Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1022

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1020 and B158DRAFT_1021 are separated by 89 nucleotidesB158DRAFT_1021 and B158DRAFT_1022 are separated by 168 nucleotidesB158DRAFT_1022 and B158DRAFT_1023 are separated by 78 nucleotidesB158DRAFT_1023 and B158DRAFT_1024 are separated by 118 nucleotides B158DRAFT_1020: B158DRAFT_1020 - UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54), at 1,061,372 to 1,062,088 _1020 B158DRAFT_1021: B158DRAFT_1021 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 1,062,178 to 1,062,693 _1021 B158DRAFT_1022: B158DRAFT_1022 - cysteinyl-tRNA synthetase (EC 6.1.1.16), at 1,062,862 to 1,064,259 _1022 B158DRAFT_1023: B158DRAFT_1023 - Helix-turn-helix., at 1,064,338 to 1,065,081 _1023 B158DRAFT_1024: B158DRAFT_1024 - Phosphatidylglycerophosphate synthase, at 1,065,200 to 1,065,790 _1024 Position (kb) 1062 1063 1064 1065Strain fitness (log2 ratio) -1 0 1 2at 1062.165 kb on - strandat 1062.169 kb on + strandat 1062.177 kb on - strandat 1062.177 kb on - strandat 1062.177 kb on - strandat 1062.182 kb on - strandat 1062.183 kb on - strandat 1062.237 kb on - strand, within B158DRAFT_1021at 1062.248 kb on - strand, within B158DRAFT_1021at 1062.291 kb on - strand, within B158DRAFT_1021at 1062.291 kb on - strand, within B158DRAFT_1021at 1062.326 kb on - strand, within B158DRAFT_1021at 1062.327 kb on - strand, within B158DRAFT_1021at 1062.327 kb on - strand, within B158DRAFT_1021at 1062.413 kb on - strand, within B158DRAFT_1021at 1062.415 kb on - strand, within B158DRAFT_1021at 1062.426 kb on + strand, within B158DRAFT_1021at 1062.474 kb on - strand, within B158DRAFT_1021at 1062.528 kb on - strand, within B158DRAFT_1021at 1062.560 kb on - strand, within B158DRAFT_1021at 1062.582 kb on - strand, within B158DRAFT_1021at 1062.606 kb on - strand, within B158DRAFT_1021at 1062.606 kb on - strand, within B158DRAFT_1021at 1062.615 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.746 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strandat 1064.376 kb on + strandat 1064.397 kb on + strandat 1064.397 kb on + strandat 1064.476 kb on - strand, within B158DRAFT_1023at 1064.476 kb on - strand, within B158DRAFT_1023at 1064.613 kb on - strand, within B158DRAFT_1023at 1064.619 kb on - strand, within B158DRAFT_1023at 1064.767 kb on + strand, within B158DRAFT_1023at 1064.915 kb on + strand, within B158DRAFT_1023at 1064.996 kb on + strand, within B158DRAFT_1023at 1064.996 kb on + strand, within B158DRAFT_1023at 1064.996 kb on + strand, within B158DRAFT_1023at 1064.996 kb on + strand, within B158DRAFT_1023at 1064.997 kb on - strand, within B158DRAFT_1023at 1064.997 kb on - strand, within B158DRAFT_1023at 1065.004 kb on - strand, within B158DRAFT_1023at 1065.004 kb on - strand, within B158DRAFT_1023at 1065.004 kb on - strand, within B158DRAFT_1023at 1065.004 kb on - strand, within B158DRAFT_1023at 1065.006 kb on + strand, within B158DRAFT_1023at 1065.029 kb on + strandat 1065.037 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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1,062,165 - +0.9
1,062,169 + +1.8
1,062,177 - -0.1
1,062,177 - -0.1
1,062,177 - -0.0
1,062,182 - -0.7
1,062,183 - -0.5
1,062,237 - B158DRAFT_1021 0.11 -0.3
1,062,248 - B158DRAFT_1021 0.14 -0.8
1,062,291 - B158DRAFT_1021 0.22 -0.2
1,062,291 - B158DRAFT_1021 0.22 +0.4
1,062,326 - B158DRAFT_1021 0.29 -0.6
1,062,327 - B158DRAFT_1021 0.29 +0.8
1,062,327 - B158DRAFT_1021 0.29 -0.9
1,062,413 - B158DRAFT_1021 0.46 +1.7
1,062,415 - B158DRAFT_1021 0.46 -0.0
1,062,426 + B158DRAFT_1021 0.48 -0.8
1,062,474 - B158DRAFT_1021 0.57 -0.0
1,062,528 - B158DRAFT_1021 0.68 +0.1
1,062,560 - B158DRAFT_1021 0.74 +0.8
1,062,582 - B158DRAFT_1021 0.78 +0.8
1,062,606 - B158DRAFT_1021 0.83 -1.7
1,062,606 - B158DRAFT_1021 0.83 -0.5
1,062,615 - B158DRAFT_1021 0.85 +0.6
1,062,616 - B158DRAFT_1021 0.85 -0.9
1,062,616 - B158DRAFT_1021 0.85 +0.3
1,062,616 - B158DRAFT_1021 0.85 -1.1
1,062,616 - B158DRAFT_1021 0.85 +0.3
1,062,616 - B158DRAFT_1021 0.85 +0.6
1,062,746 - -1.2
1,062,761 - -0.4
1,062,761 - +0.1
1,062,761 - +1.3
1,062,761 - +0.2
1,062,761 - -0.0
1,064,376 + -0.1
1,064,397 + -0.6
1,064,397 + -0.2
1,064,476 - B158DRAFT_1023 0.19 -0.2
1,064,476 - B158DRAFT_1023 0.19 -0.7
1,064,613 - B158DRAFT_1023 0.37 +1.6
1,064,619 - B158DRAFT_1023 0.38 -0.7
1,064,767 + B158DRAFT_1023 0.58 +0.4
1,064,915 + B158DRAFT_1023 0.78 +0.1
1,064,996 + B158DRAFT_1023 0.88 +0.9
1,064,996 + B158DRAFT_1023 0.88 +1.0
1,064,996 + B158DRAFT_1023 0.88 -0.0
1,064,996 + B158DRAFT_1023 0.88 -0.2
1,064,997 - B158DRAFT_1023 0.89 -0.4
1,064,997 - B158DRAFT_1023 0.89 -1.6
1,065,004 - B158DRAFT_1023 0.90 +0.1
1,065,004 - B158DRAFT_1023 0.90 -0.1
1,065,004 - B158DRAFT_1023 0.90 -0.6
1,065,004 - B158DRAFT_1023 0.90 -0.3
1,065,006 + B158DRAFT_1023 0.90 -0.2
1,065,029 + -1.1
1,065,037 - -0.4

Or see this region's nucleotide sequence