Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0145

Experiment: m.b. Thallium(I) acetate 0.015625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0143 and B158DRAFT_0144 are separated by 72 nucleotidesB158DRAFT_0144 and B158DRAFT_0145 are separated by 288 nucleotidesB158DRAFT_0145 and B158DRAFT_0146 are separated by 47 nucleotidesB158DRAFT_0146 and B158DRAFT_0147 are separated by 160 nucleotides B158DRAFT_0143: B158DRAFT_0143 - hypothetical protein, at 141,737 to 142,549 _0143 B158DRAFT_0144: B158DRAFT_0144 - Carbonic anhydrase, at 142,622 to 143,254 _0144 B158DRAFT_0145: B158DRAFT_0145 - chaperonin GroL, at 143,543 to 145,183 _0145 B158DRAFT_0146: B158DRAFT_0146 - Co-chaperonin GroES (HSP10), at 145,231 to 145,521 _0146 B158DRAFT_0147: B158DRAFT_0147 - Protein affecting phage T7 exclusion by the F plasmid, at 145,682 to 146,206 _0147 Position (kb) 143 144 145 146Strain fitness (log2 ratio) -2 -1 0 1at 142.611 kb on - strandat 142.726 kb on - strand, within B158DRAFT_0144at 142.728 kb on + strand, within B158DRAFT_0144at 142.736 kb on - strand, within B158DRAFT_0144at 142.736 kb on - strand, within B158DRAFT_0144at 142.762 kb on - strand, within B158DRAFT_0144at 142.839 kb on + strand, within B158DRAFT_0144at 142.868 kb on - strand, within B158DRAFT_0144at 142.938 kb on + strand, within B158DRAFT_0144at 142.947 kb on - strand, within B158DRAFT_0144at 142.994 kb on + strand, within B158DRAFT_0144at 142.996 kb on + strand, within B158DRAFT_0144at 143.156 kb on + strand, within B158DRAFT_0144at 143.164 kb on - strand, within B158DRAFT_0144at 143.164 kb on - strand, within B158DRAFT_0144at 143.219 kb on - strandat 143.331 kb on + strandat 143.382 kb on + strandat 143.400 kb on + strandat 143.400 kb on + strandat 143.408 kb on - strandat 143.491 kb on - strandat 145.630 kb on + strandat 145.632 kb on + strandat 145.745 kb on + strand, within B158DRAFT_0147at 145.784 kb on - strand, within B158DRAFT_0147at 145.818 kb on + strand, within B158DRAFT_0147at 145.826 kb on - strand, within B158DRAFT_0147at 145.860 kb on + strand, within B158DRAFT_0147at 145.880 kb on - strand, within B158DRAFT_0147at 145.900 kb on + strand, within B158DRAFT_0147at 145.900 kb on + strand, within B158DRAFT_0147at 145.937 kb on + strand, within B158DRAFT_0147at 146.003 kb on + strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.101 kb on + strand, within B158DRAFT_0147at 146.101 kb on + strand, within B158DRAFT_0147at 146.109 kb on - strand, within B158DRAFT_0147

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.015625 mg/ml
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142,611 - -0.3
142,726 - B158DRAFT_0144 0.16 +0.2
142,728 + B158DRAFT_0144 0.17 -0.2
142,736 - B158DRAFT_0144 0.18 -0.2
142,736 - B158DRAFT_0144 0.18 -0.6
142,762 - B158DRAFT_0144 0.22 -0.6
142,839 + B158DRAFT_0144 0.34 -0.5
142,868 - B158DRAFT_0144 0.39 +0.0
142,938 + B158DRAFT_0144 0.50 -0.1
142,947 - B158DRAFT_0144 0.51 -0.3
142,994 + B158DRAFT_0144 0.59 -0.4
142,996 + B158DRAFT_0144 0.59 -0.4
143,156 + B158DRAFT_0144 0.84 -0.0
143,164 - B158DRAFT_0144 0.86 +0.3
143,164 - B158DRAFT_0144 0.86 +0.0
143,219 - -0.7
143,331 + +0.2
143,382 + -1.2
143,400 + -0.7
143,400 + +0.4
143,408 - -0.8
143,491 - +0.5
145,630 + +0.6
145,632 + +1.5
145,745 + B158DRAFT_0147 0.12 -0.7
145,784 - B158DRAFT_0147 0.19 -1.2
145,818 + B158DRAFT_0147 0.26 -1.3
145,826 - B158DRAFT_0147 0.27 -0.6
145,860 + B158DRAFT_0147 0.34 -0.8
145,880 - B158DRAFT_0147 0.38 -0.8
145,900 + B158DRAFT_0147 0.42 -2.2
145,900 + B158DRAFT_0147 0.42 -2.0
145,937 + B158DRAFT_0147 0.49 -2.4
146,003 + B158DRAFT_0147 0.61 -1.6
146,054 - B158DRAFT_0147 0.71 -1.2
146,054 - B158DRAFT_0147 0.71 -1.0
146,054 - B158DRAFT_0147 0.71 -0.8
146,101 + B158DRAFT_0147 0.80 -1.8
146,101 + B158DRAFT_0147 0.80 -0.4
146,109 - B158DRAFT_0147 0.81 -1.7

Or see this region's nucleotide sequence