Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0446

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0444 and B158DRAFT_0445 are separated by 142 nucleotidesB158DRAFT_0445 and B158DRAFT_0446 are separated by 29 nucleotidesB158DRAFT_0446 and B158DRAFT_0447 are separated by 70 nucleotidesB158DRAFT_0447 and B158DRAFT_0448 are separated by 5 nucleotides B158DRAFT_0444: B158DRAFT_0444 - hypothetical protein, at 445,928 to 446,884 _0444 B158DRAFT_0445: B158DRAFT_0445 - Parvulin-like peptidyl-prolyl isomerase, at 447,027 to 447,314 _0445 B158DRAFT_0446: B158DRAFT_0446 - Adenine-specific DNA methylase, at 447,344 to 448,060 _0446 B158DRAFT_0447: B158DRAFT_0447 - Pseudouridylate synthases, 23S RNA-specific, at 448,131 to 448,988 _0447 B158DRAFT_0448: B158DRAFT_0448 - Uracil-DNA glycosylase, at 448,994 to 449,590 _0448 Position (kb) 447 448 449Strain fitness (log2 ratio) -2 -1 0 1 2 3at 446.521 kb on + strand, within B158DRAFT_0444at 446.523 kb on + strand, within B158DRAFT_0444at 446.529 kb on - strand, within B158DRAFT_0444at 446.594 kb on - strand, within B158DRAFT_0444at 446.656 kb on - strand, within B158DRAFT_0444at 446.688 kb on + strand, within B158DRAFT_0444at 446.722 kb on + strand, within B158DRAFT_0444at 446.733 kb on + strand, within B158DRAFT_0444at 446.763 kb on - strand, within B158DRAFT_0444at 446.776 kb on - strand, within B158DRAFT_0444at 446.824 kb on - strandat 447.046 kb on + strandat 447.072 kb on + strand, within B158DRAFT_0445at 447.102 kb on - strand, within B158DRAFT_0445at 447.135 kb on + strand, within B158DRAFT_0445at 447.135 kb on + strand, within B158DRAFT_0445at 447.136 kb on + strand, within B158DRAFT_0445at 447.143 kb on - strand, within B158DRAFT_0445at 447.143 kb on - strand, within B158DRAFT_0445at 447.277 kb on + strand, within B158DRAFT_0445at 447.291 kb on + strandat 447.299 kb on - strandat 447.299 kb on - strandat 447.330 kb on - strandat 447.381 kb on - strandat 447.447 kb on + strand, within B158DRAFT_0446at 447.476 kb on + strand, within B158DRAFT_0446at 447.484 kb on - strand, within B158DRAFT_0446at 447.484 kb on - strand, within B158DRAFT_0446at 447.511 kb on + strand, within B158DRAFT_0446at 447.628 kb on + strand, within B158DRAFT_0446at 447.646 kb on - strand, within B158DRAFT_0446at 447.688 kb on + strand, within B158DRAFT_0446at 447.693 kb on + strand, within B158DRAFT_0446at 447.738 kb on + strand, within B158DRAFT_0446at 447.764 kb on - strand, within B158DRAFT_0446at 447.793 kb on + strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.809 kb on + strand, within B158DRAFT_0446at 447.817 kb on - strand, within B158DRAFT_0446at 447.937 kb on - strand, within B158DRAFT_0446at 447.960 kb on + strand, within B158DRAFT_0446at 448.032 kb on + strandat 448.033 kb on + strandat 448.075 kb on + strandat 448.186 kb on + strandat 448.193 kb on - strandat 448.250 kb on - strand, within B158DRAFT_0447at 448.392 kb on - strand, within B158DRAFT_0447at 448.417 kb on + strand, within B158DRAFT_0447at 448.456 kb on + strand, within B158DRAFT_0447at 448.485 kb on + strand, within B158DRAFT_0447at 448.486 kb on + strand, within B158DRAFT_0447at 448.486 kb on + strand, within B158DRAFT_0447at 448.486 kb on + strand, within B158DRAFT_0447at 448.494 kb on - strand, within B158DRAFT_0447at 448.523 kb on + strand, within B158DRAFT_0447at 448.553 kb on + strand, within B158DRAFT_0447at 448.558 kb on + strand, within B158DRAFT_0447at 448.583 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.618 kb on - strand, within B158DRAFT_0447at 448.636 kb on - strand, within B158DRAFT_0447at 448.682 kb on + strand, within B158DRAFT_0447at 448.779 kb on + strand, within B158DRAFT_0447at 448.835 kb on - strand, within B158DRAFT_0447at 448.842 kb on + strand, within B158DRAFT_0447at 448.842 kb on + strand, within B158DRAFT_0447at 448.880 kb on + strand, within B158DRAFT_0447at 448.891 kb on - strand, within B158DRAFT_0447at 448.893 kb on + strand, within B158DRAFT_0447at 448.901 kb on + strand, within B158DRAFT_0447at 448.909 kb on - strandat 448.909 kb on - strandat 448.909 kb on - strandat 448.911 kb on + strandat 448.957 kb on - strandat 448.957 kb on - strandat 448.971 kb on - strandat 448.971 kb on - strandat 449.029 kb on + strandat 449.038 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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446,521 + B158DRAFT_0444 0.62 -0.2
446,523 + B158DRAFT_0444 0.62 -0.9
446,529 - B158DRAFT_0444 0.63 +3.6
446,594 - B158DRAFT_0444 0.70 -1.2
446,656 - B158DRAFT_0444 0.76 -0.2
446,688 + B158DRAFT_0444 0.79 -0.9
446,722 + B158DRAFT_0444 0.83 -0.5
446,733 + B158DRAFT_0444 0.84 +0.1
446,763 - B158DRAFT_0444 0.87 -0.8
446,776 - B158DRAFT_0444 0.89 +0.1
446,824 - -0.1
447,046 + -1.0
447,072 + B158DRAFT_0445 0.16 +2.6
447,102 - B158DRAFT_0445 0.26 -0.9
447,135 + B158DRAFT_0445 0.38 -0.7
447,135 + B158DRAFT_0445 0.38 -2.1
447,136 + B158DRAFT_0445 0.38 -0.0
447,143 - B158DRAFT_0445 0.40 +0.3
447,143 - B158DRAFT_0445 0.40 -0.5
447,277 + B158DRAFT_0445 0.87 +1.9
447,291 + -0.2
447,299 - -0.7
447,299 - -0.8
447,330 - +0.9
447,381 - +0.5
447,447 + B158DRAFT_0446 0.14 -0.5
447,476 + B158DRAFT_0446 0.18 -0.1
447,484 - B158DRAFT_0446 0.20 +0.1
447,484 - B158DRAFT_0446 0.20 -0.8
447,511 + B158DRAFT_0446 0.23 +0.4
447,628 + B158DRAFT_0446 0.40 -0.9
447,646 - B158DRAFT_0446 0.42 +0.5
447,688 + B158DRAFT_0446 0.48 +0.3
447,693 + B158DRAFT_0446 0.49 -0.3
447,738 + B158DRAFT_0446 0.55 -0.2
447,764 - B158DRAFT_0446 0.59 -0.6
447,793 + B158DRAFT_0446 0.63 -0.1
447,801 - B158DRAFT_0446 0.64 -0.7
447,801 - B158DRAFT_0446 0.64 -0.6
447,801 - B158DRAFT_0446 0.64 +0.2
447,801 - B158DRAFT_0446 0.64 +2.4
447,801 - B158DRAFT_0446 0.64 +0.5
447,801 - B158DRAFT_0446 0.64 -0.2
447,801 - B158DRAFT_0446 0.64 -0.5
447,801 - B158DRAFT_0446 0.64 -1.5
447,801 - B158DRAFT_0446 0.64 +0.4
447,801 - B158DRAFT_0446 0.64 -0.4
447,809 + B158DRAFT_0446 0.65 -0.7
447,817 - B158DRAFT_0446 0.66 -0.4
447,937 - B158DRAFT_0446 0.83 -1.0
447,960 + B158DRAFT_0446 0.86 -0.0
448,032 + -0.1
448,033 + +0.1
448,075 + +1.6
448,186 + -0.3
448,193 - +1.9
448,250 - B158DRAFT_0447 0.14 -0.8
448,392 - B158DRAFT_0447 0.30 -0.0
448,417 + B158DRAFT_0447 0.33 -0.7
448,456 + B158DRAFT_0447 0.38 -0.5
448,485 + B158DRAFT_0447 0.41 +1.5
448,486 + B158DRAFT_0447 0.41 +0.0
448,486 + B158DRAFT_0447 0.41 -0.6
448,486 + B158DRAFT_0447 0.41 +0.2
448,494 - B158DRAFT_0447 0.42 -0.4
448,523 + B158DRAFT_0447 0.46 -0.0
448,553 + B158DRAFT_0447 0.49 -0.6
448,558 + B158DRAFT_0447 0.50 -0.3
448,583 + B158DRAFT_0447 0.53 -1.7
448,590 + B158DRAFT_0447 0.53 -0.3
448,590 + B158DRAFT_0447 0.53 -0.6
448,590 + B158DRAFT_0447 0.53 -0.7
448,590 + B158DRAFT_0447 0.53 -0.8
448,598 - B158DRAFT_0447 0.54 -1.3
448,598 - B158DRAFT_0447 0.54 -0.5
448,598 - B158DRAFT_0447 0.54 +0.2
448,598 - B158DRAFT_0447 0.54 -0.4
448,618 - B158DRAFT_0447 0.57 +0.0
448,636 - B158DRAFT_0447 0.59 -0.1
448,682 + B158DRAFT_0447 0.64 -0.6
448,779 + B158DRAFT_0447 0.76 -0.0
448,835 - B158DRAFT_0447 0.82 -0.1
448,842 + B158DRAFT_0447 0.83 -0.4
448,842 + B158DRAFT_0447 0.83 +0.7
448,880 + B158DRAFT_0447 0.87 -0.5
448,891 - B158DRAFT_0447 0.89 -0.3
448,893 + B158DRAFT_0447 0.89 +0.0
448,901 + B158DRAFT_0447 0.90 +0.1
448,909 - +0.8
448,909 - +0.6
448,909 - -0.3
448,911 + -1.3
448,957 - +0.4
448,957 - +0.9
448,971 - -0.4
448,971 - +0.1
449,029 + -1.4
449,038 - -1.6

Or see this region's nucleotide sequence