Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1178

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1177 and B158DRAFT_1178 are separated by 44 nucleotidesB158DRAFT_1178 and B158DRAFT_1179 are separated by 116 nucleotides B158DRAFT_1177: B158DRAFT_1177 - hypothetical protein, at 1,216,115 to 1,217,236 _1177 B158DRAFT_1178: B158DRAFT_1178 - Sortase and related acyltransferases, at 1,217,281 to 1,217,772 _1178 B158DRAFT_1179: B158DRAFT_1179 - Uncharacterized protein conserved in bacteria, at 1,217,889 to 1,218,884 _1179 Position (kb) 1217 1218Strain fitness (log2 ratio) -2 -1 0 1 2at 1216.286 kb on - strand, within B158DRAFT_1177at 1216.315 kb on + strand, within B158DRAFT_1177at 1216.321 kb on + strand, within B158DRAFT_1177at 1216.324 kb on - strand, within B158DRAFT_1177at 1216.329 kb on - strand, within B158DRAFT_1177at 1216.334 kb on - strand, within B158DRAFT_1177at 1216.447 kb on - strand, within B158DRAFT_1177at 1216.472 kb on - strand, within B158DRAFT_1177at 1216.531 kb on + strand, within B158DRAFT_1177at 1216.654 kb on + strand, within B158DRAFT_1177at 1216.654 kb on + strand, within B158DRAFT_1177at 1216.662 kb on - strand, within B158DRAFT_1177at 1216.662 kb on - strand, within B158DRAFT_1177at 1216.662 kb on - strand, within B158DRAFT_1177at 1216.668 kb on + strand, within B158DRAFT_1177at 1216.702 kb on - strand, within B158DRAFT_1177at 1216.741 kb on + strand, within B158DRAFT_1177at 1216.764 kb on - strand, within B158DRAFT_1177at 1216.798 kb on + strand, within B158DRAFT_1177at 1216.842 kb on - strand, within B158DRAFT_1177at 1216.876 kb on + strand, within B158DRAFT_1177at 1216.981 kb on + strand, within B158DRAFT_1177at 1216.994 kb on + strand, within B158DRAFT_1177at 1217.002 kb on - strand, within B158DRAFT_1177at 1217.002 kb on - strand, within B158DRAFT_1177at 1217.002 kb on - strand, within B158DRAFT_1177at 1217.012 kb on - strand, within B158DRAFT_1177at 1217.012 kb on - strand, within B158DRAFT_1177at 1217.012 kb on - strand, within B158DRAFT_1177at 1217.022 kb on + strand, within B158DRAFT_1177at 1217.022 kb on + strand, within B158DRAFT_1177at 1217.022 kb on + strand, within B158DRAFT_1177at 1217.039 kb on + strand, within B158DRAFT_1177at 1217.039 kb on + strand, within B158DRAFT_1177at 1217.044 kb on + strand, within B158DRAFT_1177at 1217.061 kb on - strand, within B158DRAFT_1177at 1217.082 kb on + strand, within B158DRAFT_1177at 1217.123 kb on - strand, within B158DRAFT_1177at 1217.128 kb on - strandat 1217.128 kb on - strandat 1217.166 kb on + strandat 1217.168 kb on - strandat 1217.196 kb on - strandat 1217.316 kb on - strandat 1217.321 kb on - strandat 1217.388 kb on + strand, within B158DRAFT_1178at 1217.403 kb on - strand, within B158DRAFT_1178at 1217.412 kb on + strand, within B158DRAFT_1178at 1217.420 kb on - strand, within B158DRAFT_1178at 1217.422 kb on + strand, within B158DRAFT_1178at 1217.447 kb on + strand, within B158DRAFT_1178at 1217.478 kb on + strand, within B158DRAFT_1178at 1217.478 kb on + strand, within B158DRAFT_1178at 1217.491 kb on + strand, within B158DRAFT_1178at 1217.491 kb on + strand, within B158DRAFT_1178at 1217.491 kb on + strand, within B158DRAFT_1178at 1217.491 kb on + strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.499 kb on - strand, within B158DRAFT_1178at 1217.529 kb on + strand, within B158DRAFT_1178at 1217.529 kb on + strand, within B158DRAFT_1178at 1217.542 kb on + strand, within B158DRAFT_1178at 1217.581 kb on - strand, within B158DRAFT_1178at 1217.616 kb on + strand, within B158DRAFT_1178at 1217.623 kb on - strand, within B158DRAFT_1178at 1217.643 kb on + strand, within B158DRAFT_1178at 1217.659 kb on + strand, within B158DRAFT_1178at 1217.756 kb on - strandat 1217.756 kb on - strandat 1217.864 kb on - strandat 1217.950 kb on + strandat 1217.950 kb on + strandat 1217.964 kb on - strandat 1217.965 kb on - strandat 1218.012 kb on - strand, within B158DRAFT_1179at 1218.067 kb on + strand, within B158DRAFT_1179at 1218.067 kb on + strand, within B158DRAFT_1179at 1218.085 kb on - strand, within B158DRAFT_1179at 1218.126 kb on + strand, within B158DRAFT_1179at 1218.127 kb on + strand, within B158DRAFT_1179at 1218.134 kb on + strand, within B158DRAFT_1179at 1218.168 kb on + strand, within B158DRAFT_1179at 1218.223 kb on + strand, within B158DRAFT_1179at 1218.223 kb on + strand, within B158DRAFT_1179at 1218.231 kb on - strand, within B158DRAFT_1179at 1218.231 kb on - strand, within B158DRAFT_1179at 1218.291 kb on - strand, within B158DRAFT_1179at 1218.301 kb on + strand, within B158DRAFT_1179at 1218.301 kb on + strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.309 kb on - strand, within B158DRAFT_1179at 1218.314 kb on - strand, within B158DRAFT_1179at 1218.326 kb on + strand, within B158DRAFT_1179at 1218.498 kb on + strand, within B158DRAFT_1179at 1218.530 kb on + strand, within B158DRAFT_1179at 1218.549 kb on + strand, within B158DRAFT_1179at 1218.557 kb on - strand, within B158DRAFT_1179at 1218.557 kb on - strand, within B158DRAFT_1179at 1218.557 kb on - strand, within B158DRAFT_1179at 1218.613 kb on - strand, within B158DRAFT_1179at 1218.639 kb on + strand, within B158DRAFT_1179at 1218.691 kb on - strand, within B158DRAFT_1179at 1218.746 kb on + strand, within B158DRAFT_1179at 1218.766 kb on + strand, within B158DRAFT_1179at 1218.766 kb on + strand, within B158DRAFT_1179at 1218.766 kb on + strand, within B158DRAFT_1179at 1218.766 kb on + strand, within B158DRAFT_1179at 1218.767 kb on + strand, within B158DRAFT_1179

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
remove
1,216,286 - B158DRAFT_1177 0.15 +0.8
1,216,315 + B158DRAFT_1177 0.18 -0.6
1,216,321 + B158DRAFT_1177 0.18 -2.1
1,216,324 - B158DRAFT_1177 0.19 +0.7
1,216,329 - B158DRAFT_1177 0.19 -0.3
1,216,334 - B158DRAFT_1177 0.20 -0.5
1,216,447 - B158DRAFT_1177 0.30 +0.6
1,216,472 - B158DRAFT_1177 0.32 -0.5
1,216,531 + B158DRAFT_1177 0.37 -1.0
1,216,654 + B158DRAFT_1177 0.48 -0.1
1,216,654 + B158DRAFT_1177 0.48 +0.2
1,216,662 - B158DRAFT_1177 0.49 -0.6
1,216,662 - B158DRAFT_1177 0.49 +1.6
1,216,662 - B158DRAFT_1177 0.49 -0.0
1,216,668 + B158DRAFT_1177 0.49 -0.3
1,216,702 - B158DRAFT_1177 0.52 -0.1
1,216,741 + B158DRAFT_1177 0.56 -1.8
1,216,764 - B158DRAFT_1177 0.58 +1.0
1,216,798 + B158DRAFT_1177 0.61 -1.0
1,216,842 - B158DRAFT_1177 0.65 -1.0
1,216,876 + B158DRAFT_1177 0.68 -0.2
1,216,981 + B158DRAFT_1177 0.77 -0.5
1,216,994 + B158DRAFT_1177 0.78 -1.6
1,217,002 - B158DRAFT_1177 0.79 +0.6
1,217,002 - B158DRAFT_1177 0.79 -0.6
1,217,002 - B158DRAFT_1177 0.79 +0.4
1,217,012 - B158DRAFT_1177 0.80 -2.4
1,217,012 - B158DRAFT_1177 0.80 +0.2
1,217,012 - B158DRAFT_1177 0.80 +0.5
1,217,022 + B158DRAFT_1177 0.81 -0.5
1,217,022 + B158DRAFT_1177 0.81 +0.7
1,217,022 + B158DRAFT_1177 0.81 +0.4
1,217,039 + B158DRAFT_1177 0.82 -1.2
1,217,039 + B158DRAFT_1177 0.82 -0.8
1,217,044 + B158DRAFT_1177 0.83 +0.3
1,217,061 - B158DRAFT_1177 0.84 -1.1
1,217,082 + B158DRAFT_1177 0.86 -0.6
1,217,123 - B158DRAFT_1177 0.90 -0.4
1,217,128 - -0.5
1,217,128 - -0.1
1,217,166 + -1.5
1,217,168 - -0.5
1,217,196 - -0.5
1,217,316 - +0.0
1,217,321 - +0.2
1,217,388 + B158DRAFT_1178 0.22 -0.2
1,217,403 - B158DRAFT_1178 0.25 -0.6
1,217,412 + B158DRAFT_1178 0.27 -1.0
1,217,420 - B158DRAFT_1178 0.28 +1.1
1,217,422 + B158DRAFT_1178 0.29 -0.7
1,217,447 + B158DRAFT_1178 0.34 -0.8
1,217,478 + B158DRAFT_1178 0.40 -0.2
1,217,478 + B158DRAFT_1178 0.40 +0.2
1,217,491 + B158DRAFT_1178 0.43 -0.3
1,217,491 + B158DRAFT_1178 0.43 +0.4
1,217,491 + B158DRAFT_1178 0.43 -0.2
1,217,491 + B158DRAFT_1178 0.43 +1.5
1,217,499 - B158DRAFT_1178 0.44 -0.4
1,217,499 - B158DRAFT_1178 0.44 -0.7
1,217,499 - B158DRAFT_1178 0.44 -1.7
1,217,499 - B158DRAFT_1178 0.44 -0.1
1,217,499 - B158DRAFT_1178 0.44 -0.6
1,217,499 - B158DRAFT_1178 0.44 +0.6
1,217,499 - B158DRAFT_1178 0.44 -1.2
1,217,499 - B158DRAFT_1178 0.44 -0.2
1,217,529 + B158DRAFT_1178 0.50 -0.1
1,217,529 + B158DRAFT_1178 0.50 -1.4
1,217,542 + B158DRAFT_1178 0.53 -0.4
1,217,581 - B158DRAFT_1178 0.61 +1.3
1,217,616 + B158DRAFT_1178 0.68 -0.4
1,217,623 - B158DRAFT_1178 0.70 -0.7
1,217,643 + B158DRAFT_1178 0.74 +0.1
1,217,659 + B158DRAFT_1178 0.77 +0.5
1,217,756 - -0.0
1,217,756 - +0.1
1,217,864 - -0.8
1,217,950 + -0.1
1,217,950 + +0.0
1,217,964 - -0.3
1,217,965 - +0.1
1,218,012 - B158DRAFT_1179 0.12 +0.0
1,218,067 + B158DRAFT_1179 0.18 -0.4
1,218,067 + B158DRAFT_1179 0.18 -0.4
1,218,085 - B158DRAFT_1179 0.20 -0.1
1,218,126 + B158DRAFT_1179 0.24 -1.0
1,218,127 + B158DRAFT_1179 0.24 -0.7
1,218,134 + B158DRAFT_1179 0.25 -0.6
1,218,168 + B158DRAFT_1179 0.28 +0.0
1,218,223 + B158DRAFT_1179 0.34 +0.1
1,218,223 + B158DRAFT_1179 0.34 -0.0
1,218,231 - B158DRAFT_1179 0.34 +2.0
1,218,231 - B158DRAFT_1179 0.34 +0.7
1,218,291 - B158DRAFT_1179 0.40 -0.3
1,218,301 + B158DRAFT_1179 0.41 -0.2
1,218,301 + B158DRAFT_1179 0.41 -0.5
1,218,309 - B158DRAFT_1179 0.42 -1.3
1,218,309 - B158DRAFT_1179 0.42 +0.4
1,218,309 - B158DRAFT_1179 0.42 -0.5
1,218,309 - B158DRAFT_1179 0.42 -0.2
1,218,309 - B158DRAFT_1179 0.42 +0.9
1,218,309 - B158DRAFT_1179 0.42 +0.3
1,218,309 - B158DRAFT_1179 0.42 -0.2
1,218,309 - B158DRAFT_1179 0.42 -0.4
1,218,314 - B158DRAFT_1179 0.43 -0.4
1,218,326 + B158DRAFT_1179 0.44 -1.0
1,218,498 + B158DRAFT_1179 0.61 -0.2
1,218,530 + B158DRAFT_1179 0.64 -0.3
1,218,549 + B158DRAFT_1179 0.66 +0.2
1,218,557 - B158DRAFT_1179 0.67 -0.7
1,218,557 - B158DRAFT_1179 0.67 -0.9
1,218,557 - B158DRAFT_1179 0.67 +0.8
1,218,613 - B158DRAFT_1179 0.73 -0.8
1,218,639 + B158DRAFT_1179 0.75 -0.1
1,218,691 - B158DRAFT_1179 0.81 +0.2
1,218,746 + B158DRAFT_1179 0.86 -0.1
1,218,766 + B158DRAFT_1179 0.88 -0.6
1,218,766 + B158DRAFT_1179 0.88 -0.8
1,218,766 + B158DRAFT_1179 0.88 -1.1
1,218,766 + B158DRAFT_1179 0.88 -1.0
1,218,767 + B158DRAFT_1179 0.88 -0.6

Or see this region's nucleotide sequence