Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1181 and B158DRAFT_1182 are separated by 28 nucleotides B158DRAFT_1182 and B158DRAFT_1183 are separated by 68 nucleotides B158DRAFT_1183 and B158DRAFT_1184 are separated by 48 nucleotides
B158DRAFT_1181: B158DRAFT_1181 - diguanylate cyclase (GGDEF) domain, at 1,220,952 to 1,222,853
_1181
B158DRAFT_1182: B158DRAFT_1182 - TIGR03643 family protein, at 1,222,882 to 1,223,127
_1182
B158DRAFT_1183: B158DRAFT_1183 - hypothetical protein, at 1,223,196 to 1,223,933
_1183
B158DRAFT_1184: B158DRAFT_1184 - hypothetical protein, at 1,223,982 to 1,224,341
_1184
Position (kb)
1222
1223
1224 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1221.887 kb on - strand, within B158DRAFT_1181 at 1221.887 kb on - strand, within B158DRAFT_1181 at 1221.942 kb on - strand, within B158DRAFT_1181 at 1221.947 kb on - strand, within B158DRAFT_1181 at 1222.063 kb on + strand, within B158DRAFT_1181 at 1222.086 kb on - strand, within B158DRAFT_1181 at 1222.091 kb on - strand, within B158DRAFT_1181 at 1222.091 kb on - strand, within B158DRAFT_1181 at 1222.134 kb on - strand, within B158DRAFT_1181 at 1222.144 kb on - strand, within B158DRAFT_1181 at 1222.157 kb on + strand, within B158DRAFT_1181 at 1222.165 kb on - strand, within B158DRAFT_1181 at 1222.244 kb on + strand, within B158DRAFT_1181 at 1222.244 kb on - strand, within B158DRAFT_1181 at 1222.317 kb on + strand, within B158DRAFT_1181 at 1222.365 kb on - strand, within B158DRAFT_1181 at 1222.383 kb on + strand, within B158DRAFT_1181 at 1222.394 kb on - strand, within B158DRAFT_1181 at 1222.411 kb on + strand, within B158DRAFT_1181 at 1222.477 kb on + strand, within B158DRAFT_1181 at 1222.610 kb on - strand, within B158DRAFT_1181 at 1222.646 kb on - strand, within B158DRAFT_1181 at 1222.802 kb on + strand at 1222.810 kb on - strand at 1222.810 kb on - strand at 1222.810 kb on - strand at 1222.810 kb on - strand at 1222.840 kb on + strand at 1222.840 kb on + strand at 1222.840 kb on + strand at 1222.848 kb on - strand at 1222.848 kb on - strand at 1222.894 kb on + strand at 1222.902 kb on - strand at 1222.907 kb on - strand, within B158DRAFT_1182 at 1222.923 kb on + strand, within B158DRAFT_1182 at 1222.931 kb on - strand, within B158DRAFT_1182 at 1222.997 kb on + strand, within B158DRAFT_1182 at 1222.998 kb on + strand, within B158DRAFT_1182 at 1222.999 kb on + strand, within B158DRAFT_1182 at 1223.007 kb on - strand, within B158DRAFT_1182 at 1223.007 kb on - strand, within B158DRAFT_1182 at 1223.017 kb on - strand, within B158DRAFT_1182 at 1223.042 kb on - strand, within B158DRAFT_1182 at 1223.053 kb on + strand, within B158DRAFT_1182 at 1223.053 kb on + strand, within B158DRAFT_1182 at 1223.053 kb on + strand, within B158DRAFT_1182 at 1223.152 kb on - strand at 1223.354 kb on + strand, within B158DRAFT_1183 at 1223.362 kb on - strand, within B158DRAFT_1183 at 1223.412 kb on - strand, within B158DRAFT_1183 at 1223.414 kb on + strand, within B158DRAFT_1183 at 1223.414 kb on + strand, within B158DRAFT_1183 at 1223.465 kb on - strand, within B158DRAFT_1183 at 1223.494 kb on + strand, within B158DRAFT_1183 at 1223.561 kb on + strand, within B158DRAFT_1183 at 1223.561 kb on + strand, within B158DRAFT_1183 at 1223.561 kb on + strand, within B158DRAFT_1183 at 1223.569 kb on - strand, within B158DRAFT_1183 at 1223.569 kb on - strand, within B158DRAFT_1183 at 1223.569 kb on - strand, within B158DRAFT_1183 at 1223.611 kb on - strand, within B158DRAFT_1183 at 1223.612 kb on + strand, within B158DRAFT_1183 at 1223.675 kb on + strand, within B158DRAFT_1183 at 1223.675 kb on + strand, within B158DRAFT_1183 at 1223.675 kb on + strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.698 kb on + strand, within B158DRAFT_1183 at 1223.698 kb on - strand, within B158DRAFT_1183 at 1223.698 kb on - strand, within B158DRAFT_1183 at 1223.708 kb on + strand, within B158DRAFT_1183 at 1223.708 kb on + strand, within B158DRAFT_1183 at 1223.716 kb on - strand, within B158DRAFT_1183 at 1223.746 kb on + strand, within B158DRAFT_1183 at 1223.751 kb on + strand, within B158DRAFT_1183 at 1223.754 kb on - strand, within B158DRAFT_1183 at 1223.806 kb on - strand, within B158DRAFT_1183 at 1223.817 kb on + strand, within B158DRAFT_1183 at 1223.825 kb on + strand, within B158DRAFT_1183 at 1223.836 kb on + strand, within B158DRAFT_1183 at 1223.846 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.866 kb on - strand at 1223.866 kb on - strand at 1223.923 kb on - strand at 1223.923 kb on - strand at 1224.058 kb on - strand, within B158DRAFT_1184 at 1224.058 kb on - strand, within B158DRAFT_1184
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml remove 1,221,887 - B158DRAFT_1181 0.49 -0.4 1,221,887 - B158DRAFT_1181 0.49 -0.1 1,221,942 - B158DRAFT_1181 0.52 -0.8 1,221,947 - B158DRAFT_1181 0.52 +0.1 1,222,063 + B158DRAFT_1181 0.58 -1.4 1,222,086 - B158DRAFT_1181 0.60 -0.4 1,222,091 - B158DRAFT_1181 0.60 +0.7 1,222,091 - B158DRAFT_1181 0.60 -0.0 1,222,134 - B158DRAFT_1181 0.62 +0.5 1,222,144 - B158DRAFT_1181 0.63 -0.1 1,222,157 + B158DRAFT_1181 0.63 -0.3 1,222,165 - B158DRAFT_1181 0.64 -0.6 1,222,244 + B158DRAFT_1181 0.68 +0.6 1,222,244 - B158DRAFT_1181 0.68 -0.2 1,222,317 + B158DRAFT_1181 0.72 -0.8 1,222,365 - B158DRAFT_1181 0.74 -0.4 1,222,383 + B158DRAFT_1181 0.75 -0.5 1,222,394 - B158DRAFT_1181 0.76 +1.0 1,222,411 + B158DRAFT_1181 0.77 +0.1 1,222,477 + B158DRAFT_1181 0.80 -0.8 1,222,610 - B158DRAFT_1181 0.87 -0.5 1,222,646 - B158DRAFT_1181 0.89 -0.1 1,222,802 + -2.0 1,222,810 - -0.4 1,222,810 - -0.2 1,222,810 - -0.8 1,222,810 - -0.4 1,222,840 + -0.1 1,222,840 + -0.8 1,222,840 + -1.7 1,222,848 - +0.5 1,222,848 - +0.3 1,222,894 + -0.1 1,222,902 - -0.7 1,222,907 - B158DRAFT_1182 0.10 -1.3 1,222,923 + B158DRAFT_1182 0.17 -1.5 1,222,931 - B158DRAFT_1182 0.20 -1.1 1,222,997 + B158DRAFT_1182 0.47 -1.1 1,222,998 + B158DRAFT_1182 0.47 -0.0 1,222,999 + B158DRAFT_1182 0.48 -0.9 1,223,007 - B158DRAFT_1182 0.51 -0.2 1,223,007 - B158DRAFT_1182 0.51 -0.5 1,223,017 - B158DRAFT_1182 0.55 -0.9 1,223,042 - B158DRAFT_1182 0.65 -1.0 1,223,053 + B158DRAFT_1182 0.70 +0.3 1,223,053 + B158DRAFT_1182 0.70 -0.3 1,223,053 + B158DRAFT_1182 0.70 -0.3 1,223,152 - -0.1 1,223,354 + B158DRAFT_1183 0.21 +0.5 1,223,362 - B158DRAFT_1183 0.22 -0.5 1,223,412 - B158DRAFT_1183 0.29 -0.7 1,223,414 + B158DRAFT_1183 0.30 +0.2 1,223,414 + B158DRAFT_1183 0.30 -0.3 1,223,465 - B158DRAFT_1183 0.36 +0.0 1,223,494 + B158DRAFT_1183 0.40 -0.1 1,223,561 + B158DRAFT_1183 0.49 -0.4 1,223,561 + B158DRAFT_1183 0.49 +0.7 1,223,561 + B158DRAFT_1183 0.49 +1.2 1,223,569 - B158DRAFT_1183 0.51 -0.1 1,223,569 - B158DRAFT_1183 0.51 -2.2 1,223,569 - B158DRAFT_1183 0.51 +0.1 1,223,611 - B158DRAFT_1183 0.56 +0.3 1,223,612 + B158DRAFT_1183 0.56 -0.6 1,223,675 + B158DRAFT_1183 0.65 -0.2 1,223,675 + B158DRAFT_1183 0.65 -1.3 1,223,675 + B158DRAFT_1183 0.65 -1.1 1,223,683 - B158DRAFT_1183 0.66 +0.2 1,223,683 - B158DRAFT_1183 0.66 -1.9 1,223,683 - B158DRAFT_1183 0.66 -2.1 1,223,683 - B158DRAFT_1183 0.66 +1.2 1,223,683 - B158DRAFT_1183 0.66 +0.2 1,223,698 + B158DRAFT_1183 0.68 -0.2 1,223,698 - B158DRAFT_1183 0.68 -0.4 1,223,698 - B158DRAFT_1183 0.68 -0.5 1,223,708 + B158DRAFT_1183 0.69 -0.8 1,223,708 + B158DRAFT_1183 0.69 -0.1 1,223,716 - B158DRAFT_1183 0.70 +0.4 1,223,746 + B158DRAFT_1183 0.75 +1.0 1,223,751 + B158DRAFT_1183 0.75 -0.9 1,223,754 - B158DRAFT_1183 0.76 -0.1 1,223,806 - B158DRAFT_1183 0.83 +0.6 1,223,817 + B158DRAFT_1183 0.84 +0.0 1,223,825 + B158DRAFT_1183 0.85 -0.4 1,223,836 + B158DRAFT_1183 0.87 -0.2 1,223,846 + B158DRAFT_1183 0.88 -1.1 1,223,858 + B158DRAFT_1183 0.90 +2.0 1,223,858 + B158DRAFT_1183 0.90 -0.7 1,223,858 + B158DRAFT_1183 0.90 -1.1 1,223,858 + B158DRAFT_1183 0.90 -1.3 1,223,866 - +0.9 1,223,866 - -0.6 1,223,923 - -0.9 1,223,923 - -1.4 1,224,058 - B158DRAFT_1184 0.21 +1.5 1,224,058 - B158DRAFT_1184 0.21 -0.2
Or see this region's nucleotide sequence