Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2184

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2183 and B158DRAFT_2184 are separated by 179 nucleotidesB158DRAFT_2184 and B158DRAFT_2185 are separated by 15 nucleotidesB158DRAFT_2185 and B158DRAFT_2186 are separated by 74 nucleotides B158DRAFT_2183: B158DRAFT_2183 - periplasmic serine protease, Do/DeqQ family, at 329,837 to 331,138 _2183 B158DRAFT_2184: B158DRAFT_2184 - GTP-binding protein LepA, at 331,318 to 333,126 _2184 B158DRAFT_2185: B158DRAFT_2185 - signal peptidase I, bacterial type, at 333,142 to 334,008 _2185 B158DRAFT_2186: B158DRAFT_2186 - hypothetical protein, at 334,083 to 334,448 _2186 Position (kb) 331 332 333 334Strain fitness (log2 ratio) -2 -1 0 1 2at 330.393 kb on - strand, within B158DRAFT_2183at 330.395 kb on + strand, within B158DRAFT_2183at 330.413 kb on - strand, within B158DRAFT_2183at 330.413 kb on - strand, within B158DRAFT_2183at 330.532 kb on + strand, within B158DRAFT_2183at 330.546 kb on + strand, within B158DRAFT_2183at 330.555 kb on - strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.585 kb on - strand, within B158DRAFT_2183at 330.590 kb on - strand, within B158DRAFT_2183at 330.635 kb on - strand, within B158DRAFT_2183at 330.662 kb on + strand, within B158DRAFT_2183at 330.662 kb on + strand, within B158DRAFT_2183at 330.663 kb on + strand, within B158DRAFT_2183at 330.663 kb on + strand, within B158DRAFT_2183at 330.670 kb on + strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.697 kb on + strand, within B158DRAFT_2183at 330.705 kb on - strand, within B158DRAFT_2183at 330.705 kb on - strand, within B158DRAFT_2183at 330.716 kb on + strand, within B158DRAFT_2183at 330.716 kb on + strand, within B158DRAFT_2183at 330.721 kb on + strand, within B158DRAFT_2183at 330.724 kb on - strand, within B158DRAFT_2183at 330.729 kb on - strand, within B158DRAFT_2183at 330.812 kb on + strand, within B158DRAFT_2183at 330.854 kb on + strand, within B158DRAFT_2183at 330.854 kb on + strand, within B158DRAFT_2183at 330.862 kb on - strand, within B158DRAFT_2183at 330.919 kb on + strand, within B158DRAFT_2183at 330.927 kb on + strand, within B158DRAFT_2183at 330.950 kb on + strand, within B158DRAFT_2183at 331.034 kb on - strandat 331.092 kb on - strandat 331.093 kb on - strandat 331.099 kb on + strandat 331.102 kb on - strandat 331.107 kb on - strandat 331.107 kb on - strandat 331.133 kb on + strandat 331.141 kb on - strandat 331.167 kb on + strandat 331.167 kb on + strandat 331.167 kb on + strandat 331.172 kb on + strandat 331.175 kb on - strandat 331.175 kb on - strandat 331.243 kb on + strandat 331.297 kb on + strandat 331.297 kb on + strandat 331.313 kb on + strandat 331.315 kb on + strandat 331.320 kb on + strandat 331.333 kb on - strandat 331.404 kb on + strandat 331.414 kb on + strandat 331.459 kb on + strandat 331.469 kb on - strandat 331.497 kb on + strandat 331.499 kb on + strand, within B158DRAFT_2184at 331.499 kb on + strand, within B158DRAFT_2184at 331.504 kb on + strand, within B158DRAFT_2184at 331.507 kb on - strand, within B158DRAFT_2184at 331.540 kb on + strand, within B158DRAFT_2184at 331.559 kb on + strand, within B158DRAFT_2184at 331.559 kb on + strand, within B158DRAFT_2184at 331.654 kb on + strand, within B158DRAFT_2184at 331.741 kb on + strand, within B158DRAFT_2184at 331.801 kb on + strand, within B158DRAFT_2184at 331.801 kb on + strand, within B158DRAFT_2184at 331.801 kb on + strand, within B158DRAFT_2184at 331.872 kb on + strand, within B158DRAFT_2184at 331.872 kb on + strand, within B158DRAFT_2184at 331.894 kb on + strand, within B158DRAFT_2184at 331.894 kb on + strand, within B158DRAFT_2184at 332.118 kb on + strand, within B158DRAFT_2184at 332.124 kb on + strand, within B158DRAFT_2184at 332.134 kb on + strand, within B158DRAFT_2184at 332.142 kb on + strand, within B158DRAFT_2184at 332.196 kb on + strand, within B158DRAFT_2184at 332.196 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.213 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.273 kb on + strand, within B158DRAFT_2184at 332.313 kb on + strand, within B158DRAFT_2184at 332.313 kb on + strand, within B158DRAFT_2184at 332.386 kb on + strand, within B158DRAFT_2184at 332.461 kb on + strand, within B158DRAFT_2184at 332.593 kb on + strand, within B158DRAFT_2184at 332.608 kb on + strand, within B158DRAFT_2184at 332.608 kb on + strand, within B158DRAFT_2184at 332.644 kb on + strand, within B158DRAFT_2184at 332.644 kb on + strand, within B158DRAFT_2184at 332.677 kb on + strand, within B158DRAFT_2184at 332.697 kb on + strand, within B158DRAFT_2184at 332.748 kb on + strand, within B158DRAFT_2184at 332.848 kb on + strand, within B158DRAFT_2184at 332.876 kb on + strand, within B158DRAFT_2184at 332.877 kb on + strand, within B158DRAFT_2184at 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 333.008 kb on + strandat 333.008 kb on + strandat 333.989 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.107 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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330,393 - B158DRAFT_2183 0.43 -1.3
330,395 + B158DRAFT_2183 0.43 +0.9
330,413 - B158DRAFT_2183 0.44 -0.0
330,413 - B158DRAFT_2183 0.44 +0.1
330,532 + B158DRAFT_2183 0.53 +0.1
330,546 + B158DRAFT_2183 0.54 -1.6
330,555 - B158DRAFT_2183 0.55 -0.9
330,572 + B158DRAFT_2183 0.56 -0.1
330,572 + B158DRAFT_2183 0.56 +0.9
330,572 + B158DRAFT_2183 0.56 +0.2
330,577 + B158DRAFT_2183 0.57 +1.0
330,577 + B158DRAFT_2183 0.57 -0.5
330,577 + B158DRAFT_2183 0.57 -0.2
330,577 + B158DRAFT_2183 0.57 -1.7
330,580 - B158DRAFT_2183 0.57 -0.1
330,580 - B158DRAFT_2183 0.57 +0.3
330,580 - B158DRAFT_2183 0.57 -0.5
330,580 - B158DRAFT_2183 0.57 -0.6
330,585 - B158DRAFT_2183 0.57 +0.6
330,590 - B158DRAFT_2183 0.58 -0.9
330,635 - B158DRAFT_2183 0.61 +0.1
330,662 + B158DRAFT_2183 0.63 -1.4
330,662 + B158DRAFT_2183 0.63 -2.1
330,663 + B158DRAFT_2183 0.63 -0.2
330,663 + B158DRAFT_2183 0.63 +0.5
330,670 + B158DRAFT_2183 0.64 -0.1
330,671 - B158DRAFT_2183 0.64 -0.5
330,671 - B158DRAFT_2183 0.64 -0.2
330,671 - B158DRAFT_2183 0.64 -0.2
330,697 + B158DRAFT_2183 0.66 -0.6
330,697 + B158DRAFT_2183 0.66 -0.1
330,697 + B158DRAFT_2183 0.66 -0.9
330,697 + B158DRAFT_2183 0.66 -0.1
330,697 + B158DRAFT_2183 0.66 -0.3
330,697 + B158DRAFT_2183 0.66 +0.0
330,705 - B158DRAFT_2183 0.67 -0.2
330,705 - B158DRAFT_2183 0.67 -0.4
330,716 + B158DRAFT_2183 0.68 +2.5
330,716 + B158DRAFT_2183 0.68 -1.4
330,721 + B158DRAFT_2183 0.68 -0.5
330,724 - B158DRAFT_2183 0.68 -0.1
330,729 - B158DRAFT_2183 0.69 -1.0
330,812 + B158DRAFT_2183 0.75 +1.4
330,854 + B158DRAFT_2183 0.78 +0.9
330,854 + B158DRAFT_2183 0.78 -0.8
330,862 - B158DRAFT_2183 0.79 -0.3
330,919 + B158DRAFT_2183 0.83 +0.6
330,927 + B158DRAFT_2183 0.84 +0.8
330,950 + B158DRAFT_2183 0.85 -0.2
331,034 - +0.1
331,092 - -0.6
331,093 - +0.1
331,099 + -0.4
331,102 - -0.8
331,107 - -1.3
331,107 - -1.6
331,133 + -0.9
331,141 - -0.1
331,167 + +1.0
331,167 + -0.2
331,167 + -0.9
331,172 + -0.8
331,175 - -0.5
331,175 - -0.9
331,243 + -0.5
331,297 + -0.1
331,297 + -1.7
331,313 + -0.8
331,315 + -1.4
331,320 + -0.0
331,333 - -0.2
331,404 + -1.7
331,414 + -0.6
331,459 + -1.3
331,469 - +1.4
331,497 + +0.1
331,499 + B158DRAFT_2184 0.10 -0.1
331,499 + B158DRAFT_2184 0.10 -0.3
331,504 + B158DRAFT_2184 0.10 -0.4
331,507 - B158DRAFT_2184 0.10 +1.8
331,540 + B158DRAFT_2184 0.12 +1.3
331,559 + B158DRAFT_2184 0.13 -0.1
331,559 + B158DRAFT_2184 0.13 -0.3
331,654 + B158DRAFT_2184 0.19 +0.4
331,741 + B158DRAFT_2184 0.23 -2.0
331,801 + B158DRAFT_2184 0.27 -1.1
331,801 + B158DRAFT_2184 0.27 -1.3
331,801 + B158DRAFT_2184 0.27 -0.3
331,872 + B158DRAFT_2184 0.31 +1.5
331,872 + B158DRAFT_2184 0.31 -0.5
331,894 + B158DRAFT_2184 0.32 +0.3
331,894 + B158DRAFT_2184 0.32 -0.4
332,118 + B158DRAFT_2184 0.44 -1.3
332,124 + B158DRAFT_2184 0.45 -0.5
332,134 + B158DRAFT_2184 0.45 +0.5
332,142 + B158DRAFT_2184 0.46 -0.1
332,196 + B158DRAFT_2184 0.49 -0.8
332,196 + B158DRAFT_2184 0.49 -0.4
332,208 + B158DRAFT_2184 0.49 -0.6
332,208 + B158DRAFT_2184 0.49 +1.2
332,208 + B158DRAFT_2184 0.49 -0.6
332,208 + B158DRAFT_2184 0.49 -0.2
332,208 + B158DRAFT_2184 0.49 +0.6
332,213 + B158DRAFT_2184 0.49 +0.2
332,234 + B158DRAFT_2184 0.51 -0.2
332,234 + B158DRAFT_2184 0.51 +0.3
332,234 + B158DRAFT_2184 0.51 -0.2
332,273 + B158DRAFT_2184 0.53 -1.9
332,313 + B158DRAFT_2184 0.55 -0.7
332,313 + B158DRAFT_2184 0.55 -0.7
332,386 + B158DRAFT_2184 0.59 -1.1
332,461 + B158DRAFT_2184 0.63 -0.2
332,593 + B158DRAFT_2184 0.70 +1.6
332,608 + B158DRAFT_2184 0.71 -0.1
332,608 + B158DRAFT_2184 0.71 -0.5
332,644 + B158DRAFT_2184 0.73 -0.8
332,644 + B158DRAFT_2184 0.73 -0.1
332,677 + B158DRAFT_2184 0.75 -0.8
332,697 + B158DRAFT_2184 0.76 -0.4
332,748 + B158DRAFT_2184 0.79 +1.7
332,848 + B158DRAFT_2184 0.85 -1.0
332,876 + B158DRAFT_2184 0.86 +0.8
332,877 + B158DRAFT_2184 0.86 -0.4
332,982 + +0.8
332,982 + +0.2
332,982 + -0.3
332,982 + -2.0
332,982 + +0.1
333,008 + +0.2
333,008 + -1.8
333,989 + -0.4
334,063 + +0.6
334,063 + -0.5
334,063 + -1.5
334,063 + +1.0
334,107 + +1.4

Or see this region's nucleotide sequence