Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1833

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1832 and B158DRAFT_1833 are separated by 107 nucleotidesB158DRAFT_1833 and B158DRAFT_1834 are separated by 220 nucleotidesB158DRAFT_1834 and B158DRAFT_1835 overlap by 1 nucleotides B158DRAFT_1832: B158DRAFT_1832 - L-threonine aldolase (EC 4.1.2.5), at 1,930,395 to 1,931,402 _1832 B158DRAFT_1833: B158DRAFT_1833 - Uncharacterized flavoproteins, at 1,931,510 to 1,932,322 _1833 B158DRAFT_1834: B158DRAFT_1834 - SOS-response transcriptional repressors (RecA-mediated autopeptidases), at 1,932,543 to 1,932,965 _1834 B158DRAFT_1835: B158DRAFT_1835 - Nucleotidyltransferase/DNA polymerase involved in DNA repair, at 1,932,965 to 1,934,233 _1835 Position (kb) 1931 1932 1933Strain fitness (log2 ratio) -2 -1 0 1 2at 1930.529 kb on + strand, within B158DRAFT_1832at 1930.537 kb on - strand, within B158DRAFT_1832at 1930.562 kb on + strand, within B158DRAFT_1832at 1930.674 kb on - strand, within B158DRAFT_1832at 1930.686 kb on + strand, within B158DRAFT_1832at 1930.729 kb on - strand, within B158DRAFT_1832at 1930.782 kb on - strand, within B158DRAFT_1832at 1930.782 kb on - strand, within B158DRAFT_1832at 1930.784 kb on + strand, within B158DRAFT_1832at 1930.784 kb on + strand, within B158DRAFT_1832at 1930.784 kb on + strand, within B158DRAFT_1832at 1930.791 kb on + strand, within B158DRAFT_1832at 1930.791 kb on + strand, within B158DRAFT_1832at 1930.792 kb on - strand, within B158DRAFT_1832at 1930.792 kb on - strand, within B158DRAFT_1832at 1930.792 kb on - strand, within B158DRAFT_1832at 1930.799 kb on - strand, within B158DRAFT_1832at 1930.811 kb on + strand, within B158DRAFT_1832at 1930.832 kb on - strand, within B158DRAFT_1832at 1930.854 kb on + strand, within B158DRAFT_1832at 1930.869 kb on + strand, within B158DRAFT_1832at 1930.870 kb on - strand, within B158DRAFT_1832at 1930.870 kb on - strand, within B158DRAFT_1832at 1930.870 kb on - strand, within B158DRAFT_1832at 1930.870 kb on - strand, within B158DRAFT_1832at 1930.885 kb on - strand, within B158DRAFT_1832at 1930.886 kb on + strand, within B158DRAFT_1832at 1930.913 kb on - strand, within B158DRAFT_1832at 1930.961 kb on + strand, within B158DRAFT_1832at 1930.969 kb on + strand, within B158DRAFT_1832at 1930.976 kb on - strand, within B158DRAFT_1832at 1931.058 kb on - strand, within B158DRAFT_1832at 1931.067 kb on + strand, within B158DRAFT_1832at 1931.067 kb on + strand, within B158DRAFT_1832at 1931.074 kb on + strand, within B158DRAFT_1832at 1931.075 kb on - strand, within B158DRAFT_1832at 1931.075 kb on - strand, within B158DRAFT_1832at 1931.075 kb on - strand, within B158DRAFT_1832at 1931.075 kb on - strand, within B158DRAFT_1832at 1931.075 kb on - strand, within B158DRAFT_1832at 1931.092 kb on + strand, within B158DRAFT_1832at 1931.105 kb on + strand, within B158DRAFT_1832at 1931.105 kb on + strand, within B158DRAFT_1832at 1931.113 kb on - strand, within B158DRAFT_1832at 1931.115 kb on + strand, within B158DRAFT_1832at 1931.115 kb on + strand, within B158DRAFT_1832at 1931.115 kb on + strand, within B158DRAFT_1832at 1931.115 kb on + strand, within B158DRAFT_1832at 1931.115 kb on + strand, within B158DRAFT_1832at 1931.121 kb on - strand, within B158DRAFT_1832at 1931.123 kb on - strand, within B158DRAFT_1832at 1931.123 kb on - strand, within B158DRAFT_1832at 1931.123 kb on - strand, within B158DRAFT_1832at 1931.123 kb on - strand, within B158DRAFT_1832at 1931.127 kb on + strand, within B158DRAFT_1832at 1931.145 kb on - strand, within B158DRAFT_1832at 1931.170 kb on + strand, within B158DRAFT_1832at 1931.185 kb on - strand, within B158DRAFT_1832at 1931.188 kb on + strand, within B158DRAFT_1832at 1931.287 kb on + strand, within B158DRAFT_1832at 1931.328 kb on - strandat 1931.335 kb on + strandat 1931.335 kb on + strandat 1931.343 kb on - strandat 1931.355 kb on - strandat 1931.373 kb on - strandat 1931.378 kb on + strandat 1931.378 kb on + strandat 1931.424 kb on + strandat 1931.424 kb on + strandat 1931.424 kb on + strandat 1931.424 kb on + strandat 1931.424 kb on + strandat 1931.432 kb on - strandat 1931.432 kb on - strandat 1931.507 kb on + strandat 1931.507 kb on + strandat 1931.507 kb on + strandat 1931.508 kb on + strandat 1931.515 kb on - strandat 1931.515 kb on - strandat 1931.515 kb on - strandat 1931.515 kb on - strandat 1931.541 kb on + strandat 1931.541 kb on + strandat 1931.558 kb on + strandat 1931.564 kb on + strandat 1931.605 kb on + strand, within B158DRAFT_1833at 1931.605 kb on + strand, within B158DRAFT_1833at 1931.610 kb on + strand, within B158DRAFT_1833at 1931.723 kb on - strand, within B158DRAFT_1833at 1931.723 kb on - strand, within B158DRAFT_1833at 1931.723 kb on - strand, within B158DRAFT_1833at 1931.733 kb on - strand, within B158DRAFT_1833at 1931.772 kb on + strand, within B158DRAFT_1833at 1931.772 kb on + strand, within B158DRAFT_1833at 1931.807 kb on + strand, within B158DRAFT_1833at 1931.822 kb on - strand, within B158DRAFT_1833at 1931.822 kb on - strand, within B158DRAFT_1833at 1931.822 kb on - strand, within B158DRAFT_1833at 1931.879 kb on + strand, within B158DRAFT_1833at 1931.887 kb on - strand, within B158DRAFT_1833at 1931.919 kb on - strand, within B158DRAFT_1833at 1931.922 kb on - strand, within B158DRAFT_1833at 1931.927 kb on - strand, within B158DRAFT_1833at 1931.932 kb on - strand, within B158DRAFT_1833at 1932.007 kb on - strand, within B158DRAFT_1833at 1932.007 kb on - strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.150 kb on + strand, within B158DRAFT_1833at 1932.162 kb on + strand, within B158DRAFT_1833at 1932.192 kb on - strand, within B158DRAFT_1833at 1932.198 kb on + strand, within B158DRAFT_1833at 1932.238 kb on - strand, within B158DRAFT_1833at 1932.249 kb on + strandat 1932.281 kb on - strandat 1932.324 kb on + strandat 1932.367 kb on - strandat 1932.461 kb on + strandat 1932.591 kb on + strand, within B158DRAFT_1834at 1932.591 kb on + strand, within B158DRAFT_1834at 1932.591 kb on + strand, within B158DRAFT_1834at 1932.591 kb on + strand, within B158DRAFT_1834at 1932.599 kb on - strand, within B158DRAFT_1834at 1932.599 kb on - strand, within B158DRAFT_1834at 1932.599 kb on - strand, within B158DRAFT_1834at 1932.639 kb on - strand, within B158DRAFT_1834at 1932.651 kb on + strand, within B158DRAFT_1834at 1932.669 kb on - strand, within B158DRAFT_1834at 1932.890 kb on - strand, within B158DRAFT_1834at 1932.893 kb on + strand, within B158DRAFT_1834at 1932.904 kb on - strand, within B158DRAFT_1834at 1932.928 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1933.002 kb on - strandat 1933.016 kb on - strandat 1933.016 kb on - strandat 1933.092 kb on + strand, within B158DRAFT_1835at 1933.127 kb on + strand, within B158DRAFT_1835at 1933.182 kb on - strand, within B158DRAFT_1835at 1933.200 kb on + strand, within B158DRAFT_1835at 1933.208 kb on - strand, within B158DRAFT_1835at 1933.268 kb on + strand, within B158DRAFT_1835at 1933.320 kb on + strand, within B158DRAFT_1835at 1933.320 kb on + strand, within B158DRAFT_1835at 1933.320 kb on + strand, within B158DRAFT_1835

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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1,930,529 + B158DRAFT_1832 0.13 -0.3
1,930,537 - B158DRAFT_1832 0.14 -1.5
1,930,562 + B158DRAFT_1832 0.17 -0.5
1,930,674 - B158DRAFT_1832 0.28 -0.5
1,930,686 + B158DRAFT_1832 0.29 +0.2
1,930,729 - B158DRAFT_1832 0.33 -1.2
1,930,782 - B158DRAFT_1832 0.38 +0.2
1,930,782 - B158DRAFT_1832 0.38 -1.7
1,930,784 + B158DRAFT_1832 0.39 -1.3
1,930,784 + B158DRAFT_1832 0.39 +0.0
1,930,784 + B158DRAFT_1832 0.39 -0.5
1,930,791 + B158DRAFT_1832 0.39 -0.6
1,930,791 + B158DRAFT_1832 0.39 +0.4
1,930,792 - B158DRAFT_1832 0.39 +2.2
1,930,792 - B158DRAFT_1832 0.39 -0.7
1,930,792 - B158DRAFT_1832 0.39 +0.2
1,930,799 - B158DRAFT_1832 0.40 +0.4
1,930,811 + B158DRAFT_1832 0.41 -0.1
1,930,832 - B158DRAFT_1832 0.43 -1.2
1,930,854 + B158DRAFT_1832 0.46 +0.2
1,930,869 + B158DRAFT_1832 0.47 -0.6
1,930,870 - B158DRAFT_1832 0.47 +0.1
1,930,870 - B158DRAFT_1832 0.47 -0.0
1,930,870 - B158DRAFT_1832 0.47 -1.2
1,930,870 - B158DRAFT_1832 0.47 -0.8
1,930,885 - B158DRAFT_1832 0.49 -0.0
1,930,886 + B158DRAFT_1832 0.49 -0.3
1,930,913 - B158DRAFT_1832 0.51 +0.1
1,930,961 + B158DRAFT_1832 0.56 +0.5
1,930,969 + B158DRAFT_1832 0.57 -0.8
1,930,976 - B158DRAFT_1832 0.58 +0.1
1,931,058 - B158DRAFT_1832 0.66 -0.1
1,931,067 + B158DRAFT_1832 0.67 +0.5
1,931,067 + B158DRAFT_1832 0.67 +0.3
1,931,074 + B158DRAFT_1832 0.67 -0.1
1,931,075 - B158DRAFT_1832 0.67 +0.3
1,931,075 - B158DRAFT_1832 0.67 -1.4
1,931,075 - B158DRAFT_1832 0.67 -0.4
1,931,075 - B158DRAFT_1832 0.67 +0.4
1,931,075 - B158DRAFT_1832 0.67 -0.6
1,931,092 + B158DRAFT_1832 0.69 -0.0
1,931,105 + B158DRAFT_1832 0.70 -0.5
1,931,105 + B158DRAFT_1832 0.70 -0.9
1,931,113 - B158DRAFT_1832 0.71 +0.1
1,931,115 + B158DRAFT_1832 0.71 -1.4
1,931,115 + B158DRAFT_1832 0.71 -1.7
1,931,115 + B158DRAFT_1832 0.71 -0.0
1,931,115 + B158DRAFT_1832 0.71 -0.1
1,931,115 + B158DRAFT_1832 0.71 +0.6
1,931,121 - B158DRAFT_1832 0.72 +0.1
1,931,123 - B158DRAFT_1832 0.72 -0.1
1,931,123 - B158DRAFT_1832 0.72 +0.6
1,931,123 - B158DRAFT_1832 0.72 -0.6
1,931,123 - B158DRAFT_1832 0.72 -0.3
1,931,127 + B158DRAFT_1832 0.73 +0.2
1,931,145 - B158DRAFT_1832 0.74 +0.4
1,931,170 + B158DRAFT_1832 0.77 -0.2
1,931,185 - B158DRAFT_1832 0.78 -0.2
1,931,188 + B158DRAFT_1832 0.79 -0.9
1,931,287 + B158DRAFT_1832 0.88 -0.8
1,931,328 - -0.3
1,931,335 + -0.2
1,931,335 + -0.4
1,931,343 - -1.5
1,931,355 - -0.6
1,931,373 - -0.3
1,931,378 + +1.2
1,931,378 + -1.1
1,931,424 + -0.0
1,931,424 + -1.0
1,931,424 + -1.5
1,931,424 + -0.0
1,931,424 + -0.4
1,931,432 - +0.6
1,931,432 - -1.7
1,931,507 + +0.4
1,931,507 + +0.4
1,931,507 + -0.1
1,931,508 + -0.2
1,931,515 - -0.1
1,931,515 - -0.6
1,931,515 - -0.6
1,931,515 - -0.9
1,931,541 + +0.3
1,931,541 + +0.1
1,931,558 + -0.0
1,931,564 + +0.2
1,931,605 + B158DRAFT_1833 0.12 -0.4
1,931,605 + B158DRAFT_1833 0.12 -0.4
1,931,610 + B158DRAFT_1833 0.12 -0.5
1,931,723 - B158DRAFT_1833 0.26 +0.3
1,931,723 - B158DRAFT_1833 0.26 +0.3
1,931,723 - B158DRAFT_1833 0.26 -1.0
1,931,733 - B158DRAFT_1833 0.27 +0.5
1,931,772 + B158DRAFT_1833 0.32 -0.4
1,931,772 + B158DRAFT_1833 0.32 +1.5
1,931,807 + B158DRAFT_1833 0.37 -0.5
1,931,822 - B158DRAFT_1833 0.38 -0.3
1,931,822 - B158DRAFT_1833 0.38 -0.5
1,931,822 - B158DRAFT_1833 0.38 -0.4
1,931,879 + B158DRAFT_1833 0.45 -0.4
1,931,887 - B158DRAFT_1833 0.46 +0.7
1,931,919 - B158DRAFT_1833 0.50 -1.9
1,931,922 - B158DRAFT_1833 0.51 +0.2
1,931,927 - B158DRAFT_1833 0.51 +0.1
1,931,932 - B158DRAFT_1833 0.52 +1.3
1,932,007 - B158DRAFT_1833 0.61 -0.5
1,932,007 - B158DRAFT_1833 0.61 -0.1
1,932,022 + B158DRAFT_1833 0.63 -0.2
1,932,022 + B158DRAFT_1833 0.63 -0.6
1,932,022 + B158DRAFT_1833 0.63 -0.3
1,932,022 + B158DRAFT_1833 0.63 +0.2
1,932,022 + B158DRAFT_1833 0.63 +0.1
1,932,022 + B158DRAFT_1833 0.63 -0.4
1,932,022 + B158DRAFT_1833 0.63 -0.5
1,932,022 + B158DRAFT_1833 0.63 +1.2
1,932,022 + B158DRAFT_1833 0.63 +0.1
1,932,022 + B158DRAFT_1833 0.63 +0.2
1,932,022 + B158DRAFT_1833 0.63 -1.3
1,932,022 + B158DRAFT_1833 0.63 -0.2
1,932,022 + B158DRAFT_1833 0.63 -0.5
1,932,030 - B158DRAFT_1833 0.64 +0.9
1,932,030 - B158DRAFT_1833 0.64 -0.1
1,932,030 - B158DRAFT_1833 0.64 -0.5
1,932,030 - B158DRAFT_1833 0.64 +0.1
1,932,030 - B158DRAFT_1833 0.64 +0.9
1,932,030 - B158DRAFT_1833 0.64 -0.6
1,932,030 - B158DRAFT_1833 0.64 -0.3
1,932,030 - B158DRAFT_1833 0.64 -0.3
1,932,150 + B158DRAFT_1833 0.79 -0.3
1,932,162 + B158DRAFT_1833 0.80 -0.5
1,932,192 - B158DRAFT_1833 0.84 -0.6
1,932,198 + B158DRAFT_1833 0.85 +0.7
1,932,238 - B158DRAFT_1833 0.90 -0.5
1,932,249 + +0.6
1,932,281 - -0.1
1,932,324 + -1.1
1,932,367 - -0.2
1,932,461 + -0.0
1,932,591 + B158DRAFT_1834 0.11 -0.4
1,932,591 + B158DRAFT_1834 0.11 -0.4
1,932,591 + B158DRAFT_1834 0.11 -0.8
1,932,591 + B158DRAFT_1834 0.11 +0.0
1,932,599 - B158DRAFT_1834 0.13 -0.2
1,932,599 - B158DRAFT_1834 0.13 -0.1
1,932,599 - B158DRAFT_1834 0.13 -0.6
1,932,639 - B158DRAFT_1834 0.23 -0.9
1,932,651 + B158DRAFT_1834 0.26 -2.1
1,932,669 - B158DRAFT_1834 0.30 -0.1
1,932,890 - B158DRAFT_1834 0.82 -1.3
1,932,893 + B158DRAFT_1834 0.83 +0.3
1,932,904 - B158DRAFT_1834 0.85 -2.0
1,932,928 + -0.5
1,932,984 + -1.4
1,932,984 + -1.0
1,932,984 + +0.3
1,932,984 + -0.9
1,932,984 + -1.6
1,932,992 - +0.5
1,932,992 - -1.3
1,932,992 - +0.4
1,932,992 - -0.1
1,932,992 - -0.1
1,933,002 - +0.1
1,933,016 - -1.0
1,933,016 - -0.6
1,933,092 + B158DRAFT_1835 0.10 -0.4
1,933,127 + B158DRAFT_1835 0.13 +0.2
1,933,182 - B158DRAFT_1835 0.17 -0.6
1,933,200 + B158DRAFT_1835 0.19 +0.2
1,933,208 - B158DRAFT_1835 0.19 +0.3
1,933,268 + B158DRAFT_1835 0.24 +0.0
1,933,320 + B158DRAFT_1835 0.28 -2.1
1,933,320 + B158DRAFT_1835 0.28 +0.0
1,933,320 + B158DRAFT_1835 0.28 +0.9

Or see this region's nucleotide sequence