543,179 - -1.3
543,265 + -2.3
543,265 + -0.3
543,266 + -0.6
543,266 + +0.0
543,266 + -0.3
543,266 + +0.6
543,266 + -0.1
543,274 - -0.8
543,274 - +1.1
543,274 - -1.5
543,274 - -0.2
543,274 - -0.1
543,274 - -0.2
543,321 + B158DRAFT_2372 0.13 -0.4
543,413 + B158DRAFT_2372 0.31 +0.3
543,421 - B158DRAFT_2372 0.32 -2.1
543,501 - B158DRAFT_2372 0.47 +0.0
543,501 - B158DRAFT_2372 0.47 -1.6
543,503 + B158DRAFT_2372 0.47 +0.5
543,503 + B158DRAFT_2372 0.47 +0.4
543,503 + B158DRAFT_2372 0.47 -1.0
543,503 + B158DRAFT_2372 0.47 +1.5
543,506 - B158DRAFT_2372 0.48 -0.3
543,506 - B158DRAFT_2372 0.48 -0.1
543,510 + B158DRAFT_2372 0.49 +0.7
543,511 - B158DRAFT_2372 0.49 -0.1
543,536 + B158DRAFT_2372 0.53 -0.5
543,536 + B158DRAFT_2372 0.53 -0.8
543,644 + B158DRAFT_2372 0.74 +0.4
543,644 + B158DRAFT_2372 0.74 -0.4
543,652 - B158DRAFT_2372 0.75 -0.7
543,659 - B158DRAFT_2372 0.76 +1.2
543,662 - B158DRAFT_2372 0.77 -0.4
543,665 + B158DRAFT_2372 0.77 -0.9
543,665 + B158DRAFT_2372 0.77 +0.0
543,673 - B158DRAFT_2372 0.79 -1.7
543,723 + B158DRAFT_2372 0.88 +0.4
543,730 + B158DRAFT_2372 0.90 -0.1
543,736 - -0.7
543,745 - -0.2
543,747 + +0.1
543,755 - -0.4
543,895 - -0.4
543,976 - +0.0
544,027 - -0.1
544,052 + -0.4
544,105 - -1.5
544,122 - -0.7
544,177 - B158DRAFT_2373 0.15 -1.0
544,203 - B158DRAFT_2373 0.20 -0.7
544,216 - B158DRAFT_2373 0.22 -0.3
544,261 - B158DRAFT_2373 0.30 -1.0
544,261 - B158DRAFT_2373 0.30 +0.4
544,273 + B158DRAFT_2373 0.32 -1.1
544,273 + B158DRAFT_2373 0.32 +0.3
544,273 + B158DRAFT_2373 0.32 +0.3
544,273 + B158DRAFT_2373 0.32 -0.5
544,273 + B158DRAFT_2373 0.32 -0.6
544,273 + B158DRAFT_2373 0.32 -0.8
544,281 - B158DRAFT_2373 0.33 +0.0
544,281 - B158DRAFT_2373 0.33 -0.1
544,281 - B158DRAFT_2373 0.33 +1.5
544,281 - B158DRAFT_2373 0.33 -0.4
544,281 - B158DRAFT_2373 0.33 -0.7
544,281 - B158DRAFT_2373 0.33 -1.1
544,281 - B158DRAFT_2373 0.33 +0.0
544,281 - B158DRAFT_2373 0.33 +0.2
544,281 - B158DRAFT_2373 0.33 +0.5
544,336 + B158DRAFT_2373 0.43 -0.3
544,355 + B158DRAFT_2373 0.46 -0.5
544,530 - B158DRAFT_2373 0.77 -0.5
544,658 + +0.2
544,665 + -1.1
544,690 - -0.8
544,704 + -1.2
544,731 + B158DRAFT_2374 0.11 +0.2
544,731 + B158DRAFT_2374 0.11 +0.5
544,744 - B158DRAFT_2374 0.13 -1.2

Or see this region's nucleotide sequence