Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1914

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1913 and B158DRAFT_1914 are separated by 164 nucleotidesB158DRAFT_1914 and B158DRAFT_1915 overlap by 4 nucleotidesB158DRAFT_1915 and B158DRAFT_1916 are separated by 20 nucleotides B158DRAFT_1913: B158DRAFT_1913 - Membrane protease subunits, stomatin/prohibitin homologs, at 48,484 to 49,848 _1913 B158DRAFT_1914: B158DRAFT_1914 - 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78), at 50,013 to 50,498 _1914 B158DRAFT_1915: B158DRAFT_1915 - NusB antitermination factor, at 50,495 to 50,923 _1915 B158DRAFT_1916: B158DRAFT_1916 - thiamine-monophosphate kinase, at 50,944 to 51,909 _1916 Position (kb) 50 51Strain fitness (log2 ratio) -1 0 1at 49.040 kb on + strand, within B158DRAFT_1913at 49.048 kb on + strand, within B158DRAFT_1913at 49.056 kb on - strand, within B158DRAFT_1913at 49.083 kb on + strand, within B158DRAFT_1913at 49.126 kb on + strand, within B158DRAFT_1913at 49.229 kb on - strand, within B158DRAFT_1913at 49.238 kb on + strand, within B158DRAFT_1913at 49.301 kb on + strand, within B158DRAFT_1913at 49.309 kb on - strand, within B158DRAFT_1913at 49.325 kb on + strand, within B158DRAFT_1913at 49.325 kb on + strand, within B158DRAFT_1913at 49.325 kb on + strand, within B158DRAFT_1913at 49.353 kb on - strand, within B158DRAFT_1913at 49.368 kb on + strand, within B158DRAFT_1913at 49.376 kb on - strand, within B158DRAFT_1913at 49.504 kb on - strand, within B158DRAFT_1913at 49.530 kb on + strand, within B158DRAFT_1913at 49.538 kb on - strand, within B158DRAFT_1913at 49.600 kb on - strand, within B158DRAFT_1913at 49.602 kb on - strand, within B158DRAFT_1913at 49.692 kb on + strand, within B158DRAFT_1913at 49.700 kb on + strand, within B158DRAFT_1913at 49.728 kb on - strandat 49.911 kb on + strandat 49.911 kb on + strandat 49.923 kb on + strandat 50.893 kb on + strandat 50.903 kb on + strandat 50.930 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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49,040 + B158DRAFT_1913 0.41 -1.1
49,048 + B158DRAFT_1913 0.41 +0.8
49,056 - B158DRAFT_1913 0.42 -0.9
49,083 + B158DRAFT_1913 0.44 -0.7
49,126 + B158DRAFT_1913 0.47 -1.6
49,229 - B158DRAFT_1913 0.55 -1.4
49,238 + B158DRAFT_1913 0.55 -0.7
49,301 + B158DRAFT_1913 0.60 -0.7
49,309 - B158DRAFT_1913 0.60 -0.5
49,325 + B158DRAFT_1913 0.62 +0.2
49,325 + B158DRAFT_1913 0.62 +0.5
49,325 + B158DRAFT_1913 0.62 -0.2
49,353 - B158DRAFT_1913 0.64 -0.7
49,368 + B158DRAFT_1913 0.65 -0.4
49,376 - B158DRAFT_1913 0.65 -1.3
49,504 - B158DRAFT_1913 0.75 -0.7
49,530 + B158DRAFT_1913 0.77 +0.8
49,538 - B158DRAFT_1913 0.77 -0.9
49,600 - B158DRAFT_1913 0.82 -1.5
49,602 - B158DRAFT_1913 0.82 +0.4
49,692 + B158DRAFT_1913 0.88 -0.1
49,700 + B158DRAFT_1913 0.89 -1.5
49,728 - -0.9
49,911 + -1.6
49,911 + -1.0
49,923 + -0.7
50,893 + +0.7
50,903 + +0.4
50,930 + -1.2

Or see this region's nucleotide sequence