Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1020

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1018 and B158DRAFT_1019 overlap by 4 nucleotidesB158DRAFT_1019 and B158DRAFT_1020 are separated by 24 nucleotidesB158DRAFT_1020 and B158DRAFT_1021 are separated by 89 nucleotidesB158DRAFT_1021 and B158DRAFT_1022 are separated by 168 nucleotides B158DRAFT_1018: B158DRAFT_1018 - Uncharacterized protein conserved in bacteria, at 1,060,068 to 1,060,634 _1018 B158DRAFT_1019: B158DRAFT_1019 - hypothetical protein, at 1,060,631 to 1,061,347 _1019 B158DRAFT_1020: B158DRAFT_1020 - UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54), at 1,061,372 to 1,062,088 _1020 B158DRAFT_1021: B158DRAFT_1021 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 1,062,178 to 1,062,693 _1021 B158DRAFT_1022: B158DRAFT_1022 - cysteinyl-tRNA synthetase (EC 6.1.1.16), at 1,062,862 to 1,064,259 _1022 Position (kb) 1061 1062 1063Strain fitness (log2 ratio) -2 -1 0 1 2at 1060.457 kb on - strand, within B158DRAFT_1018at 1060.457 kb on - strand, within B158DRAFT_1018at 1060.523 kb on + strand, within B158DRAFT_1018at 1060.582 kb on - strandat 1060.592 kb on - strandat 1060.671 kb on - strandat 1060.772 kb on + strand, within B158DRAFT_1019at 1060.778 kb on + strand, within B158DRAFT_1019at 1060.888 kb on + strand, within B158DRAFT_1019at 1060.942 kb on + strand, within B158DRAFT_1019at 1061.095 kb on + strand, within B158DRAFT_1019at 1061.095 kb on + strand, within B158DRAFT_1019at 1061.200 kb on + strand, within B158DRAFT_1019at 1061.241 kb on + strand, within B158DRAFT_1019at 1061.277 kb on - strandat 1061.297 kb on + strandat 1061.323 kb on + strandat 1061.323 kb on + strandat 1061.331 kb on - strandat 1061.331 kb on - strandat 1061.331 kb on - strandat 1061.331 kb on - strandat 1061.331 kb on - strandat 1061.331 kb on - strandat 1061.331 kb on - strandat 1061.331 kb on - strandat 1062.165 kb on - strandat 1062.169 kb on + strandat 1062.177 kb on - strandat 1062.177 kb on - strandat 1062.177 kb on - strandat 1062.182 kb on - strandat 1062.183 kb on - strandat 1062.237 kb on - strand, within B158DRAFT_1021at 1062.248 kb on - strand, within B158DRAFT_1021at 1062.291 kb on - strand, within B158DRAFT_1021at 1062.291 kb on - strand, within B158DRAFT_1021at 1062.326 kb on - strand, within B158DRAFT_1021at 1062.327 kb on - strand, within B158DRAFT_1021at 1062.327 kb on - strand, within B158DRAFT_1021at 1062.413 kb on - strand, within B158DRAFT_1021at 1062.415 kb on - strand, within B158DRAFT_1021at 1062.426 kb on + strand, within B158DRAFT_1021at 1062.474 kb on - strand, within B158DRAFT_1021at 1062.528 kb on - strand, within B158DRAFT_1021at 1062.560 kb on - strand, within B158DRAFT_1021at 1062.582 kb on - strand, within B158DRAFT_1021at 1062.606 kb on - strand, within B158DRAFT_1021at 1062.606 kb on - strand, within B158DRAFT_1021at 1062.615 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.616 kb on - strand, within B158DRAFT_1021at 1062.746 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strandat 1062.761 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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1,060,457 - B158DRAFT_1018 0.69 -0.2
1,060,457 - B158DRAFT_1018 0.69 -0.0
1,060,523 + B158DRAFT_1018 0.80 -0.5
1,060,582 - +0.4
1,060,592 - -0.5
1,060,671 - +0.1
1,060,772 + B158DRAFT_1019 0.20 -1.8
1,060,778 + B158DRAFT_1019 0.21 -0.3
1,060,888 + B158DRAFT_1019 0.36 -0.1
1,060,942 + B158DRAFT_1019 0.43 -0.6
1,061,095 + B158DRAFT_1019 0.65 -0.3
1,061,095 + B158DRAFT_1019 0.65 +0.5
1,061,200 + B158DRAFT_1019 0.79 -1.3
1,061,241 + B158DRAFT_1019 0.85 +0.4
1,061,277 - -0.1
1,061,297 + -0.8
1,061,323 + -1.1
1,061,323 + +0.1
1,061,331 - -1.0
1,061,331 - +0.3
1,061,331 - +0.0
1,061,331 - -0.8
1,061,331 - -0.5
1,061,331 - -1.4
1,061,331 - +0.3
1,061,331 - +0.4
1,062,165 - +0.9
1,062,169 + +1.8
1,062,177 - -0.1
1,062,177 - -0.1
1,062,177 - -0.0
1,062,182 - -0.7
1,062,183 - -0.5
1,062,237 - B158DRAFT_1021 0.11 -0.3
1,062,248 - B158DRAFT_1021 0.14 -0.8
1,062,291 - B158DRAFT_1021 0.22 -0.2
1,062,291 - B158DRAFT_1021 0.22 +0.4
1,062,326 - B158DRAFT_1021 0.29 -0.6
1,062,327 - B158DRAFT_1021 0.29 +0.8
1,062,327 - B158DRAFT_1021 0.29 -0.9
1,062,413 - B158DRAFT_1021 0.46 +1.7
1,062,415 - B158DRAFT_1021 0.46 -0.0
1,062,426 + B158DRAFT_1021 0.48 -0.8
1,062,474 - B158DRAFT_1021 0.57 -0.0
1,062,528 - B158DRAFT_1021 0.68 +0.1
1,062,560 - B158DRAFT_1021 0.74 +0.8
1,062,582 - B158DRAFT_1021 0.78 +0.8
1,062,606 - B158DRAFT_1021 0.83 -1.7
1,062,606 - B158DRAFT_1021 0.83 -0.5
1,062,615 - B158DRAFT_1021 0.85 +0.6
1,062,616 - B158DRAFT_1021 0.85 -0.9
1,062,616 - B158DRAFT_1021 0.85 +0.3
1,062,616 - B158DRAFT_1021 0.85 -1.1
1,062,616 - B158DRAFT_1021 0.85 +0.3
1,062,616 - B158DRAFT_1021 0.85 +0.6
1,062,746 - -1.2
1,062,761 - -0.4
1,062,761 - +0.1
1,062,761 - +1.3
1,062,761 - +0.2
1,062,761 - -0.0

Or see this region's nucleotide sequence