Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0402

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0400 and B158DRAFT_0401 are separated by 85 nucleotidesB158DRAFT_0401 and B158DRAFT_0402 are separated by 213 nucleotidesB158DRAFT_0402 and B158DRAFT_0403 are separated by 199 nucleotidesB158DRAFT_0403 and B158DRAFT_0404 are separated by 9 nucleotides B158DRAFT_0400: B158DRAFT_0400 - DNA protecting protein DprA, at 406,069 to 407,160 _0400 B158DRAFT_0401: B158DRAFT_0401 - Uncharacterized protein conserved in bacteria, at 407,246 to 407,725 _0401 B158DRAFT_0402: B158DRAFT_0402 - Thiol-disulfide isomerase and thioredoxins, at 407,939 to 408,781 _0402 B158DRAFT_0403: B158DRAFT_0403 - Putative translation factor (SUA5), at 408,981 to 409,544 _0403 B158DRAFT_0404: B158DRAFT_0404 - coproporphyrinogen oxidase (EC 1.3.3.3), at 409,554 to 410,480 _0404 Position (kb) 407 408 409Strain fitness (log2 ratio) -2 -1 0 1 2at 407.048 kb on + strand, within B158DRAFT_0400at 407.048 kb on + strand, within B158DRAFT_0400at 407.056 kb on - strandat 407.056 kb on - strandat 407.056 kb on - strandat 407.056 kb on - strandat 407.056 kb on - strandat 407.056 kb on - strandat 407.066 kb on - strandat 407.087 kb on + strandat 407.215 kb on + strandat 407.223 kb on - strandat 407.223 kb on - strandat 407.229 kb on + strandat 407.229 kb on + strandat 407.229 kb on + strandat 407.229 kb on + strandat 407.229 kb on + strandat 407.229 kb on + strandat 407.237 kb on - strandat 407.237 kb on - strandat 407.237 kb on - strandat 407.237 kb on - strandat 407.237 kb on - strandat 407.237 kb on - strandat 407.237 kb on - strandat 407.255 kb on + strandat 407.418 kb on + strand, within B158DRAFT_0401at 407.453 kb on + strand, within B158DRAFT_0401at 407.477 kb on + strand, within B158DRAFT_0401at 407.504 kb on + strand, within B158DRAFT_0401at 407.510 kb on + strand, within B158DRAFT_0401at 407.511 kb on + strand, within B158DRAFT_0401at 407.523 kb on + strand, within B158DRAFT_0401at 407.523 kb on + strand, within B158DRAFT_0401at 407.523 kb on + strand, within B158DRAFT_0401at 407.523 kb on + strand, within B158DRAFT_0401at 407.523 kb on + strand, within B158DRAFT_0401at 407.523 kb on + strand, within B158DRAFT_0401at 407.523 kb on + strand, within B158DRAFT_0401at 407.526 kb on - strand, within B158DRAFT_0401at 407.531 kb on - strand, within B158DRAFT_0401at 407.531 kb on - strand, within B158DRAFT_0401at 407.531 kb on - strand, within B158DRAFT_0401at 407.531 kb on - strand, within B158DRAFT_0401at 407.531 kb on - strand, within B158DRAFT_0401at 407.712 kb on - strandat 407.742 kb on + strandat 407.745 kb on - strandat 407.755 kb on + strandat 407.755 kb on + strandat 407.755 kb on + strandat 407.755 kb on + strandat 407.763 kb on - strandat 407.763 kb on - strandat 407.777 kb on + strandat 407.777 kb on + strandat 407.785 kb on - strandat 407.786 kb on - strandat 407.859 kb on - strandat 407.859 kb on - strandat 407.895 kb on + strandat 407.957 kb on + strandat 408.012 kb on + strandat 408.012 kb on + strandat 408.106 kb on + strand, within B158DRAFT_0402at 408.106 kb on + strand, within B158DRAFT_0402at 408.119 kb on + strand, within B158DRAFT_0402at 408.119 kb on + strand, within B158DRAFT_0402at 408.119 kb on + strand, within B158DRAFT_0402at 408.127 kb on - strand, within B158DRAFT_0402at 408.127 kb on - strand, within B158DRAFT_0402at 408.127 kb on - strand, within B158DRAFT_0402at 408.132 kb on - strand, within B158DRAFT_0402at 408.132 kb on - strand, within B158DRAFT_0402at 408.209 kb on + strand, within B158DRAFT_0402at 408.219 kb on + strand, within B158DRAFT_0402at 408.260 kb on + strand, within B158DRAFT_0402at 408.268 kb on - strand, within B158DRAFT_0402at 408.289 kb on - strand, within B158DRAFT_0402at 408.299 kb on - strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.328 kb on + strand, within B158DRAFT_0402at 408.336 kb on - strand, within B158DRAFT_0402at 408.336 kb on - strand, within B158DRAFT_0402at 408.336 kb on - strand, within B158DRAFT_0402at 408.338 kb on + strand, within B158DRAFT_0402at 408.338 kb on + strand, within B158DRAFT_0402at 408.346 kb on - strand, within B158DRAFT_0402at 408.381 kb on - strand, within B158DRAFT_0402at 408.399 kb on + strand, within B158DRAFT_0402at 408.404 kb on + strand, within B158DRAFT_0402at 408.407 kb on - strand, within B158DRAFT_0402at 408.414 kb on + strand, within B158DRAFT_0402at 408.422 kb on - strand, within B158DRAFT_0402at 408.448 kb on - strand, within B158DRAFT_0402at 408.530 kb on + strand, within B158DRAFT_0402at 408.537 kb on + strand, within B158DRAFT_0402at 408.583 kb on + strand, within B158DRAFT_0402at 408.589 kb on + strand, within B158DRAFT_0402at 408.591 kb on - strand, within B158DRAFT_0402at 408.597 kb on - strand, within B158DRAFT_0402at 408.611 kb on + strand, within B158DRAFT_0402at 408.611 kb on + strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.759 kb on + strandat 408.759 kb on + strandat 408.759 kb on + strandat 408.759 kb on + strandat 408.764 kb on + strandat 408.764 kb on + strandat 408.767 kb on - strandat 408.767 kb on - strandat 408.772 kb on - strandat 408.776 kb on + strandat 408.784 kb on - strandat 408.784 kb on - strandat 408.838 kb on - strandat 408.881 kb on + strandat 408.881 kb on + strandat 408.881 kb on + strandat 408.888 kb on + strandat 408.896 kb on - strandat 408.896 kb on - strandat 408.896 kb on - strandat 408.920 kb on + strandat 408.920 kb on + strandat 408.920 kb on + strandat 408.928 kb on - strandat 408.937 kb on - strandat 409.146 kb on + strand, within B158DRAFT_0403at 409.154 kb on - strand, within B158DRAFT_0403at 409.154 kb on - strand, within B158DRAFT_0403at 409.176 kb on - strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.182 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.204 kb on + strand, within B158DRAFT_0403at 409.212 kb on - strand, within B158DRAFT_0403at 409.212 kb on - strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.279 kb on + strand, within B158DRAFT_0403at 409.376 kb on + strand, within B158DRAFT_0403at 409.420 kb on + strand, within B158DRAFT_0403at 409.420 kb on + strand, within B158DRAFT_0403at 409.430 kb on + strand, within B158DRAFT_0403at 409.447 kb on + strand, within B158DRAFT_0403at 409.522 kb on + strandat 409.545 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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407,048 + B158DRAFT_0400 0.90 -0.7
407,048 + B158DRAFT_0400 0.90 +0.6
407,056 - -0.6
407,056 - -0.4
407,056 - -0.1
407,056 - +2.0
407,056 - -1.9
407,056 - -0.2
407,066 - +2.3
407,087 + -0.6
407,215 + +0.1
407,223 - -0.3
407,223 - +0.2
407,229 + -0.6
407,229 + -0.6
407,229 + -0.7
407,229 + +0.7
407,229 + -0.2
407,229 + -0.1
407,237 - -0.7
407,237 - -0.6
407,237 - +0.5
407,237 - +1.2
407,237 - -0.5
407,237 - +0.0
407,237 - -0.1
407,255 + +0.5
407,418 + B158DRAFT_0401 0.36 -0.4
407,453 + B158DRAFT_0401 0.43 +1.3
407,477 + B158DRAFT_0401 0.48 -0.8
407,504 + B158DRAFT_0401 0.54 -0.8
407,510 + B158DRAFT_0401 0.55 -1.3
407,511 + B158DRAFT_0401 0.55 -0.9
407,523 + B158DRAFT_0401 0.58 -0.3
407,523 + B158DRAFT_0401 0.58 -1.5
407,523 + B158DRAFT_0401 0.58 -1.1
407,523 + B158DRAFT_0401 0.58 +0.5
407,523 + B158DRAFT_0401 0.58 -0.2
407,523 + B158DRAFT_0401 0.58 +0.2
407,523 + B158DRAFT_0401 0.58 -0.1
407,526 - B158DRAFT_0401 0.58 -0.8
407,531 - B158DRAFT_0401 0.59 -0.4
407,531 - B158DRAFT_0401 0.59 -0.6
407,531 - B158DRAFT_0401 0.59 -0.7
407,531 - B158DRAFT_0401 0.59 +0.0
407,531 - B158DRAFT_0401 0.59 -1.4
407,712 - +0.1
407,742 + -0.2
407,745 - -0.5
407,755 + +0.0
407,755 + -0.4
407,755 + +0.5
407,755 + -0.1
407,763 - +1.4
407,763 - -0.1
407,777 + -0.1
407,777 + +0.0
407,785 - -1.1
407,786 - -0.4
407,859 - +0.6
407,859 - -0.8
407,895 + -1.6
407,957 + -0.4
408,012 + -0.9
408,012 + +0.5
408,106 + B158DRAFT_0402 0.20 -0.0
408,106 + B158DRAFT_0402 0.20 -2.0
408,119 + B158DRAFT_0402 0.21 +0.5
408,119 + B158DRAFT_0402 0.21 -0.0
408,119 + B158DRAFT_0402 0.21 -0.9
408,127 - B158DRAFT_0402 0.22 +0.2
408,127 - B158DRAFT_0402 0.22 -0.1
408,127 - B158DRAFT_0402 0.22 -0.3
408,132 - B158DRAFT_0402 0.23 -0.0
408,132 - B158DRAFT_0402 0.23 -0.6
408,209 + B158DRAFT_0402 0.32 -0.2
408,219 + B158DRAFT_0402 0.33 -0.2
408,260 + B158DRAFT_0402 0.38 +0.4
408,268 - B158DRAFT_0402 0.39 -1.1
408,289 - B158DRAFT_0402 0.42 -0.2
408,299 - B158DRAFT_0402 0.43 -0.0
408,328 + B158DRAFT_0402 0.46 +0.7
408,328 + B158DRAFT_0402 0.46 -0.7
408,328 + B158DRAFT_0402 0.46 -1.1
408,328 + B158DRAFT_0402 0.46 +1.0
408,336 - B158DRAFT_0402 0.47 -1.9
408,336 - B158DRAFT_0402 0.47 -0.7
408,336 - B158DRAFT_0402 0.47 -0.5
408,338 + B158DRAFT_0402 0.47 -1.1
408,338 + B158DRAFT_0402 0.47 +0.1
408,346 - B158DRAFT_0402 0.48 -0.8
408,381 - B158DRAFT_0402 0.52 -0.1
408,399 + B158DRAFT_0402 0.55 +0.2
408,404 + B158DRAFT_0402 0.55 -0.5
408,407 - B158DRAFT_0402 0.56 +0.6
408,414 + B158DRAFT_0402 0.56 -0.5
408,422 - B158DRAFT_0402 0.57 -0.6
408,448 - B158DRAFT_0402 0.60 -0.1
408,530 + B158DRAFT_0402 0.70 +0.4
408,537 + B158DRAFT_0402 0.71 -0.3
408,583 + B158DRAFT_0402 0.76 -0.9
408,589 + B158DRAFT_0402 0.77 -0.3
408,591 - B158DRAFT_0402 0.77 +0.6
408,597 - B158DRAFT_0402 0.78 -0.0
408,611 + B158DRAFT_0402 0.80 +0.0
408,611 + B158DRAFT_0402 0.80 +0.0
408,619 - B158DRAFT_0402 0.81 -1.3
408,619 - B158DRAFT_0402 0.81 +0.2
408,619 - B158DRAFT_0402 0.81 -0.8
408,759 + -0.4
408,759 + -0.5
408,759 + -0.1
408,759 + -0.1
408,764 + +0.0
408,764 + -0.0
408,767 - -0.6
408,767 - -0.6
408,772 - -0.7
408,776 + -0.2
408,784 - -0.6
408,784 - +0.0
408,838 - +0.4
408,881 + -0.4
408,881 + -0.2
408,881 + +0.1
408,888 + -1.1
408,896 - +0.6
408,896 - +0.3
408,896 - -0.3
408,920 + +0.5
408,920 + -0.5
408,920 + -0.0
408,928 - +0.3
408,937 - +0.7
409,146 + B158DRAFT_0403 0.29 -0.1
409,154 - B158DRAFT_0403 0.31 +0.5
409,154 - B158DRAFT_0403 0.31 +0.5
409,176 - B158DRAFT_0403 0.35 +0.3
409,178 + B158DRAFT_0403 0.35 +0.3
409,178 + B158DRAFT_0403 0.35 -0.4
409,178 + B158DRAFT_0403 0.35 -0.5
409,178 + B158DRAFT_0403 0.35 -0.6
409,178 + B158DRAFT_0403 0.35 -0.7
409,178 + B158DRAFT_0403 0.35 +1.4
409,182 + B158DRAFT_0403 0.36 +0.5
409,183 + B158DRAFT_0403 0.36 -0.5
409,183 + B158DRAFT_0403 0.36 -0.5
409,183 + B158DRAFT_0403 0.36 -1.2
409,186 - B158DRAFT_0403 0.36 +0.5
409,186 - B158DRAFT_0403 0.36 -0.2
409,186 - B158DRAFT_0403 0.36 +0.3
409,204 + B158DRAFT_0403 0.40 +1.1
409,212 - B158DRAFT_0403 0.41 +1.3
409,212 - B158DRAFT_0403 0.41 +1.9
409,270 + B158DRAFT_0403 0.51 -0.0
409,270 + B158DRAFT_0403 0.51 -0.3
409,270 + B158DRAFT_0403 0.51 +0.4
409,270 + B158DRAFT_0403 0.51 +1.3
409,270 + B158DRAFT_0403 0.51 +0.0
409,279 + B158DRAFT_0403 0.53 -1.0
409,376 + B158DRAFT_0403 0.70 -0.4
409,420 + B158DRAFT_0403 0.78 -0.6
409,420 + B158DRAFT_0403 0.78 -0.4
409,430 + B158DRAFT_0403 0.80 -1.0
409,447 + B158DRAFT_0403 0.83 -1.0
409,522 + -0.7
409,545 + -0.9

Or see this region's nucleotide sequence