Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0739

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0737 and B158DRAFT_0738 are separated by 10 nucleotidesB158DRAFT_0738 and B158DRAFT_0739 overlap by 1 nucleotidesB158DRAFT_0739 and B158DRAFT_0740 are separated by 20 nucleotidesB158DRAFT_0740 and B158DRAFT_0741 are separated by 23 nucleotidesB158DRAFT_0741 and B158DRAFT_0742 are separated by 35 nucleotides B158DRAFT_0737: B158DRAFT_0737 - Uncharacterized protein, possibly involved in aromatic compounds catabolism, at 742,952 to 743,413 _0737 B158DRAFT_0738: B158DRAFT_0738 - Twin arginine targeting (Tat) protein translocase TatC, at 743,424 to 744,200 _0738 B158DRAFT_0739: B158DRAFT_0739 - twin arginine-targeting protein translocase TatB, at 744,200 to 744,574 _0739 B158DRAFT_0740: B158DRAFT_0740 - twin arginine-targeting protein translocase, TatA/E family, at 744,595 to 744,837 _0740 B158DRAFT_0741: B158DRAFT_0741 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 744,861 to 745,199 _0741 B158DRAFT_0742: B158DRAFT_0742 - 2-octaprenylphenol hydroxylase (EC 1.14.13.-), at 745,235 to 746,881 _0742 Position (kb) 744 745Strain fitness (log2 ratio) -1 0 1 2 3at 743.247 kb on + strand, within B158DRAFT_0737at 743.247 kb on + strand, within B158DRAFT_0737at 743.254 kb on + strand, within B158DRAFT_0737at 743.339 kb on + strand, within B158DRAFT_0737at 743.365 kb on - strand, within B158DRAFT_0737at 743.422 kb on + strandat 743.446 kb on - strandat 743.482 kb on + strandat 743.490 kb on + strandat 743.499 kb on - strandat 743.572 kb on + strand, within B158DRAFT_0738at 743.649 kb on + strand, within B158DRAFT_0738at 743.662 kb on - strand, within B158DRAFT_0738at 743.710 kb on + strand, within B158DRAFT_0738at 743.755 kb on + strand, within B158DRAFT_0738at 743.842 kb on + strand, within B158DRAFT_0738at 743.900 kb on + strand, within B158DRAFT_0738at 743.900 kb on + strand, within B158DRAFT_0738at 744.141 kb on - strandat 744.215 kb on - strandat 744.225 kb on - strandat 744.263 kb on - strand, within B158DRAFT_0739at 744.282 kb on - strand, within B158DRAFT_0739at 744.294 kb on - strand, within B158DRAFT_0739at 744.345 kb on + strand, within B158DRAFT_0739at 744.353 kb on - strand, within B158DRAFT_0739at 744.353 kb on - strand, within B158DRAFT_0739at 744.489 kb on + strand, within B158DRAFT_0739at 744.489 kb on + strand, within B158DRAFT_0739at 744.489 kb on + strand, within B158DRAFT_0739at 744.497 kb on - strand, within B158DRAFT_0739at 744.497 kb on - strand, within B158DRAFT_0739at 744.497 kb on - strand, within B158DRAFT_0739at 744.623 kb on - strand, within B158DRAFT_0740at 744.623 kb on - strand, within B158DRAFT_0740at 744.651 kb on + strand, within B158DRAFT_0740at 744.651 kb on + strand, within B158DRAFT_0740at 744.805 kb on + strand, within B158DRAFT_0740at 744.853 kb on - strandat 744.917 kb on + strand, within B158DRAFT_0741at 744.925 kb on - strand, within B158DRAFT_0741at 744.974 kb on - strand, within B158DRAFT_0741at 745.067 kb on + strand, within B158DRAFT_0741at 745.089 kb on + strand, within B158DRAFT_0741at 745.089 kb on + strand, within B158DRAFT_0741at 745.097 kb on - strand, within B158DRAFT_0741at 745.481 kb on + strand, within B158DRAFT_0742

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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743,247 + B158DRAFT_0737 0.64 -0.6
743,247 + B158DRAFT_0737 0.64 +0.2
743,254 + B158DRAFT_0737 0.65 +0.2
743,339 + B158DRAFT_0737 0.84 +0.2
743,365 - B158DRAFT_0737 0.89 -0.7
743,422 + -0.2
743,446 - -0.6
743,482 + -0.6
743,490 + -0.5
743,499 - +1.5
743,572 + B158DRAFT_0738 0.19 +0.5
743,649 + B158DRAFT_0738 0.29 +1.4
743,662 - B158DRAFT_0738 0.31 +2.0
743,710 + B158DRAFT_0738 0.37 +1.9
743,755 + B158DRAFT_0738 0.43 +1.8
743,842 + B158DRAFT_0738 0.54 +1.0
743,900 + B158DRAFT_0738 0.61 +1.1
743,900 + B158DRAFT_0738 0.61 +2.2
744,141 - +1.4
744,215 - +0.2
744,225 - +0.1
744,263 - B158DRAFT_0739 0.17 +0.2
744,282 - B158DRAFT_0739 0.22 +0.4
744,294 - B158DRAFT_0739 0.25 +0.2
744,345 + B158DRAFT_0739 0.39 +2.1
744,353 - B158DRAFT_0739 0.41 +1.5
744,353 - B158DRAFT_0739 0.41 +1.8
744,489 + B158DRAFT_0739 0.77 +2.0
744,489 + B158DRAFT_0739 0.77 +1.3
744,489 + B158DRAFT_0739 0.77 +2.6
744,497 - B158DRAFT_0739 0.79 +0.7
744,497 - B158DRAFT_0739 0.79 -1.1
744,497 - B158DRAFT_0739 0.79 +1.8
744,623 - B158DRAFT_0740 0.12 +1.1
744,623 - B158DRAFT_0740 0.12 +0.4
744,651 + B158DRAFT_0740 0.23 +1.2
744,651 + B158DRAFT_0740 0.23 +1.4
744,805 + B158DRAFT_0740 0.86 +2.0
744,853 - +0.8
744,917 + B158DRAFT_0741 0.17 +0.5
744,925 - B158DRAFT_0741 0.19 +3.5
744,974 - B158DRAFT_0741 0.33 -0.3
745,067 + B158DRAFT_0741 0.61 -0.2
745,089 + B158DRAFT_0741 0.67 +0.6
745,089 + B158DRAFT_0741 0.67 +0.6
745,097 - B158DRAFT_0741 0.70 -0.8
745,481 + B158DRAFT_0742 0.15 +0.3

Or see this region's nucleotide sequence