Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2253

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2252 and B158DRAFT_2253 overlap by 1 nucleotidesB158DRAFT_2253 and B158DRAFT_2254 are separated by 129 nucleotides B158DRAFT_2252: B158DRAFT_2252 - sodium/proline symporter, at 414,588 to 416,177 _2252 B158DRAFT_2253: B158DRAFT_2253 - Acetyltransferases, at 416,177 to 416,659 _2253 B158DRAFT_2254: B158DRAFT_2254 - formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-), at 416,789 to 417,970 _2254 Position (kb) 416 417Strain fitness (log2 ratio) -2 -1 0 1 2at 415.216 kb on + strand, within B158DRAFT_2252at 415.237 kb on + strand, within B158DRAFT_2252at 415.297 kb on + strand, within B158DRAFT_2252at 415.298 kb on - strand, within B158DRAFT_2252at 415.305 kb on - strand, within B158DRAFT_2252at 415.338 kb on - strand, within B158DRAFT_2252at 415.362 kb on + strand, within B158DRAFT_2252at 415.370 kb on - strand, within B158DRAFT_2252at 415.376 kb on - strand, within B158DRAFT_2252at 415.376 kb on - strand, within B158DRAFT_2252at 415.381 kb on - strand, within B158DRAFT_2252at 415.414 kb on - strand, within B158DRAFT_2252at 415.414 kb on - strand, within B158DRAFT_2252at 415.455 kb on + strand, within B158DRAFT_2252at 415.455 kb on + strand, within B158DRAFT_2252at 415.463 kb on - strand, within B158DRAFT_2252at 415.463 kb on - strand, within B158DRAFT_2252at 415.463 kb on - strand, within B158DRAFT_2252at 415.481 kb on + strand, within B158DRAFT_2252at 415.487 kb on - strand, within B158DRAFT_2252at 415.540 kb on - strand, within B158DRAFT_2252at 415.580 kb on + strand, within B158DRAFT_2252at 415.632 kb on - strand, within B158DRAFT_2252at 415.701 kb on - strand, within B158DRAFT_2252at 415.716 kb on + strand, within B158DRAFT_2252at 415.716 kb on + strand, within B158DRAFT_2252at 415.724 kb on - strand, within B158DRAFT_2252at 415.749 kb on + strand, within B158DRAFT_2252at 415.749 kb on + strand, within B158DRAFT_2252at 415.749 kb on + strand, within B158DRAFT_2252at 415.757 kb on - strand, within B158DRAFT_2252at 415.868 kb on - strand, within B158DRAFT_2252at 415.875 kb on + strand, within B158DRAFT_2252at 415.880 kb on + strand, within B158DRAFT_2252at 415.880 kb on + strand, within B158DRAFT_2252at 415.888 kb on - strand, within B158DRAFT_2252at 415.907 kb on - strand, within B158DRAFT_2252at 415.940 kb on + strand, within B158DRAFT_2252at 415.940 kb on + strand, within B158DRAFT_2252at 416.000 kb on - strand, within B158DRAFT_2252at 416.005 kb on - strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.016 kb on - strand, within B158DRAFT_2252at 416.016 kb on - strand, within B158DRAFT_2252at 416.021 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.295 kb on + strand, within B158DRAFT_2253at 416.300 kb on + strand, within B158DRAFT_2253at 416.378 kb on - strand, within B158DRAFT_2253at 416.491 kb on - strand, within B158DRAFT_2253at 416.516 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.545 kb on + strand, within B158DRAFT_2253at 416.586 kb on + strand, within B158DRAFT_2253at 416.594 kb on - strand, within B158DRAFT_2253at 416.653 kb on + strandat 416.719 kb on + strandat 416.740 kb on + strandat 416.847 kb on - strandat 416.862 kb on + strandat 416.862 kb on + strandat 416.877 kb on + strandat 416.884 kb on - strandat 416.892 kb on + strandat 416.894 kb on - strandat 417.087 kb on + strand, within B158DRAFT_2254at 417.134 kb on + strand, within B158DRAFT_2254at 417.158 kb on + strand, within B158DRAFT_2254at 417.199 kb on - strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.229 kb on - strand, within B158DRAFT_2254at 417.229 kb on - strand, within B158DRAFT_2254at 417.233 kb on + strand, within B158DRAFT_2254at 417.256 kb on + strand, within B158DRAFT_2254at 417.272 kb on + strand, within B158DRAFT_2254at 417.278 kb on + strand, within B158DRAFT_2254at 417.289 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.356 kb on + strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.368 kb on + strand, within B158DRAFT_2254at 417.376 kb on - strand, within B158DRAFT_2254at 417.376 kb on - strand, within B158DRAFT_2254at 417.434 kb on - strand, within B158DRAFT_2254at 417.444 kb on - strand, within B158DRAFT_2254at 417.460 kb on - strand, within B158DRAFT_2254at 417.483 kb on + strand, within B158DRAFT_2254at 417.483 kb on + strand, within B158DRAFT_2254at 417.535 kb on - strand, within B158DRAFT_2254at 417.545 kb on + strand, within B158DRAFT_2254at 417.552 kb on + strand, within B158DRAFT_2254at 417.650 kb on + strand, within B158DRAFT_2254

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
remove
415,216 + B158DRAFT_2252 0.39 +0.1
415,237 + B158DRAFT_2252 0.41 -0.6
415,297 + B158DRAFT_2252 0.45 +0.5
415,298 - B158DRAFT_2252 0.45 -0.4
415,305 - B158DRAFT_2252 0.45 -1.9
415,338 - B158DRAFT_2252 0.47 -0.2
415,362 + B158DRAFT_2252 0.49 +0.6
415,370 - B158DRAFT_2252 0.49 -0.3
415,376 - B158DRAFT_2252 0.50 +0.1
415,376 - B158DRAFT_2252 0.50 +2.2
415,381 - B158DRAFT_2252 0.50 -1.2
415,414 - B158DRAFT_2252 0.52 -0.3
415,414 - B158DRAFT_2252 0.52 -0.2
415,455 + B158DRAFT_2252 0.55 -0.7
415,455 + B158DRAFT_2252 0.55 +1.0
415,463 - B158DRAFT_2252 0.55 -0.7
415,463 - B158DRAFT_2252 0.55 -0.0
415,463 - B158DRAFT_2252 0.55 -1.0
415,481 + B158DRAFT_2252 0.56 -0.2
415,487 - B158DRAFT_2252 0.57 +0.1
415,540 - B158DRAFT_2252 0.60 +0.4
415,580 + B158DRAFT_2252 0.62 +0.4
415,632 - B158DRAFT_2252 0.66 -1.0
415,701 - B158DRAFT_2252 0.70 -0.8
415,716 + B158DRAFT_2252 0.71 +0.5
415,716 + B158DRAFT_2252 0.71 +0.3
415,724 - B158DRAFT_2252 0.71 -0.1
415,749 + B158DRAFT_2252 0.73 +0.5
415,749 + B158DRAFT_2252 0.73 -0.2
415,749 + B158DRAFT_2252 0.73 -0.1
415,757 - B158DRAFT_2252 0.74 -1.5
415,868 - B158DRAFT_2252 0.81 -0.3
415,875 + B158DRAFT_2252 0.81 -0.8
415,880 + B158DRAFT_2252 0.81 -0.8
415,880 + B158DRAFT_2252 0.81 -0.4
415,888 - B158DRAFT_2252 0.82 -0.2
415,907 - B158DRAFT_2252 0.83 -0.5
415,940 + B158DRAFT_2252 0.85 -1.3
415,940 + B158DRAFT_2252 0.85 -0.2
416,000 - B158DRAFT_2252 0.89 -1.0
416,005 - B158DRAFT_2252 0.89 -0.2
416,008 + B158DRAFT_2252 0.89 -0.5
416,008 + B158DRAFT_2252 0.89 -0.3
416,008 + B158DRAFT_2252 0.89 -0.6
416,016 - B158DRAFT_2252 0.90 +0.1
416,016 - B158DRAFT_2252 0.90 -1.0
416,021 - -1.5
416,070 - -0.9
416,070 - -0.7
416,070 - -1.0
416,070 - -0.0
416,070 - -0.5
416,070 - -0.1
416,295 + B158DRAFT_2253 0.24 -0.1
416,300 + B158DRAFT_2253 0.25 -0.0
416,378 - B158DRAFT_2253 0.42 -0.6
416,491 - B158DRAFT_2253 0.65 +0.8
416,516 + B158DRAFT_2253 0.70 +0.2
416,540 + B158DRAFT_2253 0.75 -0.1
416,540 + B158DRAFT_2253 0.75 +0.6
416,540 + B158DRAFT_2253 0.75 +0.7
416,545 + B158DRAFT_2253 0.76 -0.1
416,586 + B158DRAFT_2253 0.85 +0.1
416,594 - B158DRAFT_2253 0.86 -0.1
416,653 + -0.7
416,719 + +0.5
416,740 + +0.3
416,847 - -0.1
416,862 + +0.3
416,862 + -0.8
416,877 + -1.0
416,884 - -1.3
416,892 + -0.0
416,894 - +0.7
417,087 + B158DRAFT_2254 0.25 -1.2
417,134 + B158DRAFT_2254 0.29 -0.2
417,158 + B158DRAFT_2254 0.31 -0.3
417,199 - B158DRAFT_2254 0.35 -0.5
417,221 + B158DRAFT_2254 0.37 +1.1
417,221 + B158DRAFT_2254 0.37 -1.3
417,221 + B158DRAFT_2254 0.37 -1.0
417,221 + B158DRAFT_2254 0.37 -0.3
417,229 - B158DRAFT_2254 0.37 +0.2
417,229 - B158DRAFT_2254 0.37 -0.5
417,233 + B158DRAFT_2254 0.38 -0.3
417,256 + B158DRAFT_2254 0.40 -0.9
417,272 + B158DRAFT_2254 0.41 -1.8
417,278 + B158DRAFT_2254 0.41 +0.9
417,289 + B158DRAFT_2254 0.42 +0.4
417,350 + B158DRAFT_2254 0.47 -1.5
417,350 + B158DRAFT_2254 0.47 +0.7
417,350 + B158DRAFT_2254 0.47 -0.0
417,350 + B158DRAFT_2254 0.47 -0.4
417,356 + B158DRAFT_2254 0.48 -0.4
417,358 - B158DRAFT_2254 0.48 -0.2
417,358 - B158DRAFT_2254 0.48 +0.7
417,358 - B158DRAFT_2254 0.48 -0.1
417,358 - B158DRAFT_2254 0.48 -0.4
417,358 - B158DRAFT_2254 0.48 -1.4
417,358 - B158DRAFT_2254 0.48 -1.7
417,358 - B158DRAFT_2254 0.48 +0.6
417,358 - B158DRAFT_2254 0.48 +0.1
417,358 - B158DRAFT_2254 0.48 +0.5
417,368 + B158DRAFT_2254 0.49 -0.4
417,376 - B158DRAFT_2254 0.50 -0.7
417,376 - B158DRAFT_2254 0.50 -0.6
417,434 - B158DRAFT_2254 0.55 -0.2
417,444 - B158DRAFT_2254 0.55 -0.2
417,460 - B158DRAFT_2254 0.57 -1.0
417,483 + B158DRAFT_2254 0.59 -0.1
417,483 + B158DRAFT_2254 0.59 +0.3
417,535 - B158DRAFT_2254 0.63 -1.4
417,545 + B158DRAFT_2254 0.64 -0.2
417,552 + B158DRAFT_2254 0.65 +0.2
417,650 + B158DRAFT_2254 0.73 +1.7

Or see this region's nucleotide sequence